GENSCAN 1.0	Date run:  7-Nov-116	Time: 14:33:47

Sequence gi568815588r:70154960_70366392 : 211433 bp : 45.86% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   4005   4044   40                              -2.06
 1.01 Sngl +   8877   9095  219  2  0   60   36   230 0.959  10.16
 1.02 PlyA +  10836  10841    6                               1.05

 2.00 Prom +  11612  11651   40                              -5.06
 2.01 Sngl +  15148  15876  729  0  0   93   44   200 0.871  12.33
 2.02 PlyA +  16610  16615    6                               1.05

 3.13 PlyA -  17583  17578    6                               1.05
 3.12 Term -  20142  19990  153  0  0   56   42   107 0.609   0.82
 3.11 Intr -  38590  38465  126  1  0   49   79    51 0.120   1.18
 3.10 Intr -  51374  51305   70  1  1   85   34    68 0.265   0.28
 3.09 Intr -  54331  54246   86  1  2   56  111    48 0.938   2.52
 3.08 Intr -  54726  54599  128  1  2  117   85   167 0.999  19.70
 3.07 Intr -  58630  58504  127  1  1   74   95   147 0.999  14.25
 3.06 Intr -  59627  59541   87  2  0   61   90    59 0.921   3.57
 3.05 Intr -  62972  62853  120  2  0   45   91   104 0.905   7.09
 3.04 Intr -  63858  63805   54  0  0  136   75     4 0.659   3.08
 3.03 Intr -  75440  75382   59  0  2   95  116    13 0.717   3.40
 3.02 Intr -  78466  78305  162  2  0   53   70   178 0.664  12.45
 3.01 Init -  83865  83790   76  0  1   68   78    78 0.552   4.21
 3.00 Prom -  93260  93221   40                              -5.76

 4.07 PlyA -  93366  93361    6                               1.05
 4.06 Term - 100868  99998  871  1  1   84   55  1587 0.772 147.11
 4.05 Intr - 105780 105681  100  1  1  101  100   159 0.999  17.57
 4.04 Intr - 111432 111118  315  1  0   96  105   425 0.616  41.04
 4.03 Intr - 112197 112154   44  2  2   53   37    99 0.232  -0.82
 4.02 Intr - 117740 117637  104  2  2  112   31    50 0.409   0.67
 4.01 Init - 119175 119137   39  0  0  110   82    42 0.923   6.01
 4.00 Prom - 120231 120192   40                              -5.26

 5.05 PlyA - 120256 120251    6                               1.05
 5.04 Term - 123789 123656  134  1  2   50   48    87 0.678  -0.85
 5.03 Intr - 128950 128711  240  2  0  -38   96   155 0.318   1.22
 5.02 Intr - 134933 134895   39  0  0  120  110    49 0.994   8.50
 5.01 Init - 135140 135041  100  2  1   82   89    74 0.993   7.41
 5.00 Prom - 138285 138246   40                              -6.06

 6.05 PlyA - 139751 139746    6                               1.05
 6.04 Term - 146549 146395  155  0  2  111   47   307 0.992  26.98
 6.03 Intr - 169071 168904  168  1  0   75   95   301 0.714  29.42
 6.02 Intr - 185743 185594  150  2  0   93   80   231 0.931  22.93
 6.01 Intr - 205511 205388  124  2  1   15   64   157 0.404   6.16

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  93090  93211  122  1  2   88   38    88 0.949   2.44


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588r:70154960_70366392|GENSCAN_predicted_peptide_1|72_aa
MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIRETFCVFDKDGNGYISGVELHHVMT
NLGVKLTDEEVD

>gi568815588r:70154960_70366392|GENSCAN_predicted_CDS_1|219_bp
atgattaatgaagtagatgctgatggtaatggcacaattgacttccctgaatttctgaca
atgatggcaagaaaaatgaaagacacagacagtgaagaagaaattagagaaacattctgt
gtgtttgataaggatggcaatggctatattagtggtgtagaacttcaccatgtgatgaca
aaccttggagtgaagttaacagatgaagaagttgattaa

>gi568815588r:70154960_70366392|GENSCAN_predicted_peptide_2|242_aa
MEPFRKPERTVQTRNCYPAQQLRDPRAECKWTPGKEDSRGRSRSGQVVPSPPRISPAAPQ
NRLRVTSPPPNPARASLRSDLPAFRPSPSSPNSPPRRDPQTHGLRGSSGKTAAGSDPPSE
HTNQQHPGPPATRRMYVTPLPGTSGRVMGPAPSQRYASLPRCRPTSDSGRGGAGIRRDKA
RSGSGPASAPPAPVWLADRARRGSAGTLGPGLGPGVPERPGTLGIAASHSRRTRKVRSGY
RR

>gi568815588r:70154960_70366392|GENSCAN_predicted_CDS_2|729_bp
atggagccatttcgtaaaccggagcgcacggtacagacaagaaactgttatccggcccag
cagctgcgagacccccgagcggaatgcaagtggaccccaggcaaagaggacagcagggga
cggagcagatctggccaagttgtcccgtccccgcccagaatcagccccgcggccccacag
aaccgcctgcgtgtcacttcccccccacccaaccccgccagggccagcctccgctccgac
ctccccgccttccgtcccagcccctcgagccccaactcccctccccgacgcgaccctcag
actcacggcctgaggggctcctccggcaaaacagcggctggctcggaccctccctcagag
cacactaaccagcagcacccgggaccgccagctactcgccggatgtacgtcacacccctc
cccgggacttccgggcgcgtaatgggccccgccccctcacagcgttacgcctctctgccc
cggtgccgtcccaccagcgactcgggccgcggaggggcgggcataaggcgtgacaaagcg
cgctcggggtctggccccgcctcggccccgcctgctcccgtctggctagctgaccgcgcg
agacgtggcagcgccggaaccctgggtccggggctgggtcctggagtccctgagcggcct
ggtacactcgggatcgcggcttcccattccagacgcaccaggaaagtcagaagtgggtac
cgacggtga

>gi568815588r:70154960_70366392|GENSCAN_predicted_peptide_3|415_aa
MGNASARPPRLGGEERLCPAALHLGVLAVRRRGALSLSVGAACGLVALWQRRRQDSGTMS
GFSTEERAAPFSLEYRVFLKNEKGQYISPFHDIPIYADKDVFHMVVEVPRWSNAKMEIAT
KDPLNPIKQDVKKGKLRYVANLFPYKGYIWNYGAIPQTWEDPGHNDKHTGCCGDNDPIDV
CEIGSKVCARGEIIGVKVLGILAMIDEGETDWKVIAINVDDPDAANYNDINDVKRLKPGY
LEATVDWFRRYKVPDGKPENEFAFNAEFKDKDFAIDIIKSTHDHWKALVTKKTNGKGISC
MNTTLSESPFKCDPDAARAIVDAPLGGRKWWSLALVIRCFCPEVTHITDISLARASRMTM
PDLKVAVRIPHLHCIKPKKKAEGDAKEVKAKVKDKPRRRSAKLSLKLLLHTRAKA

>gi568815588r:70154960_70366392|GENSCAN_predicted_CDS_3|1248_bp
atggggaacgcctctgcccggccgccccgtctgggaggtgaggagcgcctctgcccggcc
gcccttcatctgggagtgctcgcagtgcgcaggcgtggggctctctccttgtcagtcggc
gccgcgtgcgggctggtggctctgtggcagcggcggcggcaggactccggcactatgagc
ggcttcagcaccgaggagcgcgccgcgcccttctccctggagtaccgagtcttcctcaaa
aatgagaaaggacaatatatatctccatttcatgatattccaatttatgcagataaggat
gtgtttcacatggtagttgaagtaccacgctggtctaatgcaaaaatggagattgctaca
aaggaccctttaaaccctattaaacaagatgtgaaaaaaggaaaacttcgctatgttgcg
aatttgttcccgtataaaggatatatctggaactatggtgccatccctcagacttgggaa
gacccagggcacaatgataaacatactggctgttgtggtgacaatgacccaattgatgtg
tgtgaaattggaagcaaggtatgtgcaagaggtgaaataattggcgtgaaagttctaggc
atattggctatgattgacgaaggggaaaccgactggaaagtcattgccattaatgtggat
gatcctgatgcagccaattataatgatatcaatgatgtcaaacggctgaaacctggctac
ttagaagctactgtggactggtttagaaggtataaggttcctgatggaaaaccagaaaat
gagtttgcgtttaatgcagaatttaaagataaggactttgccattgatattattaaaagc
actcatgaccattggaaagcattagtgactaagaaaacgaatggaaaaggaatcagttgc
atgaatacaactttgtctgagagccccttcaagtgtgatcctgatgctgccagagccatt
gtggatgctcctctcggaggaagaaagtggtggagccttgcactggtgattaggtgcttc
tgcccagaagtgacgcacatcacagacatttcactggctagagcaagccgaatgaccatg
cctgacctcaaggtggcagtgcgtattccccacctccactgcatcaagcccaagaaaaag
gctgaaggggatgctaaggaagttaaagccaaggtgaaggacaaaccacggagaagatct
gcaaagttatcactaaaactgctcctccacaccagagccaaagcctaa

>gi568815588r:70154960_70366392|GENSCAN_predicted_peptide_4|490_aa
MGPALKATLSDSQGTSMLWPLLNNSVIADLFDEKFNRTIQAKICLMKSSMEEMKGNDIKE
FEGEPSQPPNSSWPLSQNGTNTEATPATNLTFSSYYQHTSPVAAMFIVAYALIFLLCMVG
NTLVCFIVLKNRHMHTVTNMFILNLAVSDLLVGIFCMPTTLVDNLITGWPFDNATCKMSG
LVQGMSVSASVFTLVAIAVERFRCIVHPFREKLTLRKALVTIAVIWALALLIMCPSAVTL
TVTREEHHFMVDARNRSYPLYSCWEAWPEKGMRRVYTTVLFSHIYLAPLALIVVMYARIA
RKLCQAPGPAPGGEEAADPRASRRRARVVHMLVMVALFFTLSWLPLWALLLLIDYGQLSA
PQLHLVTVYAFPFAHWLAFFNSSANPIIYGYFNENFRRGFQAAFRARLCPRPSGSHKEAY
SERPGGLLHRRVFVVVRPSDSGLPSESGPSSGAPRPGRLPLRNGRVAHHGLPREGPGCSH
LPLTIPAWDI

>gi568815588r:70154960_70366392|GENSCAN_predicted_CDS_4|1473_bp
atggggccagctctcaaggccacgctttctgattcccagggcacatccatgctctggccc
ttattgaataattcagtcattgccgatctgtttgacgaaaagtttaaccgaacaatccaa
gcaaaaatctgtttgatgaaaagttccatggaggagatgaaggggaacgacatcaaagag
tttgagggggagccctcccagcctcccaacagcagttggcccctaagtcagaatgggact
aacactgaggccaccccggctacaaacctcaccttctcctcctactatcagcacacctcc
cctgtggcggccatgttcattgtggcctatgcgctcatcttcctgctctgcatggtgggc
aacaccctggtctgtttcatcgtgctcaagaaccggcacatgcatactgtcaccaacatg
ttcatcctcaacctggctgtcagtgacctgctggtgggcatcttctgcatgcccaccacc
cttgtggacaacctcatcactgggtggcccttcgacaatgccacatgcaagatgagcggc
ttggtgcagggcatgtctgtgtcggcttccgttttcacactggtggccattgctgtggaa
aggttccgctgcatcgtgcaccctttccgcgagaagctgaccctgcggaaggcgctcgtc
accatcgccgtcatctgggccctggcgctgctcatcatgtgtccctcggccgtcacgctg
accgtcacccgtgaggagcaccacttcatggtggacgcccgcaaccgctcctacccgctc
tactcctgctgggaggcctggcccgagaagggcatgcgcagggtctacaccactgtgctc
ttctcgcacatctacctggcgccgctggcgctcatcgtggtcatgtacgcccgcatcgcg
cgcaagctctgccaggccccgggcccggcccccgggggcgaggaggctgcggacccgcga
gcatcgcggcgcagagcgcgcgtggtgcacatgctggtcatggtggcgctgttcttcacg
ctgtcctggctgccgctctgggcgctgctgctgctcatcgactacgggcagctcagcgcg
ccgcagctgcacctggtcaccgtctacgccttccccttcgcgcactggctggccttcttc
aacagcagcgccaaccccatcatctacggctacttcaacgagaacttccgccgcggcttc
caggccgccttccgcgcccgcctctgcccgcgcccgtcggggagccacaaggaggcctac
tccgagcggcccggcgggcttctgcacaggcgggtcttcgtggtggtgcggcccagcgac
tccgggctgccctctgagtcgggccctagcagtggggcccccaggcccggccgcctcccg
ctgcggaatgggcgggtggctcaccacggcttgcccagggaagggcctggctgctcccac
ctgcccctcaccattccagcctgggatatctga

>gi568815588r:70154960_70366392|GENSCAN_predicted_peptide_5|170_aa
MDKDWAVGILGGLWKRLGLTRKYLEVCRGMEMDVDHKLYETRTLAAAALRGSQSARGEGN
RPGPGAWERTPPAHLCPDRPDLRSAEAGAQPATKCPETVPLPAGPKGPAASRHRRPPEPA
TGGIMEEWVSERKNDEYESSSGHCQDLSEKTRELIERRRRDTGGPTMGAL

>gi568815588r:70154960_70366392|GENSCAN_predicted_CDS_5|513_bp
atggacaaggactgggccgtgggcatcttgggtggcctgtggaagagattgggtttaacc
aggaagtacctggaagtctgcaggggaatggaaatggacgttgaccacaagctctatgag
accaggacccttgcggcagcagcgctgcgcgggagccagtcagcccgaggggagggaaac
cggccagggcccggggcctgggagcgcacgccccctgctcacctctgcccggaccgaccg
gacctgcggagcgcggaggcaggggcgcagcccgcaaccaagtgcccggagaccgtccct
ctgcccgctggcccgaaggggcccgctgcctcccgccatcggagaccgccggagcccgca
actgggggcatcatggaggaatgggtttctgagaggaaaaatgatgaatacgaaagttca
tcaggacactgccaagatctctcagaaaaaactcgtgaattgattgagagacgtaggagg
gatactggaggaccaacaatgggggctttatga

>gi568815588r:70154960_70366392|GENSCAN_predicted_peptide_6|198_aa
SETLSQKKRNEEQEKEEEEEEGEEEEGDGEEEEEEESNEEPDLAECKLVSFPIGIYKVLR
NVSGQIHLITLANNELKSLTSKFMTTFSQLRELHLEGNFLHRLPSEVSALQHLKAIDLSR
NQFQDFPEQLTALPALETINLEENEIVDVPVEKLAAMPALRSINLRFNPLNAEVRVIAPP
LIKFDMLMSPEGARAPLP

>gi568815588r:70154960_70366392|GENSCAN_predicted_CDS_6|597_bp
agtgagaccctgtctcaaaagaaaagaaatgaagagcaagagaaggaggaagaagaggag
gagggggaggaggaggagggagatggggaggaggaggaggaggaggaaagcaatgaggaa
ccagacctggccgagtgcaagctggtctcctttcccattggcatctacaaggtcctgcgg
aatgtctctggccagatccacctcatcaccctggctaacaacgagcttaagtccctcacc
agcaagttcatgaccacattcagtcagctccgagagctccacctggaggggaacttccta
caccgcctccccagcgaggtcagtgccctgcagcacctcaaggccattgacctgtcccgg
aaccagttccaggacttccctgagcagcttaccgccctgccggcgctggagaccatcaac
ctggaggagaacgagatcgtagatgtgcccgtggagaagctggccgccatgccagccttg
cgcagcatcaacctccgcttcaacccactcaacgccgaggtgcgcgtgatcgccccgccg
ctcatcaagtttgacatgctcatgtctccggaaggcgcaagagcccccctaccttag