GENSCAN 1.0	Date run: 11-May-117	Time: 11:22:39

Sequence gi568815588r:102730705_102937361 : 206657 bp : 45.67% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   1019   1079   61  2  1   61   88    50 0.450   1.04
 1.02 Intr +   1448   1514   67  1  1  101   43    45 0.586  -0.22
 1.03 Intr +   2155   2204   50  2  2  113   91    33 0.873   4.50
 1.04 Term +   5158   5343  186  0  0  118   43    67 0.810   2.69
 1.05 PlyA +   6451   6456    6                               1.05

 2.00 Prom +   6633   6672   40                              -4.36
 2.01 Init +  13377  13439   63  2  0   86  110   123 0.578  13.46
 2.02 Intr +  32937  33070  134  2  2   50  106    25 0.067  -0.06
 2.03 Intr +  34889  34985   97  2  1   11   97    77 0.133   0.91
 2.04 Intr +  67289  67391  103  1  1   97   78    78 0.061   7.45
 2.05 Intr +  79189  79350  162  2  0   96   51   199 0.548  16.95
 2.06 Term +  81891  82627  737  1  2   97   43   919 0.999  81.93
 2.07 PlyA +  83769  83774    6                               1.05

 3.10 PlyA -  84961  84956    6                               1.05
 3.09 Term -  91683  91672   12  0  0  134   45    -2 0.303  -1.70
 3.08 Intr - 100281 100043  239  1  2  107   91   262 0.671  25.73
 3.07 Intr - 100907 100804  104  1  2   28  105   107 0.869   6.22
 3.06 Intr - 101976 101807  170  0  2   91   69   302 0.994  27.34
 3.05 Intr - 102504 102289  216  0  0   70   69   293 0.999  24.30
 3.04 Intr - 103418 103332   87  2  0   75  100     8 0.645   0.87
 3.03 Intr - 104310 104081  230  1  2  114  100   285 0.996  29.89
 3.02 Intr - 104688 104550  139  0  1   29   70   267 0.996  19.04
 3.01 Init - 106657 106361  297  1  0   98  115   214 0.915  20.32
 3.00 Prom - 106746 106707   40                              -3.56

 4.10 PlyA - 107583 107578    6                               1.05
 4.09 Term - 110531 110275  257  0  2   72   43   114 0.414   1.05
 4.08 Intr - 111750 111312  439  0  1   67   92   184 0.690   9.79
 4.07 Intr - 111906 111823   84  0  0   56   93    82 0.603   5.52
 4.06 Intr - 113092 112951  142  0  1   25   76   114 0.321   4.26
 4.05 Intr - 114719 114442  278  2  2  -31   -6   341 0.141   9.11
 4.04 Intr - 123890 123690  201  2  0   59   85   154 0.230  11.68
 4.03 Intr - 127058 126973   86  0  2   59  127    24 0.429   2.94
 4.02 Intr - 129994 129836  159  2  0   80   32    88 0.272   2.36
 4.01 Init - 130438 130408   31  1  1  114   73   -20 0.363  -1.00
 4.00 Prom - 134068 134029   40                              -5.76

 5.00 Prom + 134184 134223   40                              -5.06
 5.01 Init + 138722 138889  168  1  0   74   79   218 0.564  17.03
 5.02 Intr + 139380 139507  128  2  2   34   75   203 0.992  13.08
 5.03 Intr + 141744 141894  151  0  1   52   94   110 0.996   8.16
 5.04 Intr + 142393 142529  137  0  2   91   25   134 0.986   6.77
 5.05 Intr + 143888 143957   70  2  1  102  100    51 0.967   6.88
 5.06 Intr + 144139 144189   51  0  0   78   63    57 0.651   1.30
 5.07 Intr + 146250 146331   82  2  1   38   61    12 0.784  -7.29
 5.08 Intr + 147675 147806  132  1  0  113  103    28 0.930   7.42
 5.09 Intr + 148145 148287  143  0  2   60   94    70 0.935   4.87
 5.10 Intr + 159840 159974  135  2  0   68   96    84 0.834   7.96
 5.11 Term + 169889 169996  108  1  0   84   35    68 0.427  -0.39
 5.12 PlyA + 170470 170475    6                               1.05

 6.00 Prom + 177364 177403   40                              -5.16
 6.01 Init + 187855 189397 1543  0  1   85   81  3234 0.990 312.98

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  72228  72215   14  0  2   59  115    22 0.807   1.59
S.002 Init +  78165  78234   70  2  1   86   52    39 0.883   1.31


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588r:102730705_102937361|GENSCAN_predicted_peptide_1|121_aa
XELIKGICVKDRNENEIGHSRRAAAIGITQVVISRITMSAPGMILLPVIMERLEKLHFMQ
PHLHGASGVWAFPTEMVSAVHSLLGLIDHAASALPDLPAVQKETGKGQEGQHLSEDKCPS
A

>gi568815588r:102730705_102937361|GENSCAN_predicted_CDS_1|366_bp
nnggagctcataaagggaatctgcgtgaaggacaggaatgaaaatgagattggtcattcc
cggagagctgcggccataggcatcacccaagtagttatttctcggatcaccatgtcagct
cctgggatgatcttgctgccagtcatcatggaaaggcttgagaaattgcacttcatgcag
cctcatcttcatggtgccagtggcgtgtgggcttttcccacagaaatggtatctgctgtt
cattccttacttggtttaattgaccatgctgccagcgcgctccctgatctgcctgctgtc
cagaaggagacagggaaggggcaggaagggcagcacctgtctgaggacaagtgtccatca
gcctaa

>gi568815588r:102730705_102937361|GENSCAN_predicted_peptide_2|431_aa
MALLLLQALPSPLSARAEPPQPETLSPIQGHFTFSDLQYIHLGSRDSNILLPAVFQLIEG
AAKMDGACFVQGIVLGPVRDMEVNVSHLTPKLLTLEEKDKEACVGTNNQSYICDTGHCCG
QSQCCNYYYELWWFWLVWTIIIILSCCCVCHHRRAKHRLQAQQRQHEINLIAYREAHNYS
ALPFYFRFLPNYLLPPYEEVVNRPPTPPPPYSAFQLQQQQLLPPQCGPAGGSPPGIDPTR
GSQGAQSSPLSEPSRSSTRPPSIADPDPSDLPVDRAATKAPGMEPSGSVAGLGELDPGAF
LDKDAECREELLKDDSSEHGAPDSKEKTPGRHRRFTGDSGIEVCVCNRGHHDDDLKEFNT
LIDDALDGPLDFCDSCHVRPPGDEEEGLCQSSEEQAREPGHPHLPRPPACLLLNTINEQD
SPNSQSSSSPS

>gi568815588r:102730705_102937361|GENSCAN_predicted_CDS_2|1296_bp
atggcgctcctgctcctccaggcgctgcccagccccttgtcagccagggctgaacccccg
cagccagaaacccttagtccaatccaaggtcactttacattttcagacctccagtatatt
catctgggaagcagggatagcaatatcctgttaccagctgtattccagctgatagaagga
gcagctaaaatggatggggcctgctttgtgcaaggcatcgtgcttggtcctgtgagggat
atggaagtgaacgtttcacatcttacccctaagttgcttactttagaggagaaggataag
gaagcctgtgtgggtaccaacaatcaaagctacatctgtgacacaggacactgctgtgga
cagtctcagtgctgcaactactactatgaactctggtggttctggctggtgtggaccatc
atcatcatcctgagctgctgctgtgtttgccaccaccgccgagccaagcaccgccttcag
gcccagcagcggcaacatgaaatcaacctgatcgcttaccgagaagcccacaattactca
gcgctgccattttatttcaggtttttgccaaactatttactacctccttatgaggaagtg
gtgaaccgacctccaactcctcccccaccatacagtgccttccagctacagcagcagcag
ctgctgcctccacagtgtggccctgcaggtggcagtcccccgggcatcgatcccaccagg
ggatcccagggggcacagagcagccccttgtctgagcccagcagaagcagcacaagaccc
ccaagcatcgctgaccctgatccctctgacctaccagttgaccgagcagccaccaaagcc
ccagggatggagcccagtggctctgtggctggcctgggggagctggacccgggggccttc
ctggacaaagatgcagaatgtagggaggagctgctgaaagatgacagctctgaacacggc
gcacccgacagcaaagagaagacgcctgggagacatcgccgcttcacaggtgactcgggc
attgaagtgtgtgtgtgcaaccggggccaccatgacgatgacctcaaagagttcaacaca
ctcatcgatgatgctctggatgggcccctggacttctgcgacagctgccatgtgcggccc
cctggtgatgaggaggaaggcctctgtcagtcctctgaggagcaggctcgagagcctggg
cacccgcacctgccacggccgcccgcatgcctgctgctgaacaccatcaacgagcaggac
tctcccaactcccagagcagcagctcccccagctag

>gi568815588r:102730705_102937361|GENSCAN_predicted_peptide_3|497_aa
MWELVALLLLTLAYLFWPKRRCPGAKYPKSLLSLPLVGSLPFLPRHGHMHNNFFKLQKKY
GPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMATLDIASNNRKGIAFADSGAH
WQLHRRLAMATFALFKDGDQKLEKIICQEISTLCDMLATHNGQSIDISFPVFVAVTNVIS
LICFNTSYKNGDPELNVIQNYNEGIIDNLSKDSLVDLVPWLKIFPNKTLEKLKSHVKIRN
DLLNKILENYKEKFRSDSITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIF
GAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREV
LRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERFLNP
AGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQLPSLEGIP
KVVFLIDSFKVKIKSQG

>gi568815588r:102730705_102937361|GENSCAN_predicted_CDS_3|1494_bp
atgtgggagctcgtggctctcttgctgcttaccctagcttatttgttttggcccaagaga
aggtgccctggtgccaagtaccccaagagcctcctgtccctgcccctggtgggcagcctg
ccattcctccccagacacggccatatgcataacaacttcttcaagctgcagaaaaaatat
ggccccatctattcggttcgtatgggcaccaagactacagtgattgtcggccaccaccag
ctggccaaggaggtgcttattaagaagggcaaggacttctctgggcggcctcaaatggca
actctagacatcgcgtccaacaaccgtaagggtatcgccttcgctgactctggcgcacac
tggcagctgcatcgaaggctggcgatggccacctttgccctgttcaaggatggcgatcag
aagctggagaagatcatttgtcaggaaatcagtacattgtgtgatatgctggccacccac
aacggacagtccatagacatctcctttcctgtcttcgtggcggtaaccaatgtcatctcc
ttgatctgcttcaatacctcctacaagaatggggaccctgagttgaatgtcatacagaat
tacaatgaaggcatcatagacaacctgagcaaagacagcctggtggacctagtcccctgg
ttgaagattttccccaacaaaaccctggaaaaattaaagagccatgttaaaatacgaaat
gatctgctgaataaaatacttgaaaattacaaggagaaattccggagtgactctatcacc
aacatgctggacacactgatgcaagccaagatgaactcagataatggcaatgctggccca
gatcaagactcagagctgctttcagataaccacattctcaccaccataggggacatcttt
ggggctggcgtggagaccaccacctctgtggttaaatggaccctggccttcctgctgcac
aatcctcaggtgaagaagaagctctacgaggagattgaccagaatgtgggtttcagccgc
acaccaactatcagtgaccgtaaccgtctcctcctgctggaggccaccatccgagaggtg
cttcgcctcaggcccgtggcccctatgctcatcccccacaaggccaacgttgactccagc
atcggtgagtttgctgtggacaagggcacagaagttatcatcaatctgtgggcgctgcat
cacaatgagaaggagtggcaccagccggatcagttcatgcctgagcgtttcttgaatcca
gcggggacccagctcatctcaccgtcagtaagctatttgcccttcggagcaggacctcgc
tcctgtataggtgagatcctggcccgccaggagctcttcctcatcatggcctggctgctg
cagaggttcgacctggaggtgccagatgatgggcagctgccctccctggaaggcatcccc
aaggtggtctttctgatcgactctttcaaagtgaagatcaagagccagggctga

>gi568815588r:102730705_102937361|GENSCAN_predicted_peptide_4|558_aa
MPSPNHIFLRVSGIFAIEKVILGHPHLYSHSGLHRKVLKHKVHESRPGIMILQQIVAGGG
ILTEYHTLQVTITLFSQFSADGFGGCSQSFATRLHTPECNTRLREEDLLIASTSQPTIPK
MQRDLLPTATKDCDSPDYQAGRVHFQLTSELREPFSTCLDAAIVGYKDLPSIQATIPGKT
FINVKPAEVDVLVGKDWSSFFVNEVTLGGQKCSVIWDLLLQDGELTYLYTKSTDGAPTFN
VTVTMTARMLVLAVEEHCPLFPEKGTLDVELWDRVGAKFRELVPTGNYVPVTVWGDWALA
QLTGSNNYSDTTAQLGFDALTVEQVTKGHNELYPDFLAKLQDAVEKSVSDEHAQGILLRM
LAFENANHECKMAMHSVQQQNLPDREVLPEYIKYEGIGSDTKLFCAHKAILWARAMKDGN
QTGSTDSFLGACYNCGQLGHTRKNCTVKNLKAAKPAQKTQPNAPATVCPCCCKVSPHIDL
PATQNYSCWAYVPFPPLIQPLTWMDAPAEIYTNDSVWMPGATDDRCPTQPGKEGTAFNVP
TVINTLLCASDMHLVVSI

>gi568815588r:102730705_102937361|GENSCAN_predicted_CDS_4|1677_bp
atgcccagccccaaccatatatttctaagagtctcaggcatctttgccatcgagaaagtc
atccttggccacccccacctttactcccactctggcctccacaggaaagtgctgaagcac
aaagtccatgaaagcagaccagggataatgattctgcagcaaatagttgctggagggggc
atactcactgagtaccacactctacaggtgaccataacattattcagtcagttctctgct
gacggatttggaggctgttcccagtcttttgccacgagactgcacaccccagaatgcaac
acgcgcctccgcgaagaagacctactcatagcaagtacttcacagcctacaattcccaag
atgcaacgcgacctccttcccacagcaacgaaagactgcgactccccggactatcaggcc
gggagagtccacttccagctcacctcggagctccgggagcctttcagcacctgcttggat
gcagccatcgtgggctacaaggacttgccttccatccaggccaccatccctgggaaaacc
ttcatcaacgtcaagccagctgaggttgatgtcctggttggcaaagactggtcaagtttt
tttgtgaatgaggtgacacttgggggccagaaatgttctgtgatctgggacctactgctg
caggatggggaactgacctatctttataccaagagcaccgatggagcccccaccttcaat
gtcactgtcaccatgactgctaggatgctagtgttggcagtggaagaacattgtcctttg
tttcctgaaaagggaacattagacgtggaactatgggatcgtgttggtgcaaaattccgg
gaactggtcccaacaggaaattatgttcccgtcactgtttggggtgactgggccttggct
cagctcacaggctccaataattactctgacactactgcccaattaggctttgatgctctc
accgtggaacaagtaacaaagggtcacaatgaattatatcctgattttttagctaaatta
caagatgctgttgaaaaatctgtctctgatgagcacgctcaaggtattcttcttcgaatg
ttagcttttgagaatgcgaaccatgagtgtaaaatggccatgcattccgtccaacaacaa
aatttacctgatcgtgaggtgttgcctgagtatattaaatatgaaggcattggatcagac
acaaagctattctgtgcccacaaagctattctgtgggcacgggccatgaaggacggcaat
caaactggctcgactgattcttttcttggagcctgctataattgtggtcaacttggtcat
actcgaaaaaattgcacagttaaaaacttaaaggcagccaagccggctcaaaaaacacag
ccaaatgctcctgctactgtttgcccttgttgttgtaaagtttcccctcacattgattta
cctgctacacaaaattattcttgctgggcttatgtgccttttcctccacttattcaacct
ctcacctggatggatgctcctgcggaaatctatactaatgatagtgtgtggatgcctgga
gctacagatgaccgttgccccactcaaccaggaaaagaaggcactgcatttaatgttcct
acggttataaataccctcctctgtgcctcggacatgcaccttgttgtatccatctag

>gi568815588r:102730705_102937361|GENSCAN_predicted_peptide_5|434_aa
MGGRSKPASLGGASAQELAAGARRPESQAEETVSARPESQAEETVSARPESQAEETTYYG
QVLKRSADLQTNGCVTTARPVPKHIREALQNVHEEVALRYYGCGLVIPEHLENCWILDLG
SGSGRDCYVLSQLVGEKGHVTGIDMTKGQVEVAEKYLDYHMEKYGFQASNVTFIHGYIEK
LGEAGIKNESHDIVVSNCVINLVPDKQQVLQEAYRVLKVAKGSKSEVTVVTECVKHGGEL
YFSDVYTSLELPEEIRTHKVLWGECLGGALYWKELAVLAQKIGFCPPRLVTANLITIQNK
ELERVIGDCRFVSATFRLFKHSKTGPTKRCQVIYNGGITGHEKELMFDANFTFKEGEIVE
VDEETAAILKNSRFAQDFLIRPIGEKLPTSGGCSALELKDIITDPFKLAEESDSMKSRCV
PDAAGGCCGTKKSC

>gi568815588r:102730705_102937361|GENSCAN_predicted_CDS_5|1305_bp
atgggcgggcggagcaagcctgccagcctgggcggggcctcggcacaggagctggctgcg
ggagcccgccgtcctgagtcgcaggccgaggagacagtgagtgcgcgccctgagtcgcag
gccgaggagacagtgagtgcgcgccctgagtcgcaggccgaggagacaacctactacggg
caggtgctgaagagatcggcagacctccagaccaacggctgtgtcaccacagccaggccg
gtccccaagcacatccgggaagccttgcaaaatgtacacgaagaagtagccctaagatat
tatggctgtggtctggtgatccctgagcatctagaaaactgctggattttggatctgggt
agtggaagtggcagagattgctatgtacttagccagctggttggtgaaaaaggacacgtg
actggaatagacatgaccaaaggccaggtggaagtggctgaaaagtatcttgactatcac
atggaaaaatatggcttccaggcatctaatgtgacttttattcatggctacattgagaag
ttgggagaggctggaatcaagaatgagagccatgatattgttgtatcaaactgtgttatt
aaccttgtgcctgataaacaacaagtgcttcaggaggcatatcgggtgctgaaggttgca
aaaggtagtaaatccgaggtgacagttgtcactgaatgtgttaagcatggtggggagtta
tatttcagtgacgtctatacgagccttgaactgccagaagaaatcaggacacacaaagtt
ttatggggtgagtgtctgggtggtgctttatactggaaggaacttgctgtccttgctcaa
aaaattgggttctgccctccacgtttggtcactgccaatctcattacaattcaaaacaag
gaactggaaagagttatcggtgactgtcgttttgtttctgcaacatttcgcctcttcaaa
cactctaagacaggaccaaccaagagatgccaagttatttacaatggaggaattacagga
catgaaaaagaactaatgtttgatgccaattttacatttaaggaaggtgaaattgttgaa
gtggatgaagaaacagcagctatcttgaagaattcaagatttgctcaagattttctgatc
agaccaattggagagaagttgccaacatctggaggctgttctgctttggagttaaaggat
ataatcacagatccatttaagcttgcagaagagtctgacagtatgaagtccagatgtgtc
cctgatgctgctggaggctgctgtggcacaaagaaaagctgctaa

>gi568815588r:102730705_102937361|GENSCAN_predicted_peptide_6|515_aa
MAARRSLSARGRGILQAAAGRLLPLLLLSCCCGAGGCAAVGENEETVIIGLRLEDTNDVS
FMEGGALRVSERTRVKLRVYGQNINNETWSRIAFTEHERRRHSPGERGLGGPAPPEPDSG
PQRCGIRTSDIIILPHIILNRRTSGIIEIEIKPLRKMEKSKSYYLCTSLSTPALGAGGSG
STGGAVGGKGGSGVAGLPPPPWAETTWIYHDGEDTKMIVGEEKKFLLPFWLQVIFISLLL
CLSGMFSGLNLGLMALDPMELRIVQNCGTEKEKNYAKRIEPVRRQGNYLLCSLLLGNVLV
NTTLTILLDDIAGSGLVAVVVSTIGIVIFGEIVPQAICSRHGLAVGANTIFLTKFFMMMT
FPASYPVSKLLDCVLGQEIGTVYNREKLLEMLRVTDPYNDLVKEELNIIQGALELRTKTV
EDVMTPLRDCFMITGEAILDFNTMSEIMESGYTRIPVFEGERSNIVDLLFVKDLAFVDPD
DCTPLKTITKFYNHPLHFVFNDTKLDAMLEEFKKX

>gi568815588r:102730705_102937361|GENSCAN_predicted_CDS_6|1545_bp
atggcggcgcgccgcagcctcagcgctcgcggccgggggatcctgcaggcggctgcgggg
cggctgctgccgctgctcctgctgagctgctgctgcggtgcgggcggctgcgcagcggtg
ggcgagaatgaggagacggtgatcatcgggctgcgactggaggacacgaacgacgtgtcg
ttcatggaagggggggcgctgcgggtgagcgaacggacccgggtcaagctgcgggtgtac
gggcagaacatcaataacgagacgtggtcccgcatcgccttcaccgagcacgagcggcgg
cgccacagcccgggggagcgcgggctggggggccccgcgccgccagagccggacagcggc
ccccagcgatgcggcatccgcacctcagacatcatcatcttgccccacatcattctcaac
cgccgcacctcgggcatcatcgagatcgagatcaaaccgctacgcaagatggagaagagc
aagtcctattacctgtgcacgtcgctctccacgcccgccctgggcgccggcggctcgggg
tccacgggtggcgccgtcgggggcaagggtggctcgggggtggccgggctcccgccgccc
ccgtgggccgagaccacctggatttaccacgacggcgaggacaccaagatgatcgtaggc
gaagagaagaagttcctgctgcccttctggctgcaggtgatcttcatttcgctgctgctg
tgcctgtcgggcatgttcagcggcctcaacctggggctcatggccctggacccgatggag
ctgcgcatcgtgcagaactgcggcacggagaaggagaagaattacgccaagcgcatcgag
ccggtgcgcaggcagggcaactacctgctgtgctcactgctgctgggcaacgtgctggtc
aacaccacgctcaccatcctgctcgacgacatcgccggctcgggcctcgtggccgtggta
gtctccaccatcggtatcgtcatcttcggagagatcgtgccccaggccatctgctcccgg
catggcctggctgtgggggccaacaccatcttcctcaccaagtttttcatgatgatgacc
ttccccgcttcctacccggtcagcaagctgctggactgcgtcctgggccaggagataggc
accgtctataaccgggaaaaactgctggagatgctccgggtcaccgatccctacaacgac
ctcgttaaggaggagctgaacatcatccaaggggcgctggagctccgcaccaagacggtg
gaggacgtgatgaccccactccgggactgcttcatgatcaccggcgaagccatcctggac
ttcaacaccatgtctgagatcatggagagcggctacacccgcattccagtgtttgaaggg
gagcgctccaatatcgtggacctgctgtttgtcaaagacttggccttcgtggatcccgat
gactgtacccccctgaaaaccatcaccaaattttataaccaccccttgcactttgttttc
aatgacaccaagttggacgctatgctggaagaatttaagaaagnn