GENSCAN 1.0	Date run:  7-Nov-116	Time: 21:36:05

Sequence gi568815588f:79412650_79613111 : 200462 bp : 46.23% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -   3475   3470    6                               1.05
 1.03 Term -  12590  12510   81  2  0   84   52    77 0.666   1.39
 1.02 Intr -  20109  19909  201  0  0  108  110   389 0.999  42.58
 1.01 Init -  32791  32546  246  1  0   64   90   511 0.780  46.50
 1.00 Prom -  35092  35053   40                              -5.96

 2.00 Prom +  38578  38617   40                              -5.36
 2.01 Init +  47763  47829   67  2  1   50   74    91 0.581   5.15
 2.02 Term +  55542  55699  158  1  2  109   44    78 0.588   3.60
 2.03 PlyA +  56429  56434    6                               1.05

 3.04 PlyA -  57369  57364    6                               1.05
 3.03 Term -  57602  57547   56  0  2  109   54    37 0.009   0.12
 3.02 Intr -  75549  75460   90  1  0  107   78    -2 0.175   0.67
 3.01 Init -  78828  78768   61  0  1   73   89    26 0.252   0.66
 3.00 Prom -  80037  79998   40                              -1.56

 4.00 Prom +  88002  88041   40                              -6.56
 4.01 Sngl +  93799  94182  384  0  0   63   48   624 0.680  52.09
 4.02 PlyA +  94185  94190    6                             -10.57

 5.06 PlyA -  94197  94192    6                             -10.46
 5.05 Term -  94701  94219  483  0  0   74   37   866 0.925  74.85
 5.04 Intr -  94911  94765  147  0  0   76 -108   231 0.585   2.73
 5.03 Intr -  95136  94939  198  0  0  111 -108   338 0.712  16.05
 5.02 Intr -  95573  95481   93  2  0  100   56    21 0.534   0.26
 5.01 Init -  95761  95756    6  1  0   64   77     8 0.145  -2.25
 5.00 Prom -  96951  96912   40                              -6.16

 6.00 Prom +  98262  98301   40                              -8.76
 6.01 Sngl + 100001 100465  465  1  0   53   36   623 0.955  49.75
 6.02 PlyA + 101080 101085    6                               1.05

 7.04 PlyA - 111754 111749    6                               1.05
 7.03 Term - 112400 112305   96  2  0   43   43    80 0.105  -3.03
 7.02 Intr - 113983 113864  120  1  0  130  113    85 0.977  15.89
 7.01 Init - 118695 118660   36  0  0   56  101    40 0.729   0.11
 7.00 Prom - 119271 119232   40                              -9.26

 8.00 Prom + 119380 119419   40                              -7.66
 8.01 Sngl + 122986 123771  786  0  0   86   47   221 0.962  13.76
 8.02 PlyA + 124585 124590    6                               1.05

 9.05 PlyA - 125938 125933    6                               1.05
 9.04 Term - 144936 144560  377  1  2   85   54   465 0.902  37.70
 9.03 Intr - 145480 145403   78  2  0  101   94    76 0.984   9.02
 9.02 Intr - 146356 146237  120  2  0  114   99    50 0.755   9.17
 9.01 Init - 146834 146663  172  2  1   71   84   180 0.908  13.55
 9.00 Prom - 166112 166073   40                              -5.46

10.05 PlyA - 167166 167161    6                               1.05
10.04 Term - 170010 169730  281  1  2    8   48   272 0.071  10.81
10.03 Intr - 171727 171611  117  2  0   86  110    11 0.121   3.54
10.02 Intr - 183008 182727  282  0  0   82   43   300 0.086  22.29
10.01 Init - 183086 183071   16  2  1   47   94    15 0.301  -1.56
10.00 Prom - 187818 187779   40                              -7.16

11.00 Prom + 188231 188270   40                              -3.56
11.01 Init + 199177 199348  172  0  1   71   84   122 0.362   8.91
11.02 Intr + 199663 199782  120  2  0  114   99    95 0.856  13.67

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 183008 182683  326  0  2   82   48   332 0.807  23.53


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588f:79412650_79613111|GENSCAN_predicted_peptide_1|175_aa
MSLLSAIDTSAASVYQPAQLLNWVYLSLQDTHQASAFDAFRPEPTAGAAPPELAFGKGRP
EQLGSPLHSSYLNSFFQLQRGEALSNSVYKGASPYGSLNNIADGLSSLTEHFSDLTLTSE
ARKPSKRPPPNYLCHLCFNKGHYIKDCPQGRLVSRFGLCTLMGQDSEGLSSNVLL

>gi568815588f:79412650_79613111|GENSCAN_predicted_CDS_1|528_bp
atgagcctgctgtcggccatcgacacgagcgccgcctcggtgtaccagcccgcccagctg
ctcaactgggtctacctgtcgctgcaggacacgcaccaggctagcgccttcgatgccttc
cggcccgagccgaccgccggcgccgcacccccggagctggccttcggcaagggccgcccc
gagcagctgggctcgcccctgcactccagctatctcaacagcttcttccagctgcagcgc
ggagaggcgctgagcaacagtgtgtacaagggcgcctcaccctatggctccctcaacaac
atcgccgatggcctcagctccctcaccgagcacttctcagacctgaccctcacctccgag
gctcgcaagcccagcaagcggcccccacccaactacctgtgccacctgtgcttcaacaaa
ggacactacatcaaggactgcccccagggtcgcctggtatctcgttttggcctctgcacg
ctgatgggtcaggactctgaaggcctgagcagcaatgtgttgctgtga

>gi568815588f:79412650_79613111|GENSCAN_predicted_peptide_2|74_aa
MSFLSLHQKQMLALCFTYSLQNSLSLHCTLAAAPDLHTLEKEGLGFFHFQPSESEGRTLP
NPACPEVKEAPEEG

>gi568815588f:79412650_79613111|GENSCAN_predicted_CDS_2|225_bp
atgagcttcctgagtctccaccagaagcagatgctggccctatgcttcacgtacagcctg
cagaactctctctccctgcactgcacactggcagcagctccagacctgcacaccctggag
aaggaaggattgggattcttccacttccaacccagtgaatctgagggaagaactctgcct
aatccagcttgtcctgaggtcaaagaagccccagaggaagggtga

>gi568815588f:79412650_79613111|GENSCAN_predicted_peptide_3|68_aa
MGRLYLGQGVNHSLPACSWADIWPYQMGDLLSPFPPIQLDGWHLLLGCYLCTAHPAATVA
RDVAMLTD

>gi568815588f:79412650_79613111|GENSCAN_predicted_CDS_3|207_bp
atgggccgcttgtatctggggcagggggtgaatcactcactccctgcatgctcctgggca
gatatttggccgtatcagatgggggatctcctctcccccttcccccccatccagttagat
ggctggcatttgctccttggttgttatctttgtactgcccacccagcagccactgtggca
agagatgtggctatgctgactgactga

>gi568815588f:79412650_79613111|GENSCAN_predicted_peptide_4|127_aa
MDEVPEDRNMQKMDKVREDKELQEVDEVPEDQQLQEVDEIPEDLLVQEMDEVREDHQLQE
VDEVPEDLQLQKVDKAPEDQQLQEVDEVPEDLQLQEVDEVPENLPLQEVDEVPEDQQMQE
VDEVPED

>gi568815588f:79412650_79613111|GENSCAN_predicted_CDS_4|384_bp
atggatgaggtcccggaggacagaaacatgcagaagatggataaggtccgggaggacaag
gagctgcaggaggtggatgaggtcccagaggaccaacagctgcaggaggtggatgagatc
ccagaggacctactggtgcaggagatggatgaggtccgagaggaccaccagctgcaggag
gtggatgaggtcccagaagacctacagttgcagaaggtggataaggccccagaggaccaa
cagcttcaggaggtggatgaggtcccagaagacctacagttgcaggaggtggatgaggtc
ccagagaacctaccactgcaggaagtggatgaggtcccagaggaccaacagatgcaggag
gtggatgaggtcccagaggactga

>gi568815588f:79412650_79613111|GENSCAN_predicted_peptide_5|308_aa
MMDSVEGRLYGIHAAILKPGGGKGARDYHPRHKGLIQLLQLSVLSDLIHLQLSVLSDLIN
LQLSVLWDLIHLLQLAVLPDLIYLQLSVLRDLIHLLQLSLSVLWDLIHLLQLAVLPDLIY
LPLSVLQDLIHLLQLSVLQDLIHLLQLSLSVLPDLIYLQLSVLRDLIHLLQLAVLPDLIY
LQLSVLRDLIHLLQLSVLRDLIHLQLSVLWDLIHLLQLSVLRDLIHLQLSVLWDLIHLLQ
LAVLPDLIYLQLSVLQDLIHLLQLSVLRDLIDLQLSVLWDLIHLLQLSVLPDIIHLQLSV
LQDLIHLL

>gi568815588f:79412650_79613111|GENSCAN_predicted_CDS_5|927_bp
atgatggactcagttgaagggagactttatggcattcatgctgccattttgaaacctgga
ggagggaaaggtgcaagggactatcacccgaggcataagggcctcatccagctcctgcag
ctgtcagtcctctcagacctcatccacctgcagctgtcagtcctctcagacctcatcaac
ctgcagctgtcagtcctctgggacctcatccacctcctgcaactggcagtcctcccggat
ctcatctacctgcagctgtcagtcctccgggacctcatccacctcctgcagctgtcactg
tcagtcctctgggacctcatccacctcctgcagctggcagttctcccggacctcatctac
ctgccgctgtcagtcctccaggacctcatccacctcctgcagctgtcagtcctccaggac
ctcatccacctcctgcagctgtcactatcagtcctcccggacctcatctacctgcagctg
tcagtcctccgggacctcatccacctcctgcaactggcagtcctcccggacctcatctac
ctgcagctgtcagtcctccgggacctcatccacctcctacagctgtcagtcctccgggac
ctcatccacctgcagctgtcagtcctctgggacctcatccacctcctgcagctgtcagtc
ctccgggacctcatccacctgcagctgtcagtcctctgggacctcatccacctcctgcag
ctggcagtcctcccggacctcatctacctgcagctgtcagtcctccaggacctcatccac
ctcctgcagctgtcagtcctccgggacctcatcgacctgcagctgtcagtcctctgggac
ctcatccacctcctgcagctgtcagtcctcccggacatcatccacctgcagctgtcagtt
ctccaggacctcatccacctcctgtag

>gi568815588f:79412650_79613111|GENSCAN_predicted_peptide_6|154_aa
MADDLDFETGDAGASATFPMQCSALRKNGFVVLKGWPCKIVEMSASKTGKHGHAKVHLVG
IDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGIQDGYLSLLQDSGEVPEDLRLPEGDLG
KEIEQKYDCGEEILITVLSAMTEEAAVAIKAMAK

>gi568815588f:79412650_79613111|GENSCAN_predicted_CDS_6|465_bp
atggcagatgatttggacttcgagacaggagatgcaggggcctcagccaccttcccaatg
cagtgctcagcattacgtaagaatggctttgtggtgctcaaaggctggccatgtaagatc
gtggagatgtctgcttcgaagactggcaagcacggccacgccaaggtccatctggttggt
attgacatctttactgggaagaaatatgaagatatctgcccgtcaactcataatatggat
gtccccaacatcaaaaggaatgacttccagctgattggcatccaggatgggtacctatca
ctgctccaggacagcggggaggtaccagaggaccttcgtctccctgagggagaccttggc
aaggagattgagcagaagtacgactgtggagaagagatcctgatcacggtgctgtctgcc
atgacagaggaggcagctgttgcaatcaaggccatggcaaaataa

>gi568815588f:79412650_79613111|GENSCAN_predicted_peptide_7|83_aa
MPWPPKVLGLQAVVKVFIVLTPQFLSRDKDQLTKELQKHVKSVTVSCKSPRKMEFVPELR
KTVTGKIKQGELEKRSLVRCNQQ

>gi568815588f:79412650_79613111|GENSCAN_predicted_CDS_7|252_bp
atgccttggcctcccaaagtgctgggattacaggcggtcgtgaaggtgtttattgtcctg
accccacagtttctgtcccgtgacaaggaccagctgaccaaggagctgcagaagcatgta
aagtcagtgacagtctcatgcaagtccccaaggaagatggagtttgtcccggagctgcgg
aaaactgtcactggaaagattaaacaaggtgaacttgagaaaaggagcttggtcagatgt
aatcagcagtga

>gi568815588f:79412650_79613111|GENSCAN_predicted_peptide_8|261_aa
MAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRAHIAKSILSQKNKAGGIMLPD
FKLYYKATVTKTAWYWYRNRDIDQWNRTEPSEIMPRIYNYLIFDKPEKNKQWGKDSLFNK
WCWENWLAICRKLKLDPFLTPYTKIISRWIKDLNVRPKTIKTLEENLGITIQDIDMGKDF
MSKTPKAMATKAKIDKWDLIKLKSFCAAKQTTIRVNRQPTKWEKIFATYSSDKGLISRIY
NELKQIYKKKQTTPSKSGRRT

>gi568815588f:79412650_79613111|GENSCAN_predicted_CDS_8|786_bp
atggccatactgcccaaggtaatttatagattcaatgccatccccatcaagctaccaatg
actttcttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaagagcc
cacatcgccaagtcaatcctaagccaaaagaacaaagctggaggcatcatgctacctgac
ttcaaactatactacaaggctacagtaaccaaaacagcgtggtactggtaccgaaacaga
gatatagatcaatggaacagaacagagccctcagaaataatgccacgtatctacaactat
ttgatctttgacaaacctgagaaaaacaagcaatggggaaaggattccctatttaataaa
tggtgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttccttaca
ccttatacaaaaattatttcaagatggattaaagacttaaacgttagacctaaaaccata
aaaaccctagaagaaaacttaggcattaccattcaggacatagacatgggcaaggacttc
atgtctaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatctaatt
aaactaaagagcttctgcgcagcaaaacaaactaccatcagagtgaacaggcaacctaca
aaatgggagaaaattttcgcaacctactcatctgacaaagggctaatatccagaatctac
aatgaactcaaacaaatttacaagaaaaaacaaacaaccccatcaaaaagtgggcgaagg
acatga

>gi568815588f:79412650_79613111|GENSCAN_predicted_peptide_9|248_aa
MWLCPLALTLILMAASGAACEVKDVCVGSPGIPGTPGSHGLPGRDGRDGVKGDPGPPGPM
GPPGETPCPPGNNGLPGAPGVPGERGEKGEAGERGPPGLPAHLDEELQATLHDFRHQILQ
TRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGGRIAVPRNPEENEAIASFVKK
YNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAGRGKEQCVEMYTDGQWNDRNCLY
SRLTICEF

>gi568815588f:79412650_79613111|GENSCAN_predicted_CDS_9|747_bp
atgtggctgtgccctctggccctcaccctcatcttgatggcagcctctggtgctgcgtgc
gaagtgaaggacgtttgtgttggaagccctggtatccccggcactcctggatcccacggc
ctgccaggcagggacgggagagatggtgtcaaaggagaccctggccctccaggccccatg
ggtccgcctggagaaacaccatgtcctcctgggaataatgggctgcctggagcccctggt
gtccctggagagcgtggagagaagggggaggctggcgagagaggccctccagggcttcca
gctcatctagatgaggagctccaagccacactccacgacttcagacatcaaatcctgcag
acaaggggagccctcagtctgcagggctccataatgacagtaggagagaaggtcttctcc
agcaatgggcagtccatcacttttgatgccattcaggaggcatgtgccagagcaggcggc
cgcattgctgtcccaaggaatccagaggaaaatgaggccattgcaagcttcgtgaagaag
tacaacacatatgcctatgtaggcctgactgagggtcccagccctggagacttccgctac
tcagatgggacccctgtaaactacaccaactggtaccgaggggagcctgcaggtcgggga
aaagagcagtgtgtggagatgtacacagatgggcagtggaatgacaggaactgcctgtac
tcccgactgaccatctgtgagttctga

>gi568815588f:79412650_79613111|GENSCAN_predicted_peptide_10|231_aa
MADSPALSLQGSIPAVGEKVFFTNRQLVYLDAISEACARAGSCIAVPRSPEENEAIARFL
KKYNMYAYMALAKGPSPGDFCYLDEAPVDYTNRCPGELIDQGLRGLQGPPGKLGPPGNPG
APGIPGPRSQKGDHGDNSAFSLGKMSGKKLFMTNGERMPFSKVKALCAGLQATVAAPKNA
KENKAIQDVAKDTAFLGITDEATEGQFIYLTGGRLTYSNWKKDEPNDHGSG

>gi568815588f:79412650_79613111|GENSCAN_predicted_CDS_10|696_bp
atggcagacagcccagccctcagtcttcagggctccataccggcagtgggagagaaggtc
ttcttcacaaacaggcagttggtctatttagatgccattagtgaggcatgtgccagagca
ggcagctgcattgctgtccctaggagtccagaggaaaacgaggccattgcaagatttttg
aagaagtacaacatgtatgcctacatggccctggccaagggtcccagccctggagacttc
tgctacctagatgaggcccctgtggactacacgaaccggtgcccaggggagctcatagat
caagggctcagaggtttgcagggccctcctgggaagttggggcccccaggaaacccaggg
gctcctggaattccaggaccaaggagccaaaaaggagatcatggggacaattcagccttc
tccttggggaaaatgtctgggaagaagcttttcatgaccaacggtgagcggatgcctttc
tccaaagtgaaggctctgtgtgctgggctccaggccacagtggctgcccccaagaatgcc
aaggagaataaggccatccaggatgtggccaaagacactgccttcctgggcatcacagat
gaggcaactgaaggccagttcatatacttgacgggtgggaggctgacctacagcaactgg
aagaaggatgagccaaatgaccacggctcagggtag

>gi568815588f:79412650_79613111|GENSCAN_predicted_peptide_11|98_aa
MWLCPLALNLILMAASGAVCEVKDVCVGSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPM
GPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPX

>gi568815588f:79412650_79613111|GENSCAN_predicted_CDS_11|294_bp
atgtggctgtgccctctggccctcaacctcatcttgatggcagcctctggtgctgtgtgc
gaagtgaaggacgtttgtgttggaagccctggtatccccggcactcctggatcccacggc
ctgccaggcagggacgggagagatggtctcaaaggagaccctggccctccaggccccatg
ggtccacctggagaaatgccatgtcctcctggaaatgatgggctgcctggagcccctggt
atccctggagagtgtggagagaagggggagcctggcgagaggggccctccagnn