GENSCAN 1.0	Date run:  8-Nov-116	Time: 11:40:20

Sequence gi568815590f:39484623_39710730 : 226108 bp : 34.38% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init -   7349   7203  147  2  0   80   88   131 0.784  12.44
 1.00 Prom -  10652  10613   40                              -4.45

 2.00 Prom +  25217  25256   40                              -3.55
 2.01 Init +  38216  38411  196  1  1   79   79   167 0.192  13.09
 2.02 Intr +  59673  59762   90  1  0   79   81    26 0.002   0.05
 2.03 Intr +  73370  73497  128  0  2   80   76     6 0.000  -1.92
 2.04 Intr +  90884  91016  133  1  1   35  107   101 0.005   6.00
 2.05 Term + 100212 100405  194  1  2   47   42   223 0.522  10.20
 2.06 PlyA + 101174 101179    6                               1.05

 3.00 Prom + 105491 105530   40                              -3.65
 3.01 Init + 119882 119923   42  1  0   76  101    49 0.175   5.53
 3.02 Intr + 124863 124939   77  2  2   72   90    27 0.031  -1.31
 3.03 Intr + 125907 126084  178  0  1   89   62    61 0.031   2.60
 3.04 Intr + 128344 128490  147  0  0   56   88    83 0.033   4.61
 3.05 Intr + 152642 152713   72  1  0   54   93    60 0.083   1.78
 3.06 Intr + 160716 160852  137  2  2   85   47    82 0.316   2.25
 3.07 Intr + 163722 163905  184  0  1   50   82   132 0.186   7.67
 3.08 Intr + 183376 183574  199  0  1  103   67   106 0.942   8.00
 3.09 Term + 187675 187781  107  2  2   84   35    98 0.807   1.69
 3.10 PlyA + 187915 187920    6                              -1.95

 4.06 PlyA - 188712 188707    6                               1.05
 4.05 Term - 189357 189056  302  1  2   26   41   185 0.251   2.00
 4.04 Intr - 191170 190820  351  2  0   43   41   211 0.139   6.27
 4.03 Intr - 200868 200707  162  1  0   82   75    98 0.087   6.93
 4.02 Intr - 201926 201793  134  1  2   53  103    90 0.468   6.37
 4.01 Init - 204409 204309  101  1  2   72   50    63 0.365   0.68
 4.00 Prom - 217354 217315   40                              -5.85

 5.00 Prom + 218428 218467   40                              -3.65
 5.01 Init + 219661 219770  110  0  2   24   81   127 0.939   5.34
 5.02 Intr + 222168 222282  115  0  1  115  119    44 0.910   9.73

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  92108  92007  102  2  0   48  110   130 0.891  11.49
S.002 Init + 100001 100055   55  1  1   58  115    50 0.908   5.35
S.003 Init - 128572 128407  166  1  1   64   89   146 0.920  12.16


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590f:39484623_39710730|GENSCAN_predicted_peptide_1|49_aa
MDGFKRIVLQPELKCFQDKTVSKMTYRKSSTCGNGILEPTEQCDCGYKE

>gi568815590f:39484623_39710730|GENSCAN_predicted_CDS_1|147_bp
atggatggatttaaacggatagttctgcagcctgaacttaaatgttttcaggataaaaca
gtttcaaaaatgacttaccgaaaatcttcaacttgtggcaatggaattttggaacctaca
gagcagtgtgattgtggctataaagag

>gi568815590f:39484623_39710730|GENSCAN_predicted_peptide_2|246_aa
MAVVLGTAAARGQGGGGRAERKGRGVRGARRGPSSVDPEAGGSYSPARPPTVGCTGGGTW
EPAFLGAWCKLSVDLPFWGLEDGGSLLKAPLGSAQVAQGAPYLCSQEVNLHANNFGNCKT
SSYNFEYTFLNVYIFLTLILLLDFTMAINPKTNVNLFYTVLHQKTAVVAATVTAVVTATS
HRGQGELKALAEDLLALCISAHGLSGPHAVRLLASSHSVKEGGGGGVLTAFSELLRVLRK
QVSHRF

>gi568815590f:39484623_39710730|GENSCAN_predicted_CDS_2|741_bp
atggccgttgtccttggaacggctgcagctcgaggccagggtggtggaggccgagcggag
cggaagggccgtggggtccgcggggcgcggcggggacccagctccgtggatcccgaggcg
ggtggatcctacagccccgcgcgcccacccacagtgggctgcaccggaggaggcacgtgg
gagcctgcatttctgggtgcatggtgtaagctgtcagtggatctgccattctggggtctg
gaggatggtggctctcttctcaaagctccactaggtagtgcccaagttgctcagggtgct
ccttatctgtgttcacaagaagtgaatttgcatgccaacaattttggaaactgtaaaact
agttcctataatttcgagtacacatttttaaacgtatacatttttctaacgttgattttg
cttcttgattttacaatggctattaaccctaaaaccaatgttaatctcttttatacggtt
ctacatcagaagacagcagtagtagcagcaacagtaacagcagtagtgacagcaaccagt
catagaggccagggggaactaaaggccttagcggaggacctgttagcgctctgcatcagc
gcccatggtctcagtggcccacacgcagtgcgtcttctggcatcttcccactctgtgaag
gagggtggaggtggtggagtactaactgccttcagcgaactcctcagagtcctgaggaag
caagtctctcatcgattctaa

>gi568815590f:39484623_39710730|GENSCAN_predicted_peptide_3|380_aa
MGVDPSWLGAVLAMMHCHYQGYAAEFPNSFVTLSICSGLRGFLQFENISYGIEPVESSAR
FEHIIYQMKNNDPNVSILAVNYSHIWQKDQPYKVPLNSQPHPCQYMYTCRPHRATTARTH
LDAWTPPCLPVAAAMHACIEPNMPLPPQYDYMGSEMMAVTQKIVQVIGLVNTYPDAIGLE
GFSVIIAQLLGLNVGLTYDDITQCFCLRATCIMNHEAVSASGRKIFSNCSMHDYRYFVSK
FETKCLQKLSNLQPLHQNQPVCGNGILESNEECDCGNKNLSIAGTPCRKSIDPECDFTEY
CNGTSSNCVPDTYALNGRLCKLGTAYCYNGQCQTTDNQCAKIFGKGQSGNATTLTGSNGY
DKIWKNQDQIAVLTYQKPDE

>gi568815590f:39484623_39710730|GENSCAN_predicted_CDS_3|1143_bp
atgggggtggatccctcatggcttggtgctgtccttgcaatgatgcattgccattaccaa
ggatatgctgccgaatttccaaattcatttgtgacactcagtatatgttctggtctcagg
ggatttctccagtttgaaaatatcagttatggaattgaaccagtagaatcttcagcaaga
tttgagcatataatttatcaaatgaaaaataatgatccaaatgtatccattttagcagta
aattacagtcatatttggcagaaagaccagccctacaaagttcctttaaactcacagcct
cacccctgccagtacatgtacacatgcagaccccatagagctaccaccgctagaacacac
ctggatgcgtggactccaccatgtctccctgttgctgctgccatgcatgcatgcatcgaa
cccaacatgccgctaccaccacagtatgattatatgggatctgaaatgatggctgtaaca
caaaaaattgtccaggttattgggcttgtcaacacttatccagatgcaataggtttggag
ggattttcggttattatagctcaactgcttggccttaatgtaggattaacatatgatgac
atcactcagtgtttctgtctgagagctacatgcatcatgaatcatgaagcagtgagtgcc
agtggtagaaagatttttagcaactgcagcatgcacgactatagatattttgtttcaaaa
tttgagactaaatgccttcagaagctttcaaatttgcaaccattacatcaaaatcaacca
gtgtgtggtaatgggattttggaatccaatgaagaatgtgactgtggtaataaaaatttg
tcaatagcaggcactccatgtagaaagagtattgatccagagtgtgattttacagagtac
tgcaatggaacctctagtaattgtgttcctgacacttatgcattgaatggccgtttgtgc
aagttgggaactgcctattgctataacggacaatgtcaaactactgataaccagtgtgcc
aagatatttggaaaaggtcagagtgggaatgccactacactcaccggtagcaatggatat
gataagatctggaaaaatcaagaccagatagcagtgcttacctaccagaagccagatgaa
taa

>gi568815590f:39484623_39710730|GENSCAN_predicted_peptide_4|349_aa
MNRYFSKEDIHAAKKHGKKAQHHRALRKCKSKPNAIILKSGSRRRRLGHKGRIPMNEISA
LIKEVQWSLFTLSVMRGHGSELPGLRSRSMSKEEPHAPTGIWHLLLMMPQVSIPCIIANR
SSTISGMTPLGPGHQHQRPKVDKTTKVGRNQSRKAENSKNQSASSPPKDHSSSPATEQSW
TENDFDELTEVSFRRLVITNFSELKEDVKTHHKEAKNLEKRLDEWLTRINSVERTLNDLM
ELKTMARELHHSAIKLELKIKKLSQNRTTTWKLNNLLLNDYWVNNKMKAEIKMFFETNEN
KDKTYQNFWDTFKAVCRGKFIALNAHKRKQERSKIDTLTSQLKELEKQE

>gi568815590f:39484623_39710730|GENSCAN_predicted_CDS_4|1050_bp
atgaacagatacttttcaaaagaagacatacatgcagccaagaaacatggaaaaaaagct
caacatcatcgagcattaagaaaatgcaaatcaaaaccaaatgcaatcatattaaaaagt
ggatcccgtagaaggcgattaggtcacaagggtagaatccccatgaatgagattagcgcc
ttaataaaagaggttcaatggagcttgttcaccctttctgtcatgcgaggacacggatca
gagttaccaggcctgaggagcagatctatgtcaaaagaggagcctcatgcacccacagga
atttggcacttactgctcatgatgcctcaagtctctattccctgcattatagcaaaccgc
tcttcaaccatatcgggtatgactccactgggcccaggtcaccaacatcaaagaccaaag
gtagacaaaaccacaaaggtgggaagaaaccagagcagaaaagctgaaaattctaaaaat
cagagtgcctcttctcctccaaaggatcacagctcctcgccagcaacggaacaaagctgg
acggagaatgactttgatgagttgacagaagtaagcttcagaaggttggtaataacaaac
ttctccgagctaaaggaggatgttaaaacccatcacaaggaagctaaaaaccttgaaaaa
agattagatgaatggctaactagaataaacagtgtagagaggaccttaaatgacctgatg
gagctgaaaaccatggcacgagaacttcaccacagtgcaatcaaactagaactcaagatt
aagaaactctctcaaaaccgcacaactacatggaaactgaacaatttgctcctgaatgac
tactgggtaaataacaaaatgaaggcagaaataaagatgttctttgaaaccaatgagaac
aaagataaaacgtaccagaatttctgggatacatttaaagcagtgtgtagagggaaattt
atagcactaaatgcccacaagagaaagcaggaaagatctaaaatcgacaccttaacatca
caattaaaagaactagagaagcaagagtaa

>gi568815590f:39484623_39710730|GENSCAN_predicted_peptide_5|75_aa
MNIDAKILNKILVNRIQKHIKKDYPPQSDSLHLQDARYVIILVIVNASLDIDLQIVNSSL
VPQGVVLMMEIFRNL

>gi568815590f:39484623_39710730|GENSCAN_predicted_CDS_5|225_bp
atgaacatcgatgcaaaaatcctcaacaaaatactggtcaaccgaattcagaagcacatc
aaaaaagattatccaccacaatcagatagtcttcatctccaggatgcaagatatgtaata
attttggtaattgtcaatgcttccctggacatagacctccagattgtaaattccagtttg
gttccccagggggtagtattgatgatggaaattttcagaaatctg