GENSCAN 1.0	Date run:  4-Nov-116	Time: 13:53:39

Sequence gi568815588f:47606203_47806755 : 200553 bp : 40.56% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -    222    217    6                               1.05
 1.03 Term -  10475  10255  221  0  2   23   42   173 0.351   2.42
 1.02 Intr -  16074  15919  156  1  0   79   30    95 0.536   1.86
 1.01 Init -  18766  18664  103  1  1   35   90    62 0.486   1.55
 1.00 Prom -  28871  28832   40                              -3.25

 2.00 Prom +  32085  32124   40                              -5.65
 2.01 Init +  56153  56193   41  1  2   85   67    47 0.500   2.01
 2.02 Intr +  60220  60352  133  1  1   53   34   106 0.101   1.43
 2.03 Intr +  63044  63119   76  1  1   25   81   100 0.077   1.17
 2.04 Intr +  66345  66479  135  1  0   62   24   110 0.698   1.62
 2.05 Term +  67083  67429  347  1  2   14   38   251 0.583   6.37
 2.06 PlyA +  70265  70270    6                               1.05

 3.00 Prom +  81595  81634   40                              -6.05
 3.01 Sngl +  84318  84809  492  2  0  101   37   371 0.955  29.10
 3.02 PlyA +  84870  84875    6                               1.05

 4.00 Prom +  90833  90872   40                              -6.15
 4.01 Init + 100001 100144  144  1  0  104  -10   180 0.997   9.97
 4.02 Intr + 100217 100547  331  1  1   72  -11   286 0.062  11.38
 4.03 Intr + 104380 104514  135  2  0   82   94    66 0.019   6.22
 4.04 Intr + 109449 109655  207  1  0   95  110    17 0.050   2.73
 4.05 Intr + 113631 113859  229  1  1  103   82    24 0.204  -0.69
 4.06 Intr + 120639 120754  116  0  2   72   58    89 0.216   3.47
 4.07 Term + 124035 124234  200  1  2   79   54   194 0.576  11.68
 4.08 PlyA + 124296 124301    6                               1.05

 5.20 PlyA - 124779 124774    6                               1.05
 5.19 Term - 137851 137719  133  0  1  121   54    79 0.188   4.38
 5.18 Intr - 146020 145946   75  0  0   64  100   100 0.042   6.51
 5.17 Intr - 147691 147605   87  0  0   72   59    94 0.032   3.07
 5.16 Intr - 148057 147837  221  1  2   17   86   266 0.017  15.48
 5.15 Intr - 150020 149773  248  0  2   99   70   256 0.537  21.16
 5.14 Intr - 151126 151006  121  1  1   61   70   160 0.977  10.65
 5.13 Intr - 151889 151719  171  2  0  129   64   119 0.985  12.82
 5.12 Intr - 153725 153379  347  0  2   90   56   490 0.546  40.19
 5.11 Intr - 154814 154585  230  1  2  106   97   217 0.998  20.99
 5.10 Intr - 155443 155239  205  2  1   76   94   201 0.996  16.84
 5.09 Intr - 156567 156432  136  0  1   76  102    51 0.655   4.52
 5.08 Intr - 157240 156693  548  2  2   19   24   301 0.297   8.47
 5.07 Intr - 158023 157771  253  1  1   82   71    92 0.611   2.98
 5.06 Intr - 159460 159215  246  1  0   19   75   238 0.954  12.33
 5.05 Intr - 160797 160410  388  2  1   55   50   171 0.214   3.87
 5.04 Intr - 168572 168433  140  2  2   45  103   108 0.190   6.34
 5.03 Intr - 169553 169409  145  1  1  116   89    -7 0.193   1.56
 5.02 Intr - 170452 170293  160  2  1   42   59   111 0.633   1.72
 5.01 Init - 171533 171389  145  2  1   63   57    81 0.532   2.83

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  80628  80592   37  0  1   55   86    45 0.879   1.22
S.002 Init +  89283  89340   58  2  1   64   75    69 0.864   4.72
S.003 Term + 100217 100600  384  1  0   72   49   310 0.937  19.40


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588f:47606203_47806755|GENSCAN_predicted_peptide_1|159_aa
MLAFMQASKGLIRIFVISITKNAEVLTPQGVRLQGQGAWIICEHVYKEDKAGSTMGSLAC
TMHTIVYVNAASQNHVVYNLPFGNGMALHPSCNGTIHDETVLGKFDRCPQEFQDEAKHGQ
LLPASCFQNSEGYMLIEAAFDGKMEKEKRCQILLPTLDE

>gi568815588f:47606203_47806755|GENSCAN_predicted_CDS_1|480_bp
atgttggcttttatgcaagcaagcaagggcctaattcgaatttttgttatctcaatcact
aaaaatgctgaggtattgacacctcaaggggtccgattacaaggtcagggagcatggatc
atctgtgagcatgtctacaaggaggacaaagcgggtagtactatggggtctcttgcatgt
accatgcacactatagtctatgtgaatgctgcttcccagaatcatgtagtgtacaatctt
ccctttggcaatgggatggcattgcacccatcctgcaatggaaccatacatgatgagaca
gttttgggaaagtttgataggtgtcctcaagagtttcaagatgaagctaaacatggccag
ttgttgcctgcttcttgctttcaaaattctgaaggctacatgctcattgaggcagctttt
gatggcaagatggagaaagagaaaagatgccagattcttcttcccactttagatgagtga

>gi568815588f:47606203_47806755|GENSCAN_predicted_peptide_2|243_aa
MGQIPHGIVLSSQYFTTVLREECCGYYTHLTDQGAEAQKPKDFCCQCHAFGWSYDVVQCS
LHTCFYRRYLLPVPEPFEDSVDEAGAILTNKKNKIPALVEETVKKWDKYISDGNEDNGRR
VEQDEGMKGQPPLEGRIAEKNPAEALQAFSSGMLQAGEELEITLTPHSGSPCFQPPRTGD
RAEEVSETALIHFRPSQNVRKLPSRSLAGEEEQGCTRAPELQKARCATGEQGESSKPNSD
RGA

>gi568815588f:47606203_47806755|GENSCAN_predicted_CDS_2|732_bp
atggggcagatccctcatggcatagtgttgtcctcgcagtactttacaacagtcctaaga
gaggaatgctgtggttattacacccacttgacagaccagggagcagaagcacagaaaccc
aaggatttctgctgtcaatgtcatgcatttggctggagttatgatgtcgtgcaatgctcc
cttcacacctgtttctacaggcgctatctgttaccagttcctgagccttttgaagattcc
gtggacgaagctggggctatactgacaaataagaaaaataaaattcctgcccttgtggag
gagacagttaaaaaatgggacaaatacatttcagatggaaatgaggacaatggaagaaga
gtagagcaggatgaaggcatgaaggggcaaccacccttagaaggcaggattgctgagaaa
aatccagcagaggctctccaggctttcagttctggaatgctgcaggcaggggaagagcta
gaaataactctcaccccacactctggcagtccatgttttcagccaccaaggactggggac
agggcagaagaggtgagtgaaactgctctaattcatttcaggccttcacagaatgtaagg
aagctgccctccagaagcctggctggggaggaggagcagggctgcacgagggcacctgag
cttcagaaagcaaggtgtgcgactggagagcaaggagaatctagcaaaccaaactctgac
cgtggcgcttaa

>gi568815588f:47606203_47806755|GENSCAN_predicted_peptide_3|163_aa
METEPKASYGEIRIPEENSIQLDGFTEAYESGQNQAYSLELFSPVCPKTENSRIHINSDK
GLEEHTGSQELFSSEDELPPNEIRIELCSSGILCSQLNTFHKSAIKRSCTSEDKVAQSEA
LSRVLQVAKKMKLISNGGDSAVEMDRRNVSEFKSIKKIINKKL

>gi568815588f:47606203_47806755|GENSCAN_predicted_CDS_3|492_bp
atggagactgaaccaaaggcaagttacggggagataagaatacctgaagagaattcgatt
cagcttgatggttttacagaagcatatgaaagtggacaaaaccaagcatattcccttgaa
ctttttagtcctgtttgtcctaaaacagaaaatagccgcattcacataaactctgataaa
ggtcttgaagaacatacaggatctcaagaacttttcagttctgaagatgaactgccacca
aatgagatacgtattgagttgtgtagctcaggaatactgtgttcccaactaaataccttc
cacaaaagtgctattaaaagaagctgtacctctgaagataaagtggcccagtctgaagct
ctatctagagtccttcaagtagctaagaaaatgaagttgatttctaatggaggagattct
gctgtagaaatggatcggagaaatgtgtctgaatttaagagtattaaaaaaatcattaat
aaaaaactgtga

>gi568815588f:47606203_47806755|GENSCAN_predicted_peptide_4|453_aa
MPQSKSRKIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKLITTYSIDINGYILV
YSVTSIKSFEVIKVIHGKLLDMVGKVQIPIMLVGNKKDLHMERVISYEEGKALAESWNAA
FLESSAKENQTAVDVFRRMILEAEKMDGGSFTRQVFMLEAVYSYRGQKQKKVMLTVEQAQ
DQHYALVLWGPGAAWYPQLQRKKGYIWEFKYLFVQRNYTLENLELHTTPWSSCECLFDDD
IRAITFKAKFQKSAPSFVKISDLATHLEDKCSGVVLIKAQISELAFPLTAAQKISLNAHS
SLKSIFSSLPNIIYTGCAKCGLELETDENRIYKQCFSCLPFTMKKIYYRPALMTAVDGRH
NVYIHVESKLIEKILLNISADCLNRVIVPSSEITYGMVVADLFHSLLAVSAEPCVLKIQS
LFVLDENSYPLQQDFSLLDFYPDMVKHGANARL

>gi568815588f:47606203_47806755|GENSCAN_predicted_CDS_4|1362_bp
atgccgcagtcaaagtcccggaagatcgcgatcctgggctaccggtctgtggggaaatcc
tcattgacgattcaatttgttgaaggccaatttgtggactcctacgatccaaccatagaa
aacacttttacaaagttgatcacaacatactccatagatattaatggctatattcttgtg
tattctgttacatcaatcaaaagttttgaagtgattaaagttatccatggcaaattgttg
gatatggtggggaaagtacaaatacctattatgttggttggaaataagaaagacctgcat
atggaaagggtgatcagttatgaagaagggaaagctttggcagaatcttggaatgcagct
tttttggaatcttctgctaaagaaaatcagactgctgttgatgtttttcgaaggatgatt
ttggaggcagaaaaaatggacgggggcagcttcacaaggcaagtcttcatgctcgaggca
gtatacagttatagaggacagaagcagaaaaaagttatgttaacagtggaacaggcccaa
gatcaacattatgcgcttgtattatggggtcctggagcagcctggtaccctcaacttcaa
aggaaaaaaggttatatttgggaatttaaatatctttttgttcagcgcaattacacacta
gaaaacctagaattgcatacaacgccttggtcatcctgtgagtgcttgtttgatgatgat
ataagggcaattacatttaaagcaaaatttcaaaaaagtgcaccctcctttgtgaagata
tcagacttagcaacccacctagaggataagtgttcaggagtggttctaattaaagcccag
atttcagagctggcatttcctcttacagcagctcagaagatatctctaaatgctcacagt
tctctgaagagtattttttcttctcttcccaacatcatatatactggctgtgcaaaatgt
ggattggaactagaaacagatgagaacaggatctacaaacaatgttttagctgcttgcca
tttactatgaagaaaatatattataggccagcgttaatgactgccgttgatggaagacat
aatgtttacatccatgtagaatcaaagctgatagagaagattcttctcaacatttctgca
gactgcctcaacagagtgatagttccttcctcagagatcacctatgggatggttgtggca
gacctgttccactccttgttggcagtcagcgcagaaccttgtgtattgaagattcagagc
ctttttgtgttagatgaaaacagctatccattacaacaagatttctccctcctggatttt
tatcctgacatggtaaagcatggagccaatgcccgtctctga

>gi568815588f:47606203_47806755|GENSCAN_predicted_peptide_5|1332_aa
MEGSGQRGDHQGPKMSIPGNTPGERRCHPRTLLHSLGTFTISAHQDLVEIVQDKCVPHLD
PMINTLSGNLEKETHSIPQGNVAMKPPSYMKPDTGAAQRRTKAAGMAGTTTDVSCMPTQN
YCIRQYSSDFKRQKPNSNWLKHQRDFSLFLIRQLYHIPPKPYSLPLQQKTAQNSGSQPVA
AFRFRTPGGCAVLSELWHLQVFKLLDFLQPSLEVLLPWKYNFRLAMKDRTHVCCCFQASQ
LHRHGEEQGLKTGSRARAAARPWMPFCSGELAPGQPGLRAPGQWMEGRLPKVPVALCLIH
GQRHRRGSPGSLPYSCSLVKKERGSQRWTEEEQLSGLGDTEKDGDFGKAQHGGREMAALG
LALRKCQKGFPFQKTSHYPTPPPEQPEYSSGAIMEAAGVDAMPHWGGQRPGVSRSGGGFS
RHPRLSPSRAEISPVKRTAEDSYWVKWPGSPPSHAPTAQTLEGEWLRPLHPGPEGSQTRP
SGAPQFTTLLALGQPPLREPLTDINPIEKTEPSIRTLSCPKSQGWRVRSLNWNPGASGTR
SRIALSTGLSAESERVRERRIPAQGHQAGSAGARDPRGDSTPGSGKAPPSRGRSCGWRGL
GLRRIWEGGGSVLATRCEGSGAEPCVRRGGEGCSPALRDGGGTLTAPCPKPQGAPGAPGA
RDPPWLEPCGFRELTLGTSSTTDRPCARPTAPRGALRDGLAAQPQPPRPARPACGSSPMA
EQLALVIGGTIGGLLLLLLIGASCCLWRRFCATLTYEELPGTPAMATTAASSGQRDRPCQ
PHARTQLSSPWCSTVLAERSETTPFTCHLHVVSLTLDRPPAVPFVVPPTLQGRDWVPLHS
GEWADAPWDPCPASELLPHTSSGGLGDACMVGAINPELYKFPEDKSETDFPDGCLGRLWF
SVEYEQEAERLLVGLIKAQHLQAPSETCSPLVKLYLLPDERRFLQSKTKRKTSNPQFDEH
FIFQVQLLEQAGSGALRVAGKVSSKTITQRVLKFSVYHVDRQRKHQLLGQVLFPLKNETL
VGDCRRVIWRDLEAESLEPPSEFGDLQFCLSYNDYLSRLTVVVLRAKGLRLQEDRGIVSV
FVKVSLMNHNKFVKCKKTSAVLGSINPVYNETFSFKADATELDTASLSLTVVQNMEGDSK
ATPYPGLLGWGPRGAAECSGRRAGALGRDAQQAQGAGEALACALPHHGALTLRPAPRFRF
GSRPSSQLHVTATATRMDVSSNSSPSCQPARARRTPDLDQNLRCSEERSCLVMTQLYLLN
GPAGAGYYSGTVSVSSDIRIDASHPHIPRPSFRPPYPPHVSPYRPSFCVNYLFISIAAVP
SGKSSAWMLLAF

>gi568815588f:47606203_47806755|GENSCAN_predicted_CDS_5|3999_bp
atggaaggcagtggacaaagaggggaccaccaaggtccaaagatgtctatcccagggaat
actcctggagagaggcgctgtcatccaaggactctgctccactccctgggaaccttcaca
atttctgcccaccaggatttggtggagattgttcaggataagtgtgtaccccacttagat
ccaatgataaatactttatctgggaatctggagaaagaaactcactctattccccaaggg
aatgtggcgatgaagccaccatcttacatgaagccggatactggagccgcccagagaagg
acaaaggctgcgggcatggcaggtaccaccactgatgtgtcttgtatgcctacacagaat
tattgtattaggcaatactcttctgacttcaagaggcagaaacccaactcaaattggctt
aagcaccaaagggacttttcactgtttcttataaggcagttataccatataccaccaaaa
ccctactcactcccactgcaacagaagacagcgcagaactcaggttctcaaccagttgct
gcattcaggttcagaacccctggaggatgtgctgtcctctccgaactgtggcatttgcag
gtctttaaactcttggacttcctgcagccctccttggaagtgcttttgccatggaaatac
aacttccgcttggccatgaaagacagaacccatgtctgctgctgtttccaggcttcccag
ctccacagacacggggaagaacaaggtctgaaaacaggaagcagagccagagctgctgcc
agaccctggatgcctttctgttctggggagctggctccaggccagccaggtctcagagcc
cccgggcagtggatggaggggaggctgcccaaagtgcctgtggctctttgcctgattcac
ggtcagcgccacaggagagggtctcctgggtccttgccctacagctgctcactggtgaag
aaggaacgagggagccagagatggacagaggaggaacagctgtcaggacttggtgacaca
gagaaagatggggactttggaaaagcacagcatgggggtcgagagatggcagctctgggc
ctggcactcaggaagtgccagaagggattcccttttcaaaaaacatcccactacccaact
ccacccccagaacagcctgagtacagctcgggcgcaatcatggaggcagctggtgtggat
gccatgccccactggggtggtcagcgacctggggtaagcagaagtgggggaggattctcc
agacaccccagactgtctccaagtagagcggagatctcgccagttaagcgcacagctgag
gacagttactgggtgaagtggcctgggtctccgccttctcatgcccccaccgcccagacc
ctagaaggggagtggctgcggcctctgcaccctggccctgagggctcccagacccggccc
agtggggcaccccagttcaccaccctcctcgccttaggccagccgcccttacgagagccc
ctcacggacattaacccaattgagaagactgaacccagcatacgaacgttaagttgtccc
aaatcgcagggctggcgagtgaggagcctgaattggaacccaggagcttctggaacccgc
tccagaattgcgctctcgaccggtttgtccgctgagagcgaacgggtgcgcgagcgccgc
atccctgcccaaggccatcaggcaggcagcgctggggcccgggacccgcgcggagactcc
accccgggatccgggaaggctcccccgagccggggtcggagctgcggctggaggggcctc
ggcttgaggaggatctgggagggcgggggctcagtcctggccaccaggtgtgaggggtcg
ggtgcggagccctgtgtcagacgcggcggtgaaggctgtagccctgctctccgggatggg
ggtggtactctcaccgcaccctgccccaagccgcagggagcccctggcgcccctggcgcc
cgggacccgccctggctggagccctgcggtttccgggagctcacgctgggcaccagcagc
accacggaccgcccctgtgctcgcccgacggcgccccgcggcgctttaagagacggcctg
gcagcccagccccagccgcccagaccggcgagaccagcctgcgggagcagccccatggcg
gagcagctggccctggtgattgggggcaccatcggggggctgctgctgctgctgttgatc
ggggcaagctgctgtctgtggagaaggttctgtgccaccctcacctatgaggagctgcct
gggacaccagccatggccaccacagctgcctccagtgggcagcgggacaggccctgccag
ccgcatgctaggacccaactgagcagcccctggtgctcaaccgtcctggctgagcgctct
gagaccacaccattcacttgccacctacatgttgtctccctgactctggacaggccacca
gctgtgccattcgtggtgcccccaacccttcaaggccgagattgggtgcccctgcacagt
ggagagtgggccgatgccccatgggacccctgcccggcatcagagctgctgcctcacacc
tccagcggcggccttggagatgcatgtatggtgggggccatcaacccagagctgtacaag
ttcccagaggacaaaagtgagaccgacttccccgacggctgcctggggcggctgtggttc
tcggtggaatatgagcaggaggctgagcggctgctggtgggcttgatcaaggcacagcac
ctgcaagccccctcggagacctgcagccccctggtgaagctctacctgctgcccgatgag
cggcgcttcctccaatccaagaccaaacgcaaaacctccaacccgcagtttgacgagcac
ttcatctttcaggtacagcttctggagcaggcagggtctggtgccctccgcgttgctggg
aaggtgtccagcaagaccatcacccagagggtgctgaagttctccgtctaccacgtggac
aggcagaggaagcaccagctcctgggccaggtgctcttccccttgaagaatgagacccta
gtgggggactgccggcgtgtcatctggagagacctggaggctgagagcctggagcccccc
tcggagtttggcgacctccagttctgcctcagctacaacgactacctgagccgcctgacg
gtggttgtgctgcgtgccaagggcctccggctccaggaggacagaggcattgtcagtgtg
tttgtcaaagtgtctctgatgaaccacaacaagtttgtcaagtgcaagaagacttcagct
gtgctgggctccatcaaccctgtgtacaatgagaccttcagcttcaaggccgatgccacc
gagctggataccgctagcctcagcctgactgtggtgcagaacatggaaggggacagtaag
gccacaccctaccctgggctgctgggatggggaccacgaggggctgccgagtgttcaggc
agaagagctggagcactgggacgagatgctcagcaagcccaaggagctggtgaagcgctg
gcatgcgctctgccgcaccacggagccctgacccttcgcccagcaccgcggttccgcttt
gggagccgaccatcctcgcagttgcatgtgacagccacagccacacgcatggacgtttca
tccaacagctccccgagctgccagccagcccgagccaggaggacccctgatttggaccag
aatctcagatgctcagaagaaagatcctgtttagtgatgacccagctctacctgctgaat
ggacctgcaggagcaggctactacagtggaactgtttctgtttcatctgacatccggata
gatgccagccacccccacattccaagaccttccttccgccctccctaccccccgcacgtc
tctccctaccgtccttctttctgtgtgaattatctgttcatctccattgctgcagtaccg
tctggcaaatcatctgcttggatgctcctggctttttga