GENSCAN 1.0	Date run:  2-Nov-116	Time: 20:40:49

Sequence gi568815589r:34270802_34472841 : 202040 bp : 45.14% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 Intr -   1129   1008  122  1  2   84   99   142 0.566  14.19
 1.03 Intr -  15903  15816   88  2  1   83   76    62 0.566   4.47
 1.02 Intr -  19588  19373  216  0  0   70   79   132 0.264   8.12
 1.01 Init -  40545  39923  623  0  2   83   90   307 0.280  25.22
 1.00 Prom -  40993  40954   40                              -6.66

 2.00 Prom +  42873  42912   40                              -2.56
 2.01 Init +  43565  43575   11  1  2   68   77    15 0.802  -2.19
 2.02 Intr +  47626  48003  378  1  0   97   17   623 0.865  50.18
 2.03 Intr +  48049  48453  405  1  0   56   51   665 0.851  53.06
 2.04 Term +  48566  48854  289  2  1    0   49   456 0.801  27.75
 2.05 PlyA +  49516  49521    6                               1.05

 3.00 Prom +  53231  53270   40                              -6.46
 3.01 Init +  68239  68365  127  0  1   91   75   104 0.992   9.72
 3.02 Term +  72323  72639  317  0  2  112   49   382 0.999  31.80
 3.03 PlyA +  72878  72883    6                               1.05

 4.00 Prom +  82675  82714   40                              -3.26
 4.01 Init +  96820  96870   51  0  0   77   90    39 0.525   4.35
 4.02 Term +  97239  97322   84  2  0  103   42    65 0.517   1.05
 4.03 PlyA +  98555  98560    6                              -0.45

 5.20 PlyA -  98915  98910    6                               1.05
 5.19 Term - 102149  99998 2152  1  1   65   46  4217 0.269 400.57
 5.18 Intr - 105442 105256  187  2  1   53   71   127 0.402   6.25
 5.17 Intr - 107807 107749   59  1  2   78   93   -24 0.145  -4.37
 5.16 Intr - 108380 108279  102  1  0   74   40    94 0.333   2.49
 5.15 Intr - 108931 108845   87  0  0  109   97   121 0.999  14.19
 5.14 Intr - 109673 109536  138  1  0   49   80    99 0.865   4.78
 5.13 Intr - 110283 110096  188  0  2   20   63   189 0.120   8.09
 5.12 Intr - 112065 111953  113  1  2   56   65   127 0.195   7.30
 5.11 Intr - 114980 114836  145  2  1  124  116   147 0.967  20.96
 5.10 Intr - 126773 126698   76  1  1   57  131    52 0.038   5.92
 5.09 Intr - 130321 130212  110  1  2  111    9   299 0.060  23.38
 5.08 Intr - 130919 130865   55  1  1   66   83    55 0.904   1.78
 5.07 Intr - 131666 131586   81  1  0   64   89   106 0.865   7.05
 5.06 Intr - 132006 131904  103  1  1  105   75   194 0.999  19.03
 5.05 Intr - 134905 134831   75  2  0   75   66    66 0.826   2.59
 5.04 Intr - 135163 135064  100  1  1  134   92    76 0.882  12.28
 5.03 Intr - 138313 138224   90  1  0   54   84    40 0.372   0.39
 5.02 Intr - 143821 143775   47  2  2  101   95     8 0.361   0.93
 5.01 Init - 151454 151436   19  2  1  109   68    27 0.385   2.43
 5.00 Prom - 155348 155309   40                              -5.76

 6.04 PlyA - 156713 156708    6                               1.05
 6.03 Term - 158482 158390   93  1  0  109   39   106 0.498   5.63
 6.02 Intr - 167049 166872  178  2  1  -15   69   111 0.200  -1.18
 6.01 Init - 167535 167408  128  0  2   77   27   173 0.374   7.73
 6.00 Prom - 171229 171190   40                              -2.26

 7.03 PlyA - 171517 171512    6                               1.05
 7.02 Term - 174466 174383   84  1  0   63   48    82 0.386  -0.65
 7.01 Init - 187462 187403   60  1  0  103   81   115 0.687  13.58

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 130321 130163  159  1  0  111   44   332 0.874  29.04


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815589r:34270802_34472841|GENSCAN_predicted_peptide_1|350_aa
MASWLYECLCEAELAQYYSHFTALGLQKIDELAKITMKDYSKLGVHDMNDRKRLFQLIKI
IKIMQEEDKAVSIPERHLQTSSLRIKSQELRSGPRRQLNFDSPADNKDRNASNDGFEMCS
LSDFSANEQKSTYLKVLEHMLPDDSQYHTKTGILNATAGDSYVQTEISTSLFSPNYLSAI
LGDCDIPIIQRISHVSGYNYGIPHSCIRGNATCFAYGQTGAGKTYTMIGTHENPGLYALA
AKDIFRQLEVSQPRKHLFVWISFYEIYCGQLYDLLNRRKRLFAREDSKHMVQIVGLQELQ
VDSVELLLEVILKGSKERSTGATGVNADSSRSHAVIQIQIKDSAKRTFGS

>gi568815589r:34270802_34472841|GENSCAN_predicted_CDS_1|1050_bp
atggcatcctggttatatgaatgtctttgtgaagctgaacttgcacagtattattctcat
ttcactgcccttggccttcagaaaatagatgaattagccaagattacaatgaaggactac
tccaaattaggagtccatgacatgaacgaccgcaaacgtctcttccaacttatcaaaatt
attaagattatgcaagaagaagataaagcagtcagtatcccagagcgtcatcttcagaca
agcagcctgcgcatcaaatctcaggaattaagatctggccctcgcagacagctgaatttt
gattctcctgctgacaataaagacagaaatgccagcaatgatgggtttgaaatgtgcagt
ttatcagatttctctgcaaatgaacagaagtccacttacctaaaagtgctagaacacatg
ctaccagatgattcccagtaccatacaaaaacaggaattctgaatgccacagctggtgat
tcctatgtgcaaacagaaatcagcacttcactcttttcaccaaattacctttctgcaata
ctgggggattgtgatattcccattattcaaagaatctctcatgtttcagggtataactat
ggaatccctcattcttgtatcagaggcaatgccacttgctttgcttatggacagacaggt
gctggaaagacctacaccatgataggaactcatgagaacccaggattgtatgctctagct
gccaaagatatcttcaggcaactagaagtgtcccagccaagaaagcacctctttgtgtgg
atcagcttctatgaaatttactgtggacagctttatgacctcctaaatagaagaaaaagg
ctctttgcaagagaagatagcaagcacatggtgcagatagtgggactgcaagagcttcag
gtggacagtgtggagctcctcttagaggtgatcttaaagggcagcaaggagcgcagcact
ggggccactggagttaatgcagactcctcccgctcccatgccgtcatccaaattcagatc
aaagattcagccaagaggacatttggcagn

>gi568815589r:34270802_34472841|GENSCAN_predicted_peptide_2|360_aa
MLASAFCLLAVALATEVKKPAATAAPGTAEKLSPKAATLAEHSAGLAFSLYQAMAKDQAV
ENILVSPVVVASSLGLVSLGGKATTASEAKAVLSAKQLSDEEVHAGVGEPLRSLSNSTAR
NVTWKLCSRLSKQHYNCEHSKINFHDKRSALQSIHEWAVQTTDGKLPKVTKDMECMDGAL
LVNTMFFKPHWNEKFHHKMVENRGFMVTRFYTVGVMVMHQTGLYNYYDNEKEKLQIVEMP
LAHKLSSLIILMPHHVEPLEALKSWLGLTEAIDKNKANLSRMPHKKDLYLTSVFHATAFE
LDTDGNSFDQDIYGSKELRSPKLFYSDHPFIFLVWDTQSGSLLFTGHLVRPKVDKMQDEF

>gi568815589r:34270802_34472841|GENSCAN_predicted_CDS_2|1083_bp
atgttggccagcgccttctgcctcctggcggtggccttggcgaccgaggtgaagaaacct
gcagccacagcagctcctggcaccgcagagaagctgagccccaaggcagccacgctggcc
gaacacagcgccggcctggccttcagcctgtaccaggccatggccaaggaccaggcggtg
gagaacatcctggtgtcgcccgtggtggtggcctcgtcgttggggctcgtgtcgctgggc
ggcaaggcgaccacggcgtcggaggccaaggcagtgctgagtgccaagcagctgagcgac
gaggaggtgcacgccggcgtgggcgagccgctgcgttcactcagcaactccaccgcgcgc
aacgtgacctggaagctgtgcagtcgcctcagcaagcagcactacaactgcgagcactcc
aagatcaatttccatgacaagcgcagtgcgctgcagtccatccacgagtgggccgtgcag
accaccgacggcaagctgcccaaggtcaccaaggacatggagtgcatggatggcgccctg
cttgtcaacaccatgttcttcaagccacactggaatgagaaattccaccacaagatggtg
gaaaaccgtggcttcatggtgactcggttctataccgtgggtgtcatggtgatgcaccag
acaggcctctacaactactatgacaatgagaaggaaaagctgcaaatcgtggagatgccc
ctggcccacaagctctccagcctcatcatcctcatgccccaccacgtggagcccctcgag
gccttaaaaagctggcttggcctgactgaggccattgacaagaacaaggcaaacttgtca
cgcatgccacacaagaaggacctgtacctgaccagcgtgttccacgccaccgcctttgag
ttggacacagacggcaactcctttgaccaggacatctatgggagcaaggagctgcgcagc
cccaagctgttctactccgaccaccccttcatcttcctggtgtgggacacccagagcggc
tccctgctgttcactgggcacctggtccggcctaaggttgacaagatgcaagacgagttt
tag

>gi568815589r:34270802_34472841|GENSCAN_predicted_peptide_3|147_aa
MALRACGLIIFRRCLIPKVDNNAIEFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQ
EEAGIEAGQLTIIEGFKRELNYVARNKPKTVIYWLAEVKDYDVEIRLSHEHQAYRWLGLE
EACQLAQFKEMKAALQEGHQFLCSIEA

>gi568815589r:34270802_34472841|GENSCAN_predicted_CDS_3|444_bp
atggccttgagagcatgtggcttgatcatcttccgaagatgcctcattcccaaagtggac
aacaatgcaattgagtttttactgctgcaggcatcagatggcattcatcactggactcct
cccaaaggccatgtggaaccaggagaggatgacttggaaacagccctgagggagacccaa
gaggaagcaggcatagaagcaggccagctgaccattattgaggggttcaaaagggaactc
aattatgtggccaggaacaagcctaaaacagtcatttactggctggcggaggtgaaggac
tatgacgtggagatccgcctctcccatgagcaccaagcctaccgctggctggggctggag
gaggcctgccagttggctcagttcaaggagatgaaggcagcgctccaagaaggacaccag
tttctttgctccatagaggcctga

>gi568815589r:34270802_34472841|GENSCAN_predicted_peptide_4|44_aa
MVSFDSMSHIQVTLMQEAQHYVEDAKTWGLHPLKPRPELYLGPF

>gi568815589r:34270802_34472841|GENSCAN_predicted_CDS_4|135_bp
atggtctcctttgactccatgtctcacatccaggtcacactgatgcaggaggctcaacac
tacgtggaagatgccaagacttggggcttgcaccctctgaagccaaggcctgagctgtat
cttggccccttttag

>gi568815589r:34270802_34472841|GENSCAN_predicted_peptide_5|1308_aa
MAVPLADLPQRPYPYKKSLSFPALLNCGPKELAVSSRIKYHQELPSRPQGPHDPAAASIS
DGDCDAREGESVAMNYKPSPLQVKLGKEGSYSSLQEPETLRGISEAKNVPEKQRELARKG
SLKNGSMGSPVNQQPKKNNVMARTRLVVPNKGYSSLDQSPDEKPLVALDTDSDDDFDMSR
YSSSGYSSAEQINQDLNIQLLKDGYRLDEIPDDEDLDLIPPKSVNPTAPTSIKEVYKDPP
LCAWEANKFLTPGLTHTMERHVDPEALQKMAKCAVQDYTYRGSISGHPYLPEKYWLSQEE
DKCSPNYLGSDWYNTWRMEPYNSSCCNKYTTYLPRLPKQLPRITPRCGCVDPLPGRLPFH
GYESACSGRHYCLRGMDYYASGAPCTDRRLRPWCREQPTVRKMSSLAGPPSPSVVGAVIP
GGYVSREMVTTLPEWLWPPRIPHHLRRCVPPYEHRPGMQCAVTTPPPSYYPYPNLRWDTS
HFKKSGGPQRNNYVIHPEFVSETYPDYRCWSPHHSLPKASLCSDTLAAQAPVPDAIKIAL
FAALVVFVVRVEQAAAPALGKTGLTMPCPSDGSWSHQLSPRAPFCYCIQAASPLMLQNPQ
EKSQAYPRRRRPGCYAYRQNPEAIAAAAMYTFLPDNFSPAKPKPSKDLKPLLGSAVLGLL
LVLAAVVAWCYYSVSLRKAERLRAELLDLKAGGFSIRNQKGEQVFRLAFRSGALDLDSCS
RDGALLGCSLTADGLPLHFFIQTVRPKDTVMCYRVRWEEAAPGRAVEHAMFLGDAAAHWY
GGAEMRTQHWPIRLDGQQEPQPFVTSDVYSSDAAFGGILERYWLSSRAAAIKVNDSVPFH
LGWNSTERSLRLQARYHDTPYKPPAGRAAAPELSYRVCVGSDVTSIHKYMVRRYFNKPSR
VPAPEAFRDPIWSTWALYGRAVDQDKVLRFAQQIRLHHFNSSHLEIDDMYTPAYGDFDFD
EVKFPNASDMFRRLRDAGFRVTLWVHPFVNYNSSRFGEGVERELFVREPTGRLPALVRWW
NGIGAVLDFTHPKARDWFQGHLRRLRSRYSVASFKFDAGEVSYLPRDFSTYRPLPDPSVW
SRRYTEMALPFFSLAEVRVGYQSQNISCFFRLVDRDSVWGYDLGLRSLIPAVLTVSMLGY
PFILPDMVGGNAVPQRTAGGDVPERELYIRWLEVAAFMPAMQFSIPPWRYDAEVVAIAQK
FAALRASLVAPLLLELAGEVTDTGDPIVRPLWWIAPGDETAHRIDSQFLIGDTLLVAPVL
EPGKQERDVYLPAGKWRSYKGELFDKTPVLLTDYPVDLDEIAYFTWAS

>gi568815589r:34270802_34472841|GENSCAN_predicted_CDS_5|3927_bp
atggccgtacctctggcagatctcccacaaagaccttatccctataagaagtctttgtct
ttccctgccctcctgaattgtggtccaaaggagctggcagtttcatccaggatcaaatac
catcaggaactgcccagtaggcctcaaggaccacatgacccagccgccgcctccatctct
gacggagactgtgacgcccgggagggtgagtcagtagccatgaattacaaaccatccccg
ctccaagtgaagctgggcaaagagggcagttacagttctctgcaggagcctgaaactcta
agaggcatctctgaagccaagaacgttccagagaagcagcgggagctggcccggaagggc
tccctgaagaatggcagcatgggtagccctgtcaaccagcaacccaagaagaacaatgtc
atggcccgaacaaggctggtcgtccccaataaaggctactcctcacttgaccagagccct
gatgagaagccactggtagcccttgacacggacagcgatgatgactttgacatgtctaga
tactcctcctccggctactcctctgctgagcagatcaaccaagatttgaacatccagctg
ctgaaggacggctaccggttagatgagatccccgacgacgaggacctagacctcatcccc
cccaagtccgtgaaccccacggctcccacctccatcaaggaggtctataaggacccaccc
ctgtgtgcctgggaagccaacaagtttctgactccgggtctgactcataccatggagcga
catgtggatcccgaagccctgcagaagatggccaaatgtgctgtacaggactacacttat
agggggtccatatcaggccacccctacttgcctgagaagtactggctttctcaagaggaa
gacaaatgcagcccaaactacctgggcagtgactggtacaacacatggaggatggaacct
tacaacagcagctgctgcaacaagtataccacctaccttcctcggctgcctaagcagctg
ccgcggatcacgccccgatgcgggtgcgtggacccgctgcccggccgcctgcccttccat
ggttacgaaagtgcttgctcgggccgccactactgtctgcgcgggatggactactacgcc
agcggggcgccctgcaccgaccgccgcctgcggccttggtgccgggagcaaccgactgta
agaaaaatgtcctctcttgctggtcccccgtcaccgtcggtagtgggtgcggtcattcct
gggggctacgtgagccgggaaatggtgaccactttaccagaatggctctggcctcctcgg
atcccgcaccacctgcggagatgtgtacctccctacgagcaccggcccggaatgcagtgt
gctgttacaactcccccgccgtcatactacccatatccgaaccttagatgggacacaagt
cacttcaagaagtctggtggtccccagagaaacaactatgttatccatcctgagtttgtg
tctgagacctatcccgactatcgttgctggagtccccatcacagcctcccaaaagcctct
ctgtgctcagacacccttgctgcacaagccccggtaccagatgccattaaaattgccctc
tttgctgccctcgtggtcttcgtggtccgcgtggagcaagcagcagcaccagcccttgga
aagacaggcctcaccatgccatgtccatctgatggaagctggtcccaccagctcagcccc
agggctcctttctgctactgcattcaggcagccagcccactaatgctccagaaccctcag
gagaagagccaggcctacccccgccgccgccggcctggctgctacgcataccgtcagaac
cccgaggccatcgcagccgcagctatgtacaccttcctgcccgacaacttctcacctgcc
aagcccaagccttccaaagacctgaagccgctgctgggctccgcggttctggggctgctg
cttgtgctggccgcggtggtggcctggtgctactacagcgtctccctacgcaaggcggag
cgacttcgcgcggagctgctggacctgaaagctggcggcttctccatccgcaatcagaag
ggagagcaggtcttccgcctggccttccgctccggcgcgctggaccttgactcctgcagc
cgcgatggcgccctgctgggctgctcgctcacggccgacgggctgccgctgcacttcttc
atccagactgtgcggcccaaggacacggtcatgtgctaccgcgtgcgctgggaggaggca
gcgccgggccgggccgtggagcacgccatgttcttgggcgacgcggcggcccactggtat
ggtggcgccgagatgaggacgcaacactggcccatccgcctggatggccagcaggagccc
cagccgttcgtcaccagcgatgtctactcctccgacgccgcgtttgggggcatcctcgag
cgctactggctatcttcgcgcgcggccgccatcaaagtcaatgactcagtgcccttccac
ctgggctggaacagcacggagcgctcgctgcggcttcaggcgcgctaccacgacacgccc
tacaagccacccgccggccgcgccgcagcgccagagctgagctaccgagtgtgcgtgggc
tcagacgtcacctccatccacaagtacatggtgcgtcgctacttcaacaagccgtcaagg
gtgccagcacccgaggccttccgagaccccatttggtccacatgggcgctgtacgggcgc
gccgtggaccaggacaaggtgctgcgttttgcccaacagatccgcctgcaccacttcaac
agcagccacctggaaatcgacgacatgtacacacctgcttatggcgacttcgacttcgat
gaggtcaaattccccaacgccagcgacatgttccgccgcctgcgcgacgccggcttccgc
gtcacgctctgggtgcacccttttgtcaactacaactcgtcgcgcttcggcgagggcgtg
gagcgcgagctgttcgtgcgcgaacccacgggccggttacctgcgctggtgcgctggtgg
aacggcatcggcgcggtgctagacttcacgcacccaaaggcccgcgactggttccaggga
cacctgcggcggctgcgctctcgctactccgtggcttccttcaagttcgacgcgggcgag
gtcagctacctgccgcgggacttcagcacctaccggccgctgccggaccccagcgtctgg
agccggcgctacactgagatggcgctgcccttcttctcgctggcggaggtgcgcgtaggc
taccagtcacagaacatctcctgcttcttccgcctggtggatcgcgactctgtgtggggc
tacgacctggggttgcgctcactcatccccgcggtgctcaccgtcagcatgctgggctac
ccattcatcctacccgatatggtgggcggcaacgccgtgccccagcggacagccggcggc
gatgtgcccgagcgcgagctctacattcgctggctggaagtggccgcctttatgccggcc
atgcagttctctatcccgccctggcgctacgacgcggaagtggtggccatcgcgcagaag
ttcgccgccctgcgggcctcgcttgtggcaccgctgttgcttgagctggcgggcgaggtc
accgacacgggtgaccctatcgtgcgccccctttggtggattgcgcccggcgacgagaca
gctcaccgtatcgactcgcagttccttattggggacacgctgcttgtggccccggtgctg
gagccaggcaagcaggagcgcgacgtctatttgcccgccggcaagtggcgcagctacaag
ggtgagcttttcgacaagacgccggtgctgctcaccgattacccggtcgacctggatgag
atcgcctactttacctgggcgtcctga

>gi568815589r:34270802_34472841|GENSCAN_predicted_peptide_6|132_aa
MRPHSSALVWSMGLGAVEQGVALIGEAQASLGRLMAAQEPMEGGGLKGSSNATKVGAQAE
EALRATEGCEDCQHAVTSQKHLLLICHQTHSVSFNLLNSAKKASGSLIEGTVKPKGMHYT
SKNLLVKEIDAK

>gi568815589r:34270802_34472841|GENSCAN_predicted_CDS_6|399_bp
atgcgcccgcactcctcagcccttgtgtggtcgatgggactgggcgccgtggagcagggg
gtggcgctcattggggaggcacaggcctcactggggaggctcatggccgcacaggagccc
atggagggcggtgggctgaagggctcctcaaatgccaccaaagtaggagcccaggcagag
gaggcgctgagagcgaccgagggctgtgaggactgccagcacgctgtcacctctcagaag
cacttactacttatctgccaccagacacacagtgtttcatttaatcttctcaactctgca
aagaaggcttctgggtcccttattgaaggaactgtcaagcccaaaggcatgcattatacc
tcaaagaacctcctggtcaaagaaattgatgctaaataa

>gi568815589r:34270802_34472841|GENSCAN_predicted_peptide_7|47_aa
MMEEIDRFQVPTAHSEMQPLNLQTGEEDTCSYETELQKNTAGSFKDE

>gi568815589r:34270802_34472841|GENSCAN_predicted_CDS_7|144_bp
atgatggaggagatcgaccggttccaggtgcccaccgcgcactcggagatgcagccgctg
aacttacagactggtgaagaagatacttgctcttatgaaacagaactacagaagaataca
gctggctcctttaaagatgagtaa