GENSCAN 1.0 Date run: 6-Nov-116 Time: 04:27:27 Sequence gi568815589r:21187532_21227606 : 40075 bp : 38.89% C+G : Isochore 1 ( 0 - 43 C+G%) Parameter matrix: HumanIso.smat Predicted genes/exons: Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr.. ----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------ 1.12 PlyA - 373 368 6 1.05 1.11 Term - 3609 3286 324 0 0 49 55 253 0.562 11.88 1.10 Intr - 5099 4960 140 0 2 71 72 96 0.762 5.56 1.09 Intr - 5421 5283 139 0 1 50 31 150 0.950 4.62 1.08 Intr - 5858 5814 45 2 0 94 75 65 0.712 3.49 1.07 Intr - 14472 14209 264 0 0 32 40 275 0.001 13.89 1.06 Intr - 19404 19141 264 0 0 31 40 292 0.002 15.49 1.05 Intr - 22144 21848 297 1 0 56 -11 289 0.013 11.95 1.04 Intr - 23635 23496 140 2 2 71 72 84 0.757 4.36 1.03 Intr - 23957 23819 139 2 1 43 31 106 0.654 -0.48 1.02 Intr - 24395 24351 45 2 0 92 80 55 0.509 2.79 1.01 Init - 29774 29349 426 2 0 59 40 313 0.576 18.85 1.00 Prom - 30030 29991 40 -9.55 2.00 Prom + 30301 30340 40 -4.85 2.01 Init + 33590 35190 1601 1 2 42 53 376 0.474 21.42 Suboptimal exons with probability > 0.800 Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr.. ----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------ S.001 Init - 6364 6359 6 1 0 77 99 0 0.865 1.03 S.002 Sngl - 14634 14065 570 0 0 59 48 306 0.839 18.66 Predicted peptide sequence(s): Predicted coding sequence(s): >gi568815589r:21187532_21227606|GENSCAN_predicted_peptide_1|740_aa MALSFSLLMAVLVLSYKSICSLGCDLPQTHSLGNRRALILLAQMGRISHFSCLKDRYDFG FPQEVFDGNQFQKAQAISAFHEMIQQTFNLFSTKDSSAAWDETLLDKFYIELFQQLNDLE ACVTQEVGVEEIALMNEDSILATQGSRDKTAAVAVAERRGDNQELRGEQCGHSSVRQLLC FGDLEQPLFLTDFPEPGDSKGKSWLLQYAGGPIQTIVTSHFSVPEDINSEGYETVKMGTC PSPWELCSREEHLGTSGPNVQNLHFLVSQGQKRLQVPPGDVDGSQLQKAQALSVLHEMLQ QIFSLFPTERSSAAWNMTLLDQLHTGFHQQLECLESCLGQATGEEESVGDRHDFRIPQEE FDGNQFQKAQAISVLHEMIQQTFNLFSTEDSSAAWEQSLLEKFSTELYQQLNDLEACVIQ EVGVEETPLMNEDSILADRHEFRFPEEEFDGHQFQKTQAISVLHEMIQQTFNLFSTEDSS AAWEQSLLEKFSTELYQQLNDLEACVIQEVGVEETPLMNEDFILATQGSKDKTAAVAVAE RRGDNQELRGEQCGHSSVRQLLCFGDLEQPLFPTDSPEPGDSKGKSWLLQYAGGPIQTIV TSHFSVPEDINSEGYETVKMGTCPSLWELCSREEHLGTSGPNVQNLHFLVSQGQKRLQVP PGDVDGSHLQKAQAVSVLHEMLQQIFSLFPTERSSAAWNMTLLDQLHTGFHQQLECLESC LGQATGEEESVGVIGALYWP >gi568815589r:21187532_21227606|GENSCAN_predicted_CDS_1|2223_bp atggccctgtccttttctttactgatggccgtgctggtgctcagctacaaatccatctgt tctctgggctgtgatctgcctcagactcacagcctgggtaataggagggccttgatactc ctggcacaaatgggaagaatctctcatttctcctgcctgaaggacagatatgatttcgga ttcccccaggaggtgtttgatggcaaccagttccagaaggctcaagccatctctgccttc catgagatgatccagcagaccttcaatctcttcagcacaaaggattcatctgctgcttgg gatgagaccctcctagacaaattctacattgaacttttccagcaactgaatgacctagaa gcctgtgtgacacaggaggttggggtggaagagattgccctgatgaatgaggactccatc ctggctacccaaggcagcagggataaaactgctgctgtggcagtggcagagaggagaggt gacaaccaggaactgcgtggagaacagtgtggccactcttctgtgaggcagttgctctgt tttggggatctggagcagccgctattccttacagacttcccagagcctggagacagcaag ggcaagagctggctgctgcaatatgctgggggtccaatccagaccatagtcacctcacat ttttcagtacctgaagatatcaacagtgaaggctatgaaacagtgaagatggggacctgc ccctccccctgggagctctgttccagagaggaacaccttggcacttctgggccaaatgtg cagaatctccactttcttgtgtctcaaggacagaagagacttcaggttccccctggagat gtggatggcagccagttgcagaaggcccaggccctgtctgtcctccatgagatgcttcag cagatcttcagcctcttccccacagagcgctcctctgctgcctggaacatgaccctcctg gaccagctccacactggatttcatcagcagctcgaatgcctggagtcttgcttagggcag gcaacaggagaggaagaatctgtgggggacagacatgatttccgaatcccccaggaggag tttgatggcaaccagttccagaaggctcaagccatctctgtcctccatgagatgatccag cagaccttcaatctcttcagcacagaggactcatctgctgcttgggaacagagcctccta gaaaaattttccactgaactttaccagcaactgaatgacctggaagcatgtgtgatacag gaggttggggtggaagagactcccctgatgaatgaggactccatcctggctgacagacat gaattcagattcccagaggaggagtttgatggccaccagttccagaagactcaagccatc tctgtcctccatgagatgatccagcagaccttcaatctcttcagcacagaggactcatct gctgcttgggaacagagcctcctagaaaaattttccactgaactttaccagcaactgaat gacctggaagcatgtgtgatacaggaggttggggtggaagagactcccctgatgaatgag gacttcatcctggctacccaaggcagcaaggataaaactgctgctgtggcagtggcagag aggagaggtgacaaccaggaactgcgtggagaacagtgtggccactcttctgtgaggcag ttgctctgttttggggatctggagcagccgctgttccctacagactccccagagcctgga gacagcaagggcaagagctggctgctgcaatatgctgggggtccaatccagaccatagtc acctcacatttttcagtacctgaagatatcaacagtgaaggctatgaaacagtgaagatg gggacctgcccctccctctgggagctctgttccagagaggaacaccttggcacttctggg ccaaatgtgcagaatctccactttcttgtgtctcaaggacagaagagacttcaggttccc cctggagatgtggatggcagtcatttgcagaaggcccaggctgtgtctgtcctccatgag atgcttcagcagatcttcagcctcttccccacagagcgctcctctgctgcctggaacatg accctcctggaccagctccacactggatttcatcagcagctcgaatgcctggagtcttgc ttagggcaggcaacaggagaggaagaatctgtgggggtgattggggccctatactggcct tga >gi568815589r:21187532_21227606|GENSCAN_predicted_peptide_2|534_aa MIISIIAEKAFDKIQQPFMLKTLNKLGIDGTYLKIIRAIYDKPTANVILNGQKLEAFSLK TGTRQGYPLSPLLFNIVLEDLASAIRQKEIKCIQLEKEEIKLSLFADDMIVYLENSIFSA PNLLKLISNFSKVSGYKINVQKSQALLYTNNRQTESQIMSELPFTIASKRIKYLGIQLTR DMKELFKENYKPLLNEIKEDTNKWKNIPCSWVGRINTVKMAIRPKVIYRFSAIPIKLPMT FFTELEKTSLKFIWNQKRARTTKSILSQKNKAGGITLPDFKLYYKPTVTKTAWYWYQNRD IDQWNRTEPSEITLHIYMYLIFDKPEKNKQWGKDSLFHKWCWENWLAICRKLKLDPFLTP YTKINSRWIKDLNVRPKTIRTLEENLGITIQDIGMGKDFMSKTPKAMATKAKIDKWDLIK LKSFCTAKETTIRVNRQPTKWEKIFTTYLSDKGLISRIYNELKQIYKKKTNNPIKKWAKD MNRHFSKEDIYAAKRHMKKCSSSLAIREMQIKTTMRYHLTPVRIAIIKKSGNNS >gi568815589r:21187532_21227606|GENSCAN_predicted_CDS_2|1602_bp atgattatctcaataattgcagaaaaggcctttgacaaaattcaacaacccttcatgcta aaaactctcaataaattaggtattgatgggacgtatctcaaaataataagagctatctat gacaaacccacagccaatgtcatactgaatgggcaaaaactggaagcattctctttgaaa actggcacaagacagggataccctctctcaccactcctattcaacatagtgttggaagat ctggccagtgcaattaggcagaaggaaataaagtgtattcaactagaaaaagaggaaatc aaattgtccctgtttgcagatgacatgattgtatatctagaaaactccattttctcagcc ccaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgta caaaaatcacaagcactcttatacaccaataacagacaaacagagagccaaatcatgagt gaactgccattcacaattgcttcaaagagaataaaatacttaggaatccaactgacaagg gatatgaaggaactcttcaaggagaactacaaaccactgctcaatgaaataaaagaggat acaaacaaatggaagaacattccatgctcatgggtaggaagaatcaatactgtgaaaatg gccatacggcccaaggtaatttatagattcagtgccatccccatcaagctaccaatgact ttcttcacagaattggaaaaaactagtttaaagttcatatggaaccaaaaaagagcccgc accaccaagtcaatcctaagccaaaagaacaaagctggaggcatcacgctacctgacttc aaactatactacaagcctacagtaaccaaaacagcatggtactggtaccaaaacagagat atagatcaatggaacagaacagagccctcagaaataacgctgcatatctacatgtatctg atctttgacaaacctgagaaaaacaagcaatggggaaaggattccctatttcataaatgg tgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttccttacacct tatacaaaaattaattcaagatggattaaagacttaaacgttagacctaaaaccataaga accctagaagaaaacctaggcattaccattcaggacataggcatgggcaaggacttcatg tctaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatctaattaaa ctaaagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaacctacaaaa tgggagaaaattttcacaacctacttatctgacaaagggctaatatccagaatctacaat gaactcaaacaaatttacaagaaaaaaaccaacaaccccatcaaaaagtgggcaaaggat atgaacagacacttctcaaaagaagacatttatgcagccaaaagacacatgaaaaaatgc tcatcatcactggccatcagagaaatgcaaatcaaaaccaccatgagataccatctcaca ccagttagaatagcaatcattaaaaagtcaggaaacaacagn