GENSCAN 1.0 Date run: 6-Nov-116 Time: 15:50:07 Sequence gi568815589r:21202166_21227606 : 25441 bp : 37.42% C+G : Isochore 1 ( 0 - 43 C+G%) Parameter matrix: HumanIso.smat Predicted genes/exons: Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr.. ----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------ 1.02 PlyA - 375 370 6 1.05 1.01 Sngl - 4932 4363 570 0 0 59 48 285 0.748 17.44 1.00 Prom - 5188 5149 40 -7.95 2.06 PlyA - 5303 5298 6 1.05 2.05 Term - 7510 7187 324 1 0 56 55 282 0.606 15.48 2.04 Intr - 9001 8862 140 2 2 71 72 84 0.757 4.36 2.03 Intr - 9323 9185 139 2 1 43 31 106 0.654 -0.48 2.02 Intr - 9761 9717 45 2 0 92 80 55 0.509 2.79 2.01 Init - 15140 14715 426 2 0 59 40 313 0.576 18.85 2.00 Prom - 15396 15357 40 -9.55 3.00 Prom + 15667 15706 40 -4.85 3.01 Init + 18956 20556 1601 1 2 42 53 376 0.474 21.42 Suboptimal exons with probability > 0.800 Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr.. ----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------ NO EXONS FOUND AT GIVEN PROBABILITY CUTOFF Predicted peptide sequence(s): Predicted coding sequence(s): >gi568815589r:21202166_21227606|GENSCAN_predicted_peptide_1|189_aa MALSFSLLMAVLVLSYKSICSLGCDLPQTHSLGNRRALILLGQMGRISPFSCLKDRHDFR IPQEEFDGNQFQKAQAISVLHEMIQQTFNLFSTEDSSAAWEQSLLEKFSTELYQQLNDLE ACVIQEVGVEETPLMNEDSILAVRKYFQRITLYLIERKYSPCAWEVVRAEIMRSLSFSTN LQKRLRRKD >gi568815589r:21202166_21227606|GENSCAN_predicted_CDS_1|570_bp atggccctgtccttttctttacttatggccgtgctggtgctcagctacaaatccatctgt tctctaggctgtgatctgcctcagacccacagcctgggtaataggagggccttgatactc ctgggacaaatgggaagaatctctcctttctcctgcctgaaggacagacatgatttccga atcccccaggaggagtttgatggcaaccagttccagaaggctcaagccatctctgtcctc catgagatgatccagcagaccttcaatctcttcagcacagaggactcatctgctgcttgg gaacagagcctcctagaaaaattttccactgaactttaccagcaactgaatgacctggaa gcatgtgtgatacaggaggttggggtggaagagactcccctgatgaatgaggactccatc ctggctgtgaggaaatacttccaaagaatcactctttatctaatagagaggaaatacagc ccttgtgcctgggaggttgtcagagcagaaatcatgagatccctctcgttttcaacaaac ttgcaaaaaagattaaggaggaaggattga >gi568815589r:21202166_21227606|GENSCAN_predicted_peptide_2|357_aa MALSFSLLMAVLVLSYKSICSLGCDLPQTHSLGNRRALILLAQMGRISHFSCLKDRYDFG FPQEVFDGNQFQKAQAISAFHEMIQQTFNLFSTKDSSAAWDETLLDKFYIELFQQLNDLE ACVTQEVGVEEIALMNEDSILATQGSRDKTAAVAVAERRGDNQELRGEQCGHSSVRQLLC FGDLEQPLFLTDFPEPGDSKGKSWLLQYAGGPIQTIVTSHFSVPEDINSEGYETVKMGTC PSPWELCSREEHLGTSGPNVQNLHFLVSQGQKRLQVPPGDVDGSQLQKAQALSVLHEMLQ QIFSLFPTERSSAAWNMTLLDQLHTGFHQQLECLESCLGQATGEEESVGVFGALHWP >gi568815589r:21202166_21227606|GENSCAN_predicted_CDS_2|1074_bp atggccctgtccttttctttactgatggccgtgctggtgctcagctacaaatccatctgt tctctgggctgtgatctgcctcagactcacagcctgggtaataggagggccttgatactc ctggcacaaatgggaagaatctctcatttctcctgcctgaaggacagatatgatttcgga ttcccccaggaggtgtttgatggcaaccagttccagaaggctcaagccatctctgccttc catgagatgatccagcagaccttcaatctcttcagcacaaaggattcatctgctgcttgg gatgagaccctcctagacaaattctacattgaacttttccagcaactgaatgacctagaa gcctgtgtgacacaggaggttggggtggaagagattgccctgatgaatgaggactccatc ctggctacccaaggcagcagggataaaactgctgctgtggcagtggcagagaggagaggt gacaaccaggaactgcgtggagaacagtgtggccactcttctgtgaggcagttgctctgt tttggggatctggagcagccgctattccttacagacttcccagagcctggagacagcaag ggcaagagctggctgctgcaatatgctgggggtccaatccagaccatagtcacctcacat ttttcagtacctgaagatatcaacagtgaaggctatgaaacagtgaagatggggacctgc ccctccccctgggagctctgttccagagaggaacaccttggcacttctgggccaaatgtg cagaatctccactttcttgtgtctcaaggacagaagagacttcaggttccccctggagat gtggatggcagccagttgcagaaggcccaggccctgtctgtcctccatgagatgcttcag cagatcttcagcctcttccccacagagcgctcctctgctgcctggaacatgaccctcctg gaccagctccacactggatttcatcagcagctcgaatgcctggagtcttgcttagggcag gcaacaggagaggaagaatctgtgggggtgtttggggccctacactggccttga >gi568815589r:21202166_21227606|GENSCAN_predicted_peptide_3|534_aa MIISIIAEKAFDKIQQPFMLKTLNKLGIDGTYLKIIRAIYDKPTANVILNGQKLEAFSLK TGTRQGYPLSPLLFNIVLEDLASAIRQKEIKCIQLEKEEIKLSLFADDMIVYLENSIFSA PNLLKLISNFSKVSGYKINVQKSQALLYTNNRQTESQIMSELPFTIASKRIKYLGIQLTR DMKELFKENYKPLLNEIKEDTNKWKNIPCSWVGRINTVKMAIRPKVIYRFSAIPIKLPMT FFTELEKTSLKFIWNQKRARTTKSILSQKNKAGGITLPDFKLYYKPTVTKTAWYWYQNRD IDQWNRTEPSEITLHIYMYLIFDKPEKNKQWGKDSLFHKWCWENWLAICRKLKLDPFLTP YTKINSRWIKDLNVRPKTIRTLEENLGITIQDIGMGKDFMSKTPKAMATKAKIDKWDLIK LKSFCTAKETTIRVNRQPTKWEKIFTTYLSDKGLISRIYNELKQIYKKKTNNPIKKWAKD MNRHFSKEDIYAAKRHMKKCSSSLAIREMQIKTTMRYHLTPVRIAIIKKSGNNS >gi568815589r:21202166_21227606|GENSCAN_predicted_CDS_3|1602_bp atgattatctcaataattgcagaaaaggcctttgacaaaattcaacaacccttcatgcta aaaactctcaataaattaggtattgatgggacgtatctcaaaataataagagctatctat gacaaacccacagccaatgtcatactgaatgggcaaaaactggaagcattctctttgaaa actggcacaagacagggataccctctctcaccactcctattcaacatagtgttggaagat ctggccagtgcaattaggcagaaggaaataaagtgtattcaactagaaaaagaggaaatc aaattgtccctgtttgcagatgacatgattgtatatctagaaaactccattttctcagcc ccaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgta caaaaatcacaagcactcttatacaccaataacagacaaacagagagccaaatcatgagt gaactgccattcacaattgcttcaaagagaataaaatacttaggaatccaactgacaagg gatatgaaggaactcttcaaggagaactacaaaccactgctcaatgaaataaaagaggat acaaacaaatggaagaacattccatgctcatgggtaggaagaatcaatactgtgaaaatg gccatacggcccaaggtaatttatagattcagtgccatccccatcaagctaccaatgact ttcttcacagaattggaaaaaactagtttaaagttcatatggaaccaaaaaagagcccgc accaccaagtcaatcctaagccaaaagaacaaagctggaggcatcacgctacctgacttc aaactatactacaagcctacagtaaccaaaacagcatggtactggtaccaaaacagagat atagatcaatggaacagaacagagccctcagaaataacgctgcatatctacatgtatctg atctttgacaaacctgagaaaaacaagcaatggggaaaggattccctatttcataaatgg tgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttccttacacct tatacaaaaattaattcaagatggattaaagacttaaacgttagacctaaaaccataaga accctagaagaaaacctaggcattaccattcaggacataggcatgggcaaggacttcatg tctaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatctaattaaa ctaaagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaacctacaaaa tgggagaaaattttcacaacctacttatctgacaaagggctaatatccagaatctacaat gaactcaaacaaatttacaagaaaaaaaccaacaaccccatcaaaaagtgggcaaaggat atgaacagacacttctcaaaagaagacatttatgcagccaaaagacacatgaaaaaatgc tcatcatcactggccatcagagaaatgcaaatcaaaaccaccatgagataccatctcaca ccagttagaatagcaatcattaaaaagtcaggaaacaacagn