GENSCAN 1.0	Date run:  5-Nov-116	Time: 23:12:51

Sequence gi568815588r:98329538_98543240 : 213703 bp : 45.02% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  22521  22833  313  2  1   75   35   139 0.558   4.80
 1.02 Intr +  25534  25662  129  2  0   88   89   103 0.855  11.07
 1.03 Term +  38658  38755   98  1  2  129   52    85 0.712   7.13
 1.04 PlyA +  39522  39527    6                               1.05

 2.18 PlyA -  41521  41516    6                               1.05
 2.17 Term -  54630  54485  146  1  2   92   53    51 0.756   0.07
 2.16 Intr -  55530  55410  121  0  1  112  105   103 0.988  14.47
 2.15 Intr -  57770  57664  107  0  2   65   63   139 0.999   9.03
 2.14 Intr -  58971  58817  155  2  2  101   88   145 0.996  15.52
 2.13 Intr -  60950  60873   78  1  0   42  110    63 0.838   2.57
 2.12 Intr -  61217  61061  157  0  1  112   91   145 0.996  16.27
 2.11 Intr -  61545  61473   73  0  1   86   95    67 0.994   6.18
 2.10 Intr -  63029  62895  135  2  0   48   94   138 0.998  11.16
 2.09 Intr -  63546  63405  142  2  1   65   61    86 0.518   3.96
 2.08 Intr -  65756  65659   98  2  2  110   92    34 0.997   4.81
 2.07 Intr -  65915  65854   62  0  2   89  113    40 0.959   5.05
 2.06 Intr -  67961  67808  154  2  1    4  111   176 0.656  11.15
 2.05 Intr -  70720  70565  156  1  0   90   91   157 0.975  16.41
 2.04 Intr -  78118  78045   74  2  2   81   97    60 0.997   5.33
 2.03 Intr -  78460  78367   94  1  1   64   99   163 0.988  14.54
 2.02 Intr -  81421  81402   20  2  2  114   68    38 0.935   0.73
 2.01 Init -  85598  85472  127  2  1   90  103   124 0.990  12.47
 2.00 Prom -  86702  86663   40                              -7.46

 3.20 PlyA -  87512  87507    6                               1.05
 3.19 Term -  88189  88027  163  0  1  129   47   294 0.999  26.81
 3.18 Intr -  88720  88638   83  1  2  117   66   114 0.995  10.54
 3.17 Intr -  90621  90508  114  0  0   93   78   190 0.807  19.14
 3.16 Intr -  92984  92832  153  2  0    8   86   166 0.442   8.67
 3.15 Intr -  93222  93150   73  2  1   74   57    39 0.396  -1.19
 3.14 Intr -  94350  94216  135  2  0  105  115   101 0.678  14.18
 3.13 Intr -  94837  94776   62  1  2  104   64     9 0.561  -2.37
 3.12 Intr -  96183  96004  180  0  0   89   94   227 0.879  23.46
 3.11 Intr -  96448  96281  168  1  0  108   53   139 0.957  12.54
 3.10 Intr -  97727  97678   50  0  2   74  109    43 0.960   3.40
 3.09 Intr - 100105 100036   70  1  1  104   94    34 0.962   4.35
 3.08 Intr - 100352 100254   99  2  0   71   78    80 0.980   5.61
 3.07 Intr - 101133 100965  169  2  1   82   52   181 0.726  13.85
 3.06 Intr - 101754 101594  161  0  2   87   71   231 0.954  20.09
 3.05 Intr - 104554 104446  109  0  1   95   47   211 0.992  17.99
 3.04 Intr - 105877 105735  143  1  2   95   64   267 0.999  24.15
 3.03 Intr - 106235 106098  138  2  0   91  105   267 0.999  29.36
 3.02 Intr - 113703 113587  117  0  0  123  105   163 0.993  22.16
 3.01 Init - 117505 117350  156  1  0   70  104    63 0.768   4.01
 3.00 Prom - 118557 118518   40                              -7.06

 4.07 PlyA - 119415 119410    6                               1.05
 4.06 Term - 130202 130037  166  1  1  105   43   204 0.992  14.99
 4.05 Intr - 138531 138296  236  0  2   33   75   122 0.220   1.89
 4.04 Intr - 142914 142785  130  2  1   12   68    92 0.044   0.30
 4.03 Intr - 153245 153099  147  1  0   60   70   163 0.137  11.05
 4.02 Intr - 160659 160514  146  0  2  141  108    88 0.992  15.18
 4.01 Init - 187180 187166   15  1  0  102   94    -1 0.071   2.27
 4.00 Prom - 191830 191791   40                              -6.46

 5.00 Prom + 192125 192164   40                              -1.76
 5.01 Init + 212834 213545  712  1  1   88   58   443 0.843  36.37

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 153245 153083  163  1  1   60   48   200 0.856  10.61


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588r:98329538_98543240|GENSCAN_predicted_peptide_1|179_aa
MSSGESPVLKDVMARATEFCSSKDEKTFCVCPNQEGKQQVWRVLNFDKFQRLSDKNQGEI
PGGRGNQGKCLSPGRRGEVNGRTRLPRMFVSELDHGRDLRVNLIGEVKDRVPTCEAVSVT
NQRFHFHLHNFQGTDSSSDKYDQRPSYGWHCTEMEPDETAPFERLLYRVGSASCSCAPR

>gi568815588r:98329538_98543240|GENSCAN_predicted_CDS_1|540_bp
atgagctcaggcgaaagtcctgtcttgaaagatgtgatggctcgagctacggaattctgt
tccagcaaggatgagaaaacattctgtgtctgtccaaaccaagaaggaaagcaacaagta
tggagggttttaaactttgacaagttccagaggctcagtgataagaaccagggagagatt
ccagggggtagaggcaatcaagggaaatgtctgagcccaggaagaagaggggaggtgaat
ggcaggacccggttaccaaggatgttcgtgtctgagttagaccatggaagagacctccgt
gtgaacctgataggtgaggtcaaggatagagtccccacatgtgaggctgtgtcagtcacc
aaccagagattccacttccacctccacaacttccagggcacagactcctcatctgacaaa
tatgaccaaagacctagctatggctggcactgcacagagatggaacctgatgaaacggcc
ccatttgagcgcctgctgtatcgcgttggctctgcttcctgcagctgtgctccaagatga

>gi568815588r:98329538_98543240|GENSCAN_predicted_peptide_2|632_aa
MAASGRGLCKAVAASPFPAWRRDNTEARGGLKPEYDAVVIGAGHNGLVAAAYLQRLGVNT
AVFERRHVIGGAAVTEEIIPGFKFSRASYLLSLLRPQIYTDLELKKHGLRLHLRNPYSFT
PMLEEGAGSKVPRCLLLGTDMAENQKQIAQFSQKDAQVFPKYEEFMHRLALAIDPLLDAA
PVDMAAFQHGSLLQRMRSLSTLKPLLKAGRILGAQLPRYYEVLTAPITKVLDQWFESEPL
KATLATDAVIGAMTSPHTPGSGYVLLHHVMGGLEGMQGAWGYVQGGMGALSDAIASSATT
HGASIFTEKTVAKVQVNSEGCVQGVVLEDGTEVRSKMVLSNTSPQITFLKLTPQEWLPEE
FLERISQLDTRSPVTKINVAVDRLPSFLAAPNAPRGQPLPHHQCSIHLNCEDTLLLHQAF
EDAMDGLPSHSDLGSAKIHTPKDRKCIPGEKSEDEGRPVIELCIPSSLDPTLAPPGCHVV
SLFTQYMPYTLAGGKAWDEQERDAYADRVFDCIEVYAPGFKDSVVGRDILTPPDLERIFG
LPGGNIFHCAMSLDQLYFARPVPLHSGYRCPLQGLYLCGSGAHPAPYSEILTSLTKRVPI
QHVHPQPLRLWAVDLAPPQTFGAGSLEGARIY

>gi568815588r:98329538_98543240|GENSCAN_predicted_CDS_2|1899_bp
atggctgcaagtggccgaggtctctgcaaggctgtggccgcctctcccttcccggcgtgg
agacgagataacacggaagccaggggaggtctgaagcctgagtatgatgcggtggtgata
ggagcaggacacaacggactggtggctgcagcgtacctgcagagactgggggtgaacacc
gccgtcttcgagaggcgccatgtgatcgggggtgcagctgtcactgaggagatcatccca
gggtttaagttctcccgcgcgtcctacctgctcagcctgctgaggccgcagatttacact
gatctggagctgaagaaacatgggctgaggcttcatcttcgaaacccctactccttcacc
cccatgctggaagagggtgcaggcagcaaggtgcccaggtgccttctgctgggcacagac
atggcagaaaaccagaagcagatcgcccagttctcccagaaggatgcccaggtctttccc
aaatatgaggagttcatgcatcgcttggcattagccattgaccctctgctggatgcggcc
cccgtggacatggcggccttccagcatggctccttgctgcaaaggatgaggtcgctctcc
accctcaagcccctgctgaaggcaggccgcatcctgggagcccagcttccccgatattat
gaggtcctcacagctcccattaccaaggtgctggatcagtggttcgagtctgagccttta
aaagccactctagccacagatgcagtgattggagccatgacaagtccccacactccgggg
agtgggtatgtgctgctgcaccatgtgatggggggcctggagggaatgcagggggcctgg
ggctacgtccaggggggcatgggtgccctctctgatgcgatcgcaagctcagccaccaca
catggagcaagcatcttcactgaaaagacagtggcgaaggtgcaggtgaacagtgaaggc
tgtgttcaaggagttgtgctggaagatggcacagaggtgagaagcaaaatggtgctgtcc
aacacatcaccgcagatcaccttcctgaagctgacgccacaggagtggcttcctgaggag
ttcctggagagaatctctcagctggacacccggtcgcctgtcaccaagatcaatgtggcc
gtagacaggctgcccagcttcctggcggcccccaatgctcccaggggccagccgctgccc
catcaccaatgctccatccacctgaactgtgaagacaccctcctccttcatcaggccttt
gaagatgccatggatggcctgccttcccacagtgacttaggatctgccaaaatccatact
cctaaggacaggaagtgcatcccaggtgaaaaatctgaggatgagggcaggcctgtgatt
gagctctgcatcccttcctcgctggaccccaccctggctccccctggctgccatgtagtc
tccctcttcactcagtacatgccctatacgctggctggaggcaaggcctgggacgagcag
gagagagacgcttatgcagacagagtgtttgattgcatcgaggtctatgcccctggcttc
aaggactctgtggttggcagagacatcctcacaccaccagatttggagagaatcttcggg
cttcctggagggaacatattccactgcgccatgtccctggaccagctctacttcgcccgc
cccgtgcccctgcattctggctaccgctgccctctccagggcctgtatctctgtggaagt
ggggctcatcctgccccttattctgaaattttaacttcacttactaagcgtgtgcccatc
cagcacgtccaccctcagccgttgagactgtgggctgtggacctggcccctccccagacc
tttggtgcaggaagcctggagggagccagaatctattga

>gi568815588r:98329538_98543240|GENSCAN_predicted_peptide_3|780_aa
MGKAWQGRGSNPRKATAAPAPPGAGGHVRDHAVLPGSAPGLLQAGRCARRDPMKCVLVAT
EGAEVLFYWTDQEFEESLRLKFGQSENEEEELPALEDQLSTLLAPVIISSMTMLEKLSDT
YTCFSTENGNFLYVLHLFGECLFIAINGDHTESEGDLRRKLYVLKYLFEVHFGLVTVDGH
LIRKELRPPDLAQRVQLWEHFQSLLWTYSRLREQEQCFAVEALERLIHPQLCELCIEALE
RHVIQAVNTSPERGGEEALHAFLLVHSKLLAFYSSHSASSLRPADLLALILLVQDLYPSE
STAEDDIQVSGQLSGQREAIREVVQKTCLKMPSPRRARSSQNIPVQQAWSPHSTGPTGGS
SAETETDSFSLPEEYFTPAPSPGDQSSGSTIWLEGGTPPMDALQIAEDTLQTLVPHCPVP
SGPRRIFLDANVKESYCPLVPHTMYCLPLWQGINLVLLTRSPSAPLALVLSQLMDGFSML
EKKLKEGPEPGASLRSQPLVGDLRQRMDKFVKNRGAQEIQSTWLEFKAKAFSKSEPGSSW
ELLQACGKLKRQLCAIYRLNFLTTAPSRGGPHLPQHLQDQVQRLMRARTARVKCASVEDL
TAFQGLGSLETFTYLEDFPGLVHFIYVDRTTGQMVAPSLNCSQKTSSELGKGPLAAFVKT
KVWSLIQLARRYLQKGYTTLLFQEGDFYCSYFLWFENDMGYKLQMIEVPVLSDDSVPIGM
LGGDYYRKLLRYYSKNRPTEAVRCYELLALHLSVIPTDLLVQQAGQLARRLWEASRIPLL

>gi568815588r:98329538_98543240|GENSCAN_predicted_CDS_3|2343_bp
atgggcaaggcctggcaggggcggggctcgaacccgcggaaggcgacggcggctccggcc
cctcccggggcgggcggtcacgtgcgcgatcacgcggtcctacccggaagcgcgcccggg
ctcctgcaggcggggcgctgtgcgcgccgcgatccgatgaagtgcgtcttggtggccact
gagggcgcagaggtcctcttctactggacagatcaggagtttgaagagagtctccggctg
aagttcgggcagtcagagaatgaggaagaagagctccctgccctggaggaccagctcagc
accctcctagccccggtcatcatctcctccatgacgatgctggagaagctctcggacacc
tacacctgcttctccacggaaaatggcaacttcctgtatgtccttcacctgtttggagaa
tgcctgttcattgccatcaatggtgaccacaccgagagcgagggggacctgcggcggaag
ctgtatgtgctcaagtacctgtttgaagtgcactttgggctggtgactgtggacggtcat
cttatccgaaaggagctgcggcccccagacctggcgcagcgtgtccagctgtgggagcac
ttccagagcctgctgtggacctacagccgcctgcgggagcaggagcagtgcttcgccgtg
gaggccctggagcgactgattcacccccagctctgtgagctgtgcatagaggcgctggag
cggcacgtcatccaggctgtcaacaccagccccgagcggggaggcgaggaggccctgcat
gccttcctgctcgtgcactccaagctgctggcattctactctagccacagtgccagctcc
ctgcgcccggccgacctgcttgccctcatcctcctggttcaggacctctaccccagcgag
agcacagcagaggacgacattcaggtctcagggcagctttctgggcagagggaggccatt
agggaggtagttcagaaaacctgcctgaagatgccttccccgcggagggcccggagcagc
cagaacatccccgtgcagcaggcctggagccctcactccacgggcccaactggggggagc
tctgcagagacggagacagacagcttctccctccctgaggagtacttcacaccagctcct
tcccctggcgatcagagctcaggtagcaccatctggctggaggggggcaccccccccatg
gatgcccttcagatagcagaggacaccctccaaacactggttccccactgccctgtgcct
tccggccccagaaggatcttcctggatgccaacgtgaaggaaagctactgccccctagtg
ccccacaccatgtactgcctgcccctgtggcagggcatcaacctggtgctcctgaccagg
agccccagcgcgcccctggccctggttctgtcccagctgatggatggcttctccatgctg
gagaagaagctgaaggaagggccggagcccggggcctccctgcgctcccagcccctcgtg
ggagacctgcgccagaggatggacaagtttgtcaagaatcgaggggcacaggagattcag
agcacctggctggagtttaaggccaaggctttctccaaaagtgagcccggatcctcctgg
gagctgctccaggcatgtgggaagctgaagcggcagctctgcgccatctaccggctgaac
tttctgaccacagcccccagcaggggaggcccacacctgccccagcacctgcaggaccaa
gtgcagaggctcatgcgggccagaactgcccgtgtcaaatgtgcaagtgttgaggatctt
acagcttttcaaggcctggggagcttggagaccttcacctacctagaagacttcccaggc
ttggtgcacttcatctatgtggaccgcaccactgggcagatggtggcgccttccctcaac
tgcagtcaaaagacctcgtcggagttgggcaaggggccgctggctgcctttgtcaaaact
aaggtctggtctctgatccagctggcgcgcagatacctgcagaagggctacaccacgctg
ctgttccaggagggggatttctactgctcctacttcctgtggttcgagaatgacatgggg
tacaaactccagatgatcgaggtgcccgtcctctccgacgactcagtgcctatcggcatg
ctgggaggagactactacaggaagctcctgcgctactacagcaagaaccgcccaaccgag
gctgtcaggtgctacgagctgctggccctgcacctgtctgtcatccccactgacctgctg
gtgcagcaggccggccagctggcccggcgcctctgggaggcctcccgtatccccctgctc
tag

>gi568815588r:98329538_98543240|GENSCAN_predicted_peptide_4|279_aa
MGAIQDYWLSLLYKRLIGPKVLAVHVAGLQRKPRPGRVIRDKLRIYAHCTNHHNHNYVRG
SITLFIINLHRSRKKIKLAGTLRDKLVHQYLLQPYGQEGLKSKSTTSAAALLKGHSEPLS
RKDKLQRLRAPNGKKVPGIREIYELARGGREPAKHKQVRGRPDWRPGAAGDPEPGRAQRR
VVAGAADPAPALGPPVLCTLAGKPAPLQELQSRFARFLNIRPHSRSVQLNGQPLVMVDDG
TLPELKPRPLRAGRTLVIPPVTMGFYVVKNVNALACRYR

>gi568815588r:98329538_98543240|GENSCAN_predicted_CDS_4|840_bp
atgggggcaattcaggactactggctctctctcctctacaagcgcctgatcggccccaaa
gtcttggctgtgcatgtggctgggctccagcggaagccacggcctggccgagtgatccgg
gacaaactaaggatttatgctcactgcacaaaccaccacaaccacaactacgttcgtggg
tccattacactttttatcatcaacttgcatcgatcaagaaagaaaatcaagctggctggg
actctcagagacaagctggttcaccagtacctgctgcagccctatgggcaggagggccta
aagtccaaatcaaccacatcagctgcagcccttttgaaaggccattcagagcccctcagc
aggaaagacaagctgcagaggctgagagcaccgaatggcaagaaagtgcctgggatcagg
gagatttacgagctggctcgagggggccgggagcctgcaaagcacaaacaggtgcggggc
cgacccgactggcggccgggggcagccggggacccggagcccgggagagcccagcgccga
gtcgtggcgggcgccgcagaccccgcacctgccctgggaccccccgttctctgcacgctg
gccgggaagccggcacccctgcaggaattgcagtcccgtttcgcacgtttccttaatatt
aggccacattccaggtcagtgcaactgaatggccagcccttagtgatggtggacgacggg
accctcccagaattgaagccccgcccccttcgggccggccggacattggtcatccctcca
gtcaccatgggcttttatgtggtcaagaatgtcaatgctttggcctgccgctaccgataa

>gi568815588r:98329538_98543240|GENSCAN_predicted_peptide_5|238_aa
MGKKQSRKTGNSKKQSASPPPKERSSSPAMEQSWMENDFDELREEGFRQSNYSELWEDIQ
TKGKEVENFEKNLEEYVTRITNTEKCLKELMELKTKARELREECRSLRSRCDQLEERVSA
MEDEMNEMKREGKFREKRIKRNEQSLQETWDYVKRPNLCLIGVPESDGENGTKLENTLQD
IIQENFPNLARQANIQIQEIQRMPQRYSSRRATPRHIIVRFTKVEMKEKMLRAAREKX

>gi568815588r:98329538_98543240|GENSCAN_predicted_CDS_5|714_bp
atggggaaaaaacagagcagaaaaactggaaactctaaaaagcagagcgcctctcctcct
ccaaaggaacgcagttcctcaccagcaatggaacaaagctggatggagaatgactttgac
gagctgagagaagaaggcttcagacaatcaaattactccgagctatgggaggacattcaa
accaaaggcaaagaagttgaaaactttgaaaaaaatttagaagaatatgtaactagaata
accaatacagagaagtgcttaaaggagctgatggagctgaaaaccaaggctcgagaacta
cgtgaagaatgcagaagcctcaggagccgatgcgatcaactggaagaaagggtatcagcg
atggaagatgaaatgaatgaaatgaagcgagaagggaagtttagagaaaaaagaataaaa
agaaacgagcaaagcctccaagaaacatgggactatgtgaaaagaccaaatctatgtctg
attggtgtacctgaaagtgacggggagaatggaaccaagttggaaaacactctgcaggat
attatccaggagaacttccccaatctagcaaggcaggccaacattcagattcaggaaata
cagagaatgccacaaagatactcctcgagaagagcaactccaagacacatcattgtcaga
ttcaccaaagttgaaatgaaggaaaaaatgttaagggcagccagagagaaagnn