GENSCAN 1.0	Date run:  7-Nov-116	Time: 21:22:16

Sequence gi568815589r:30731884_30932225 : 200342 bp : 34.39% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +  12061  12266  206  2  2    7   54   214 0.727   6.45
 1.02 PlyA +  13215  13220    6                               1.05

 2.00 Prom +  22600  22639   40                              -4.45
 2.01 Init +  25945  26038   94  0  1   39   84    74 0.828   1.03
 2.02 Intr +  26107  26328  222  2  0   27   13   203 0.444   3.88
 2.03 Intr +  26571  26885  315  1  0   85  103   101 0.708   6.41
 2.04 Intr +  27439  27558  120  2  0   50   52   110 0.178   3.15
 2.05 Intr +  41853  42214  362  1  2   73   22   413 0.323  27.21
 2.06 Intr +  42305  42532  228  1  0  -11   34   335 0.442  15.34
 2.07 Term +  49188  49403  216  2  0   24   38   148 0.073  -0.44
 2.08 PlyA +  49579  49584    6                               1.05

 3.03 PlyA -  49974  49969    6                               1.05
 3.02 Term -  55996  55002  995  2  2   47   37   392 0.113  21.24
 3.01 Init -  58517  58397  121  2  1   74   -4   154 0.497   5.20
 3.00 Prom -  61464  61425   40                              -4.85

 4.05 PlyA -  63016  63011    6                               1.05
 4.04 Term -  67950  67745  206  1  2  -20   50   252 0.689   7.15
 4.03 Intr -  68410  68176  235  1  1   77  -29   477 0.758  31.24
 4.02 Intr -  68805  68504  302  1  2   64   71   406 0.245  32.03
 4.01 Init -  80899  80887   13  1  1   78   69    17 0.003  -0.87
 4.00 Prom -  87165  87126   40                              -4.85

 5.00 Prom +  87898  87937   40                              -7.15
 5.01 Init +  88497  88634  138  2  0   70   -5   143 0.400   3.39
 5.02 Term +  89250  89642  393  2  0   62   41   218 0.669   8.55
 5.03 PlyA +  92248  92253    6                               1.05

 6.03 PlyA -  93380  93375    6                               1.05
 6.02 Term - 100366  99995  372  1  0   74   49   463 0.086  34.71
 6.01 Init - 114840 114811   30  0  0   85  107     6 0.884   2.01
 6.00 Prom - 115055 115016   40                              -5.45

 7.00 Prom + 120588 120627   40                              -7.65
 7.01 Init + 122421 122606  186  2  0   56  115   119 0.917  10.50
 7.02 Intr + 123497 123676  180  1  0   55   65   100 0.786   3.54
 7.03 Term + 126107 126334  228  1  0   86   48   124 0.867   3.85
 7.04 PlyA + 126426 126431    6                               1.05

 8.03 PlyA - 127466 127461    6                               1.05
 8.02 Term - 151676 151540  137  0  2   47   42   179 0.914   6.40
 8.01 Init - 168583 168568   16  1  1   81  121    10 0.033   4.04
 8.00 Prom - 176050 176011   40                              -4.75

 9.00 Prom + 182721 182760   40                              -4.55
 9.01 Sngl + 193842 194090  249  2  0   60   50   192 0.847   7.43
 9.02 PlyA + 194410 194415    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  55928  55002  927  2  0   70   37   355 0.829  24.75
S.002 Intr +  80299  80356   58  2  1   94  101    51 0.818   4.02
S.003 Sngl - 100342  99995  348  1  0   66   49   440 0.834  33.69
S.004 Term - 112513 112394  120  1  0  119   43    63 0.841   2.39


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815589r:30731884_30932225|GENSCAN_predicted_peptide_1|68_aa
XSSVVDRKGLSQGAFKSFETLELVAAAPGRQLSDFGKHEFRPPPLVAVVVAAITVIVEAV
GGTRFQSM

>gi568815589r:30731884_30932225|GENSCAN_predicted_CDS_1|207_bp
ntgtcatcagtggtggacaggaaaggcctatctcagggtgcattcaagtcctttgaaacc
ctggagttggttgcagcagcaccaggaaggcaactctcagactttgggaagcatgagttt
cggcctccaccattggtggcagtggtagtggcagcaataacagtcatagtggaagcagtt
ggaggaacccgttttcagagcatgtga

>gi568815589r:30731884_30932225|GENSCAN_predicted_peptide_2|518_aa
MLLVLAGLVLPTPPGRLCSTHATGPYPTPAKARHASSCGVGGKLQAQAHVPAPWEALLDQ
VYRFQLPLRAPVSQQGEYGGNQKFGDSRNGRAPKRVSQPWLLEPIGRSSGRVCSFQWRRD
PQWVAPFRRQVVPTSVQLSEERRPGRDSSFVRAGCPNESRRPKEGSSFLQLLILMFVQVW
RSPGVFISSEGRQLHEDWSMGSRGQAWKKHRPHRLEVERSPGCTSSAAAIVFAAASPDES
SLPSLGHQTPERGASRPRTRGWRANLGCTWRRRDPKSETGAITIQDLRAQIFTNTMDNAH
IVLQVDNAGLAADDFRVKYETGTVMRRSVEREIHGLHKIIDDTNVTWLQLKTQIEAFKEE
LLFMKKNHEEETSGPNNEELAQKNREDLEKYWSQQIEESTTVVTMQSAEVGAAEVTLMEL
THTVQSLEIDLDLMRNNKANWENSPREVESQCEEGWNLQKELIFLLYCRNGHRLAPWSDY
VMTPVPCSSSLLDINDQIKRSISVELRDGVDTDLKKCR

>gi568815589r:30731884_30932225|GENSCAN_predicted_CDS_2|1557_bp
atgttgctggtgcttgctgggctcgttctgcccaccccacctggcaggctgtgctcaact
catgctaccggcccatatcccacacctgccaaggcaaggcatgccagcagctgtggtgtc
ggtgggaagctccaggcccaagcacacgtgccggctccatgggaggctttgctggaccag
gtataccgctttcagcttccactgagggcacctgtgtctcaacaaggggaatatggtggc
aaccagaagtttggagactccaggaatggcagagccccaaagagggtgtcacagccctgg
ctcctggagcccataggcaggtcgtccggaagagtgtgcagctttcagtggagaagagac
ccacagtgggtagctcctttccgcaggcaggttgtcccgacaagtgtccagctctcagag
gagaggagacctggcagggatagctcctttgtgcgggcaggttgtcccaatgagtcaagg
agacccaaagagggtagttcctttttgcagctgctaatcctgatgtttgtccaagtctgg
cggagtccaggggtttttataagctcagaagggaggcagttgcatgaagattggtccatg
ggcagccgtggacaggcctggaaaaagcaccgcccccaccggctcgaagtagagcgcagc
cccggctgcacttcctctgctgcagccatcgtctttgcagcagccagtccagatgagtcg
tcactgccatcacttggacatcagactccagagcgaggagcctcgagaccaagaaccaga
gggtggagagcaaacttggggtgcacctggagaagaagagaccctaagtcagagactggg
gccattaccattcaggacctgagggctcagatcttcacaaatactatggacaatgcccac
attgttctgcaggttgacaatgctggtcttgctgctgatgactttagagtcaagtatgag
acagggacagtcatgcgccggtctgtggagagagaaatccatgggctccacaagatcatt
gatgacaccaatgtcacttggctgcagctgaagacacagatcgaggctttcaaggaggag
ctgctcttcatgaagaagaaccatgaagaggaaacatccgggcccaataacgaagagctg
gctcagaagaaccgagaggatctagaaaagtactggtctcagcagattgaggagagcacc
acagtggtcaccatgcagtccgctgaggttggagctgccgaagtgacgctcatggaactg
acacatacagtccagtccttggagatcgacctggacttgatgagaaataacaaggccaat
tgggagaacagcccgagggaggtagaaagccaatgcgaggaggggtggaacttacagaag
gaacttatattccttctgtactgcaggaatgggcacagactggctccctggtctgactac
gtaatgacaccagttccatgttcatcgtcacttttagatattaatgatcagataaaacgc
tcaatttcagtggaattaagagatggagtggatactgatctcaagaagtgtcggtaa

>gi568815589r:30731884_30932225|GENSCAN_predicted_peptide_3|371_aa
MRQQHSWITKIRGSADTAADTQAKRVWSGPLANSNRPAAEEIQTTIREYYKHLYSNKLEN
LEEMDKFLDTYTLPRLNQEEVVSLNRPITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYK
EELVPFLLKLFQSIEKEGILPNSFYEASIILISKPGTDTTKKENFRPISLMNIDAKILNK
ILANRIQQHIKKLIHHDQVGFIHGMQGWFNICKSINVIQHINRTKDKNHMIISIDAEKAF
DKIQQRFMLKILNKLGIDGMYLKIIRALYDKPTANIILNGQKLEVLPLKTGRRQGCSLSP
LLFNIVLEVLARAIRQEKEIKGIQLGKEEVKLSLFADDMIVYLENPIVSAQNLLKLISNF
NKVSGYKINVQ

>gi568815589r:30731884_30932225|GENSCAN_predicted_CDS_3|1116_bp
atgagacagcagcattcgtggatcacgaaaatccgtggttctgcagacacggctgctgat
acccaagcaaaaagggtctggagtggacctctagcaaactccaacagacctgcagctgag
gaaatacaaactaccatcagagaatactacaaacacctctactcaaataaactagaaaat
ctagaagaaatggataaattcctcgacacatacactctcccaagactaaaccaggaagaa
gttgtatctctgaatagaccaataacaggctctgaaattgtggcaataatcaatagctta
ccaaccaaaaagagtccaggaccagatggattcacagccgaattctaccagaggtacaag
gaggaactggtaccattccttctgaaactattccaatcaatagaaaaagaaggaatcctc
cctaactcattttatgaggccagcatcatcctgatatcaaagccaggcacagacacaacc
aaaaaagagaattttagaccaatatccttgatgaacattgatgcaaaaatcctcaataaa
atactggcaaaccgaatccagcagcacatcaaaaagcttatccaccatgatcaagtgggc
ttcatccatgggatgcaaggctggttcaatatatgcaaatcaataaatgtaatccagcat
ataaacagaaccaaagacaaaaaccacatgattatctcaatagatgcagaaaaggccttt
gacaaaattcaacaacgcttcatgctaaaaattctcaataaattaggtattgatgggatg
tatctcaaaataataagagctctctatgacaaacccacagccaatatcatactgaatggg
caaaaactggaagtactccctttgaaaaccggcagaagacagggatgctctctctcacca
ctcctattcaacatagtgttggaagttctggccagggcaatcaggcaggagaaggaaata
aagggtattcaattaggaaaagaggaagtcaaattgtccctgtttgcagatgacatgatt
gtatatctagaaaaccccattgtctcagcccaaaatctccttaagctgataagcaacttc
aacaaagtctcaggatacaaaatcaatgtacaataa

>gi568815589r:30731884_30932225|GENSCAN_predicted_peptide_4|251_aa
MTEEGAQLRRPAASSVASVYAGKGSASWISVSRSTSFLGGMGSGDLAAGMARGLAGMGGI
QNKKETMQDLNDGLASYLDRVRSLETNKRKLESKIQEHLEKKGPQMDNAGLAADDFRVKY
ETELVMRQSVENDIHGLCKVMDGTNVTRMQLETQFEALKEELLLMKKNHEEQVKGRQAQI
AALDRPGLDEKSEGQLGEQPEGGGSPLRPADGTAQRDPVAPGVRAGTDLGRGVAPGAGVR
VPAEHQGQAGG

>gi568815589r:30731884_30932225|GENSCAN_predicted_CDS_4|756_bp
atgactgaagaaggtgcccagctacggcgcccagctgccagcagcgtggccagcgtctat
gcaggcaagggctctgcttcctggatctccgtgtcccgctccaccagcttcctgggcggc
atggggtccggggacctggccgcggggatggccaggggtctggcaggaatgggaggcatc
cagaacaagaaggagaccatgcaagacttgaacgacggcctggcctcctacctggacaga
gtaaggagcctggagaccaacaagaggaagctggagagcaaaatccaggagcacctggag
aagaagggaccccagatggacaatgcaggacttgctgctgatgactttagagtcaagtac
gagacagagctggtcatgcgccagtctgtggagaacgacatccatgggctctgcaaggtc
atggatggcaccaatgtcactcggatgcagctggagacacagttcgaggctctcaaggag
gagctgctcttaatgaagaagaaccacgaagagcaagtgaaaggccggcaagcccagatt
gcagctctggatagacctggactcgatgagaaatctgaaggccagcttggagaacagcct
gagggaggtggaagcccgctacgccctgcagatggaacagctcaacgggatcctgttgca
cctggagtcagagctggcacagacctgggcagaggggtagcgccaggcgcaggagtacga
gtccctgctgaacatcagggtcaagctggaggctga

>gi568815589r:30731884_30932225|GENSCAN_predicted_peptide_5|176_aa
MDEYSKLIPVQQHVAEKIPENVELTLELGNRQRLEQFGRLRRTQENLWLKGANVQLGLWL
QRMEALSLDSFHVVLSLTGAQKSRTEVWEPPPRFQQMYRNDWLPSQKFAAGMGLSWRTSA
RAVQKGNVGSEPPHRVPTRALLRGAVRRGSSSSRPHNGRSTDSLHCMPGKAADTQC

>gi568815589r:30731884_30932225|GENSCAN_predicted_CDS_5|531_bp
atggacgaatacagtaaattgataccagtacagcagcatgttgctgaaaagatacctgaa
aatgtggaattgactttggaactcggtaacaggcagaggttggaacaatttggaaggctc
agaagaacacaagaaaatctatggctgaaaggggccaatgtacagcttggtctgtggctt
cagaggatggaagccctaagcctggacagcttccacgtggtgttgagccttacaggtgca
cagaagtcaagaactgaggtttgggaacctccacctagatttcagcagatgtatagaaat
gactggttacccagtcaaaagtttgctgcagggatggggctgtcatggagaacctctgct
agggcagtacagaagggaaatgtggggtcagaacccccacacagagttcctactagggca
ctgctcagaggagctgtgagaagagggtcatcgtcttccagaccccacaatggtagatcc
actgacagcttgcactgtatgcctggaaaagccgcagacactcaatgctag

>gi568815589r:30731884_30932225|GENSCAN_predicted_peptide_6|133_aa
MGLFKVAPKELSPVRASKMTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKLVIR
NIVEATAVRDISEASVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRSHEARKDRTPPPRFR
PAGAAPRPPPKPL

>gi568815589r:30731884_30932225|GENSCAN_predicted_CDS_6|402_bp
atggggctttttaaggtagctccaaaagagctctctccggtccgtgcctcgaagatgaca
aagaaaagaaggaacaacggtcgtgccaaaaagggccgcggccacgtgcagcctattcgc
tgcactaactgtgcccgatgtgtgcccaaggacaaggccattaagaaattggtcattcga
aacatagtggaggccacagcagtcagggacatttctgaagcaagcgtcttcgatgcctac
gtgcttcccaagctgtatgtgaagctgcattactgtgtgagttgtgcaatccacagcaaa
gtagtcaggaatcgatctcatgaagcccgcaaggaccgaacacccccaccccgatttaga
cctgctggtgctgccccacgtcccccaccaaagcccttgtaa

>gi568815589r:30731884_30932225|GENSCAN_predicted_peptide_7|197_aa
MEEDSIPQLHLSIQLMIRSPRHPPVPQFLPKLNSKLQVEALGKKTRSKGPRSRQQSLKGI
VQEAVKTVFILILILRAVRCASLEGGDKQPAGTRSPEKLQPACTLGGMCTGVEAQRFTPF
AVGFYGFRSNINRTEDKNHIVISIDAEKAFDKIQQCFMLKTLNKVGIDEMYIKIIRAIYD
KPTVNIILNGQKLEAFP

>gi568815589r:30731884_30932225|GENSCAN_predicted_CDS_7|594_bp
atggaggaggactcaattccacagcttcaccttagcattcagcttatgataaggagtcca
cgacaccccccagtgccacagtttcttcccaaactcaattccaagcttcaggttgaagcc
ctaggaaagaaaactagatctaagggacctagaagcagacaacagagtttaaaaggcata
gtgcaggaagcagttaaaacagtcttcatccttatccttattctaagagcagttagatgt
gcctctttagaagggggcgataaacaaccagctgggacgaggtccccggaaaaactccaa
ccagcctgcacactgggaggaatgtgcactggggtggaggcacagaggttcacaccattt
gcagtgggtttttatggttttaggtctaacataaacagaaccgaagacaaaaaccatata
gttatctcaatagatgcagaaaaggcctttgacaaaattcaacagtgcttcatgctaaaa
actctcaataaagtaggtattgatgagatgtatatcaaaataataagagctatttatgac
aaacccacagtcaatatcatactgaatgggcaaaaactggaagcattcccttga

>gi568815589r:30731884_30932225|GENSCAN_predicted_peptide_8|50_aa
MTVVKVLWLASPLEYWDQWTRNILAPPVQQVLNFKGPGDKAGDLVPVRQS

>gi568815589r:30731884_30932225|GENSCAN_predicted_CDS_8|153_bp
atgacagtagtgaaagtgctttggctggcatccccactggagtattgggaccagtggacc
aggaacatcttggcccctccagtgcagcaggttcttaacttcaagggtccaggggacaaa
gctggggacctcgtgccagtccgccagagctag

>gi568815589r:30731884_30932225|GENSCAN_predicted_peptide_9|82_aa
MSLASGDALGHFYSWQKVKQEQASHMANEKAKEMEALHSFKHQDLTKTESKNSLSVQGQH
QAIHEESAPMIQTPPTMPYLQY

>gi568815589r:30731884_30932225|GENSCAN_predicted_CDS_9|249_bp
atgtctttggcttctggtgatgccttagggcatttttactcatggcagaaggtgaagcag
gagcaggcaagtcacatggctaatgagaaagcgaaagaaatggaggcgctacactctttt
aaacatcaagatcttacaaaaactgaaagcaaaaactcactctcagtgcaaggacagcac
caagctattcatgaggaatctgcccccatgatccaaacacctcccaccatgccctacctc
caatattag