GENSCAN 1.0	Date run:  6-Nov-116	Time: 06:12:10

Sequence gi568815590f:7333977_7438704 : 104728 bp : 42.04% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Sngl +   3139   4731 1593  0  0  109   43  1192 0.991 111.89
 1.02 PlyA +   5509   5514    6                               1.05

 2.00 Prom +   6430   6469   40                             -12.72
 2.01 Init +   7850   8080  231  1  0  111   44   237 0.963  19.91
 2.02 Term +   8628   9050  423  2  0   50   38   396 0.868  25.11
 2.03 PlyA +   9076   9081    6                               1.05

 3.00 Prom +  19515  19554   40                              -4.95
 3.01 Init +  20670  20750   81  2  0   65   80    96 0.876   7.52
 3.02 Term +  22392  22682  291  2  0   25   55   158 0.313   0.56
 3.03 PlyA +  23446  23451    6                               1.05

 4.10 PlyA -  23699  23694    6                               1.05
 4.09 Term -  24584  24000  585  2  0   35   44   333 0.982  17.12
 4.08 Intr -  25725  25643   83  1  2   64  115    24 0.985   1.14
 4.07 Intr -  26356  26261   96  2  0   84   82    49 0.875   2.96
 4.06 Intr -  27260  27134  127  2  1   45  109   158 0.824  12.93
 4.05 Intr -  33609  33501  109  2  1   91    6    48 0.437  -3.73
 4.04 Intr -  33903  33786  118  1  1   27  115   124 0.056   7.60
 4.03 Intr -  38611  38446  166  1  1   85   64    81 0.011   4.01
 4.02 Intr -  45603  45547   57  0  0   83   86    42 0.045   1.66
 4.01 Init -  46699  46499  201  1  0   60   80    90 0.084   4.32
 4.00 Prom -  49746  49707   40                              -6.05

 5.00 Prom +  61237  61276   40                              -6.45
 5.01 Sngl +  62060  62371  312  1  0   84   53   294 0.972  21.18
 5.02 PlyA +  63304  63309    6                               1.05

 6.08 PlyA -  63383  63378    6                               1.05
 6.07 Term -  69023  68949   75  2  0  108   54    65 0.552   1.96
 6.06 Intr -  69346  69241  106  0  1   70   65    72 0.467   2.40
 6.05 Intr -  70961  70843  119  2  2    3  109   157 0.966   7.64
 6.04 Intr -  80608  80472  137  2  2   27   92    48 0.094  -1.53
 6.03 Intr -  81045  80926  120  1  0   51   11   134 0.203   1.55
 6.02 Intr -  83338  83227  112  1  1   70  109    93 0.829   8.63
 6.01 Init -  83828  83721  108  2  0   95  -22   127 0.793   2.67
 6.00 Prom -  84239  84200   40                              -8.45

 7.00 Prom +  84767  84806   40                             -11.44
 7.01 Init +  85030  85225  196  0  1   63   72    92 0.928   4.24
 7.02 Intr +  85248  85415  168  1  0   13   20   230 0.572   7.70
 7.03 Intr +  85570  85833  264  2  0    4   37   324 0.548  15.46
 7.04 Intr +  85896  86075  180  1  0    2   81   153 0.737   4.92
 7.05 Intr +  86383  86556  174  2  0  -15   22   198 0.547   1.89
 7.06 Term +  88751  88923  173  0  2   86   39   130 0.977   4.91
 7.07 PlyA +  89156  89161    6                               1.05

 8.05 PlyA -  89858  89853    6                               1.05
 8.04 Term -  94854  94717  138  0  0   84   45    55 0.201  -2.22
 8.03 Intr -  95153  94946  208  1  1  107   32   199 0.342  14.36
 8.02 Intr -  96182  96097   86  2  2   33  110    47 0.292  -0.90
 8.01 Intr - 101407 101314   94  0  1   86   73    89 0.722   6.25

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590f:7333977_7438704|GENSCAN_predicted_peptide_1|530_aa
MGDDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSSETRVDLCDDLAPVAR
QLAPREKLPLSSRRPAAVGAGLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTCQRP
KCCMLCTMQAHITWALHSPGHVIQPSQALAAGFHRGKQEDVHEFLMFTVDAMKKACLPGH
KQVDHHSKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQL
VKPEELNGENAYHCGLCLQRAPASNTLTLHTSAKVLILVLKRFSDVAGNKLAKNVQYPEC
LDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHDGYYFSYVKAQEGQWYKMDDAEVTVCSIT
SVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRPATQGELKRDHPCLQVPEL
DEHLVERATEESTLDHWKFPQEQNKMKPEFNVRKVEGTLPPNVLVIHQSKYKCGMKNHHP
EQQSSLLNLSSMNSTDQESMNTGTLASLQGRTRRSKGKNKHSKRSLLVCQ

>gi568815590f:7333977_7438704|GENSCAN_predicted_CDS_1|1593_bp
atgggggacgactcactctacttgggaggtgagtggcagttcaaccacttttcaaaactc
acatcttctcggccagatgcagcttttgctgaaatccagcggacttctctccctgagaag
tcaccactctcatctgagacccgtgtcgacctctgtgatgatttggctcctgtggcaaga
cagctcgctcccagggagaagcttcctctgagtagcaggagacctgctgcggtgggggct
gggctccagaatatgggaaatacctgctacgagaacgcttccctgcagtgcctgacatac
acactgccccttgccaactacatgctgtcccgggagcactctcaaacatgtcagcgtccc
aagtgctgcatgctctgtactatgcaagctcacatcacatgggccctccacagtcctggc
catgtcatccagccctcacaggcattggctgctggcttccatagaggcaagcaggaagat
gtccatgaatttctcatgttcactgtggatgccatgaaaaaggcatgccttcccggccac
aagcaggtagatcatcactctaaggacaccaccctcatccaccaaatatttggaggctgc
tggagatctcaaatcaagtgtctccactgccacgggatttcagacacttttgacccttac
ctggacatcgccctggatatccaggcagctcagagtgtcaagcaagctttggaacagttg
gtgaagcccgaagaactcaatggagagaatgcctatcattgcggtctttgtctccagagg
gcgccggcctccaacacgttaactttacacacttctgccaaggtcctcatccttgtcttg
aagagattctccgatgtcgcaggcaacaaacttgccaagaatgtgcaatatcctgagtgc
cttgacatgcagccatacatgtctcagcagaacacaggacctcttgtctatgtcctctat
gctgtgctggtccacgctgggtggagttgtcacgacggatattacttctcttatgtcaaa
gctcaagaaggccagtggtataaaatggatgatgccgaggtcactgtctgtagcatcact
tctgtcctgagtcaacaggcctatgtcctcttttacatccagaagagtgaatgggaaaga
cacagtgagagtgtgtcaagaggcagggaaccaagagcccttggcgctgaagacacagac
aggccagcaacgcaaggagagctcaagagagaccacccttgcctccaggtacccgagttg
gacgagcacttggtggaaagagccactgaggaaagcaccttagaccactggaaattcccc
caagagcaaaacaaaatgaagcctgagttcaacgtcagaaaagttgaaggtaccctgcct
cccaacgtacttgtgattcatcaatcaaaatacaagtgtgggatgaaaaaccaccatcct
gaacagcaaagctccctgctaaacctctcttcgatgaactcgacagatcaggagtccatg
aacactggcacactcgcttctctgcaagggaggaccaggagatccaaagggaagaacaaa
cacagcaagagatctctgcttgtgtgccagtga

>gi568815590f:7333977_7438704|GENSCAN_predicted_peptide_2|217_aa
MEDDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSSETRVDLCDDLAPVTR
QLAPREKLPPSSRRPAAKAPAAKTLTLHTSAKVLILVLKRFSDVTGNRLAKNVQYPECVD
MQPYMSQQNTGPLFYVLYAVLIVTGWSCHNGHYFSCVKAQEGQWYKMDDAEVTASGITSP
LSQQAYVLFYIQKNEFGRPSYRVSAGREPRALCAEDN

>gi568815590f:7333977_7438704|GENSCAN_predicted_CDS_2|654_bp
atggaggacgactcactctacttgggaggtgagtggcagttcaaccacttttcaaaactc
acatcttctcggccagatgcagcttttgctgaaatccagcggacttctctccctgagaag
tcaccactctcatcggagacccgtgtcgacctctgtgacgatttggctcctgtgacaaga
cagcttgctcccagggagaagcttcctccgagtagcaggagacctgctgcgaaggcgcct
gccgccaagacgttaactttacacacttctgccaaggtcctcatccttgtcttgaagaga
ttctccgatgtcacaggcaacagacttgccaagaatgtgcaatatcctgagtgcgttgac
atgcagccatacatgtctcagcagaacacaggacctcttttctatgtcctctatgctgtt
ctcatcgtcaccgggtggagttgtcacaacggacattacttctcttgtgtcaaagctcaa
gaaggccagtggtataaaatggatgatgccgaggtcactgcctctggtatcacttctcct
ttgagtcaacaggcctatgtcctcttttacatccagaagaatgaatttggaagacccagt
tacagggtgtccgcaggcagggaaccaagagctctttgtgctgaagacaattga

>gi568815590f:7333977_7438704|GENSCAN_predicted_peptide_3|123_aa
MNDNNNNNDDLSDNATNTVNGNNNKPELERLQGQNFKSLLRDRREELPYSLIPVNCLETE
ERAADTQMHIQGVFDTASISLLNLCNDTLRNLASGAEDPWCVNSRVGWKQVVLVDVEVKG
GEL

>gi568815590f:7333977_7438704|GENSCAN_predicted_CDS_3|372_bp
atgaatgacaataataacaacaatgatgatcttagtgataatgccaccaacactgttaat
ggcaataacaataaacctgagttagagaggctccagggacaaaatttcaagagtcttctg
agggatagaagagaagagctgccttattctctgatcccagttaactgcctagagacagag
gaaagggctgcggacacccaaatgcatatacaaggtgtctttgatacagcctccatttcc
ctgctaaatctatgcaatgacacactgagaaatctagcaagtggggctgaagatccctgg
tgtgtcaactcgagggttggatggaaacaagtggttttagtggacgttgaagtaaaggga
ggtgagctgtga

>gi568815590f:7333977_7438704|GENSCAN_predicted_peptide_4|513_aa
MCSISNCSSHSRSTLVTPDGMCRHQQSWQHDGQSSPQAFTWCKYVGTGDSCDGRLGSPIL
KLSGDTQRFLITLLLNSSALFHALFKDKAIFLRTEEGVESCGYLFSNPLHQVEQNNSERP
PHVEAGGLDLGSRSLDLLLTGVEEIPVTGSIAAWVHKQLQSLPPRRKNSTEGHTVEKETE
RESFRHAQCFPYPLKLSMHVVFRELYACPSEAFFPFPKKLTFEDVAIDFTQEEWAMMDTS
KRKLYRDVMLENISHLVSLGYQISKSYIILQLEQGKELWREGRVFLQDQNPNRESALKKT
HMISMHPITRKDASTSMTMENSLILEDPFECNDSGEDCTRSSTITQCLLTHSGKKPYVSK
QCGKSLRNLLSTEPHKQIHTKGKSYQCNLCEKAYTNCFHLRRHKMTHTGERPYACHLCRK
AFTQCSHLRRHEKTHTGQRPYKCHQYGKVFIQSFNLQRHERTHLGKKCYECDKSGKAFSQ
SSGFRGNKIIHTGEKPHACLLCGKAFSLSSNLR

>gi568815590f:7333977_7438704|GENSCAN_predicted_CDS_4|1542_bp
atgtgtagcatcagcaattgcagtagtcatagcaggtcaactctcgtgaccccagatggc
atgtgcagacaccaacagtcatggcaacatgatggacagagtagtcctcaggctttcacc
tggtgcaaatatgtgggcactggtgacagctgtgatggcaggctgggaagtcctatcctt
aagctctcaggagacacacagagattcctcatcactttgctgctgaattctagtgccctc
tttcatgccctcttcaaggacaaggctatattcctcagaactgaggagggagttgaatca
tgtggctatttattctcaaatcctcttcaccaagtggaacaaaacaacagcgaaagacca
ccgcacgtggaggcaggaggtttggatttgggttctagatctctagatctattactaact
ggagtagaagagattccagttactggcagcatagctgcatgggtccataagcaacttcag
tccttgcctcctagaagaaagaattcgaccgaagggcatacagtggaaaaagagactgag
cgggagagtttccggcatgcacagtgctttccttaccctttgaaattgagcatgcacgtt
gtgtttagggagttatatgcatgtccatctgaagctttctttccttttccgaagaaactg
acttttgaagatgtagctattgacttcacccaggaagagtgggccatgatggacacatcc
aagagaaagctgtacagagatgtgatgctggaaaatatcagtcacctggtgtccctcggg
taccagataagcaaatcctatataattttgcagctggagcaaggaaaagagctgtggagg
gaaggaagagtatttcttcaagaccagaatccaaacagggaaagtgcccttaagaaaaca
cacatgatatccatgcatcctatcaccagaaaagacgcatccaccagtatgacaatggag
aactctctcattctggaggatccttttgaatgtaatgattcgggagaagattgcactcgc
agttccacaataactcagtgtttgttaactcatagtggaaagaaaccctatgtcagcaaa
cagtgtggaaaatcccttcgtaatcttttgtccactgaaccacataaacaaattcatact
aaaggtaaatcatatcagtgtaatctatgtgaaaaggcctatactaattgctttcacctt
agacggcacaagatgactcacactggagagaggccatatgcatgtcatctatgtagaaaa
gccttcactcagtgttctcaccttagaagacacgagaaaactcacacgggacagagacca
tataagtgtcatcaatatgggaaagtctttattcaatcctttaaccttcaaagacatgag
agaactcaccttggaaaaaagtgttatgaatgtgataaaagtgggaaagcctttagtcaa
agctctggctttagaggaaacaaaataattcacactggagagaaaccacatgcttgtctt
ctatgtgggaaggccttcagtctgtcttccaaccttagatga

>gi568815590f:7333977_7438704|GENSCAN_predicted_peptide_5|103_aa
MEQAHEQSGYEGGQGGQAQAQGHEGHMLELAALSTGALERPRHISTGKEDGNGPGWEVAA
AAAGVLSPGVKGGSLCGRSTDTSVPVHSQSHPWSFCTNIYPLT

>gi568815590f:7333977_7438704|GENSCAN_predicted_CDS_5|312_bp
atggagcaggcacatgagcagagtggctatgaggggggacaaggtgggcaggctcaggcc
cagggacatgaaggccacatgttggagcttgctgccctgagcacgggtgctttggagcgg
cccaggcacatctcgactgggaaggaagatggcaacggaccaggatgggaggtggcagcc
gcagcagcaggtgtcctcagccctggggtgaaaggagggtctctgtgtggacgcagcact
gacacctctgtgcctgtgcattctcagagtcatccttggagcttctgcacgaatatctac
cccctgacctga

>gi568815590f:7333977_7438704|GENSCAN_predicted_peptide_6|258_aa
MGLLHKCFPSPTGRPRGGLAAPLGASPPNPKGSDADELNVRAMDRIRWKELSIWPETVPR
YSGKTGRRTEWAAEGINKLAPVVSLEQNAAKSHEEAKKLLWLMRIQKGLPHQRPSPTQRP
VPSWNHSGSAKGGDAQSSVLHKDSLLLAKVSYAIMPPTEGASEAIGQCQSSATKRRRSLK
ESVREPWARVPGAVGMAARKAGLAAKGEGEGVEGYLPLSQKSREGVETRREGVEKMKGIE
IKRRERLKSGKEKVVEGQ

>gi568815590f:7333977_7438704|GENSCAN_predicted_CDS_6|777_bp
atggggctccttcataagtgtttcccatcaccaacagggagaccacgtggaggccttgca
gccccactcggtgcttctccaccaaatcccaagggcagtgacgctgacgagctgaatgtc
cgagcaatggatagaattagatggaaagagctctcaatttggcctgagactgtccccaga
tactcaggaaaaacaggacgtcgcacagagtgggcagcagaaggtataaacaaattggca
cctgtggtctccctggaacaaaatgctgcaaaaagccatgaggaggccaagaagctgctg
tggctgatgcggattcagaaagggctccctcatcagagaccaagcccaactcaaagacca
gttccctcatggaatcatagtggatctgccaagggaggggatgcccagtcctctgttctt
cacaaggactcccttcttctggctaaggtttcttatgcaattatgcctcctacagagggg
gcttctgaggcgatcgggcagtgtcagtcttcagccactaagcggagaagatctctgaag
gagtcagtcagagagccttgggccagagttccaggggctgtgggaatggctgccagaaaa
gcgggacttgccgctaagggtgaaggagaaggggttgaagggtacttgcccctctcccag
aaaagcagagaaggggtagagacaaggcgagaaggagttgagaaaatgaaaggaattgaa
attaagagaagggagagattgaagagtggaaaggagaaagtggttgagggacagtga

>gi568815590f:7333977_7438704|GENSCAN_predicted_peptide_7|384_aa
MGPKGRTVIIEHSWGSPKVTKDGVTDAKSIDLKDKYKSIGAKLVQDVANNTDEETGGWHY
HCCCTGFQKVSKGANPVEIKRGVMLAVDAVIAELKKQSKPVTKPEEIAQVATISANGDKE
IGEKCEFQDAYVLLHEKKISSVQSIVTALEIANAYCKPLVIIAGDIDGEALTTLILNRLK
VGLQVVAVKAPGFGDNRKNQLKDTVIATGGEVGEVTVIKDYAMLLKGKGNKSQIEKCVQE
IIDQSDVTTSEYEKEKVSGETFRWSSCAEGDVVNMVEKDIIDPTKVVRTASLDAAGMASL
LTTAAVVVTEIPKEGNSPGMGAMCGMGESSLELLHKDLPPDLSTRTGTIGAQIANWEERS
TKQKCAHGHCNKVYQEVLGILQRV

>gi568815590f:7333977_7438704|GENSCAN_predicted_CDS_7|1155_bp
atggggccaaagggaagaacagtaattattgaacatagctggggaagtcccaaagtaaca
aaagatggtgtgactgatgcaaagtcaattgacttaaaggataaatataaaagcattgga
gctaaacttgtccaagatgttgccaataacacagatgaagagactgggggatggcactat
cactgctgctgtactggcttccagaaggttagcaaaggtgctaatccagtggaaatcaag
agaggtgtgatgttagctgttgatgctgtaattgctgaacttaaaaagcagtctaaacct
gtgaccaaacctgaagaaattgcacaggttgctacaatttctgcaaatggagacaaagaa
attggtgagaaatgtgaattccaggatgcctatgttctgttgcatgaaaagaaaatttct
agtgtccagtccattgtaactgctcttgaaattgccaatgcttactgtaagcctttggtc
ataattgctggagacattgatggagaagctctaactacactcatcctgaataggctaaag
gttggtcttcaggttgtggcagtcaaagctccagggtttggtgacaatagaaagaaccag
cttaaagatacggttattgctactggtggagaagttggagaggtcactgtgatcaaagat
tatgccatgctcttaaaaggaaaaggtaacaagtctcaaattgaaaaatgtgttcaagaa
atcattgaccagtcagatgtcacaactagtgaatacgaaaaggaaaaagtgagtggagaa
actttcagatggagtagctgtgctgaaggagatgtcgtgaatatggtggaaaaagacatt
attgacccaacaaaggttgtgagaactgcttcattggatgctgctggcatggcctctcta
ttaactacagcagctgttgtagtcacagaaattcctaaagaagggaacagccctggaatg
ggtgcaatgtgtggaatgggagagtcatccttggagcttctgcacaaagatttaccccct
gacctgagcaccaggacaggaaccataggtgctcagatagcaaactgggaggagagaagc
acaaaacaaaagtgtgcccatggacattgcaataaagtataccaggaagttcttggaatt
cttcagagagtttag

>gi568815590f:7333977_7438704|GENSCAN_predicted_peptide_8|175_aa
XWLWHSGLPLSPTGIRNTADLSSALGLLAFCLSQRGVKPSSYEDPLSSVCFALPVFGACS
RSWRNHKHITEILLQSQRRPVCCAQLPSKGGTDRQVLDAWPKMLPKKEIKTLKHDESVVK
CGNAFLKFIKTTQKILRTHLSFKESRISGEIYKGAQPYYPRVIRFYSYFVNVMPQ

>gi568815590f:7333977_7438704|GENSCAN_predicted_CDS_8|528_bp
nnatggctctggcactcaggtctgcctctttctcccactggcatccgaaacacagcagac
ctgagttcagctcttggtcttctggccttctgtctctctcagcgtggggtgaagcctagc
agctatgaggatccattatcttctgtttgctttgctcttcctgtttttggtgcctgttcc
aggtcatggaggaatcataaacacattacagaaatattattgcagagtcagaggcggccg
gtgtgctgtgctcagctgccttccaaaggaggaacagatcggcaagtgctcgacgcgtgg
ccgaaaatgctgccgaagaaagaaataaaaaccctgaaacatgacgagagtgttgtaaag
tgtggaaatgccttcttaaagtttataaaaacaactcagaaaatcttaaggactcacctt
tcgttcaaagaaagtagaatctctggagaaatctataagggagcccaaccttattatcca
agggttatcaggttctattcctactttgtgaacgttatgccccagtga