GENSCAN 1.0	Date run:  4-Aug-121	Time: 20:41:23

Sequence gi568815588f:13487087_13730337 : 243251 bp : 43.48% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.12 Intr -   5790   5525  266  1  2   72   95   123 0.573   8.63
 1.11 Intr -   9802   9680  123  2  0   79   87    83 0.953   7.86
 1.10 Intr -  12994  12692  303  2  0   50   56   121 0.011   1.66
 1.09 Intr -  13580  13424  157  2  1   34   53   119 0.010   2.58
 1.08 Intr -  24825  24725  101  1  2   61   33    67 0.001  -1.67
 1.07 Intr -  39135  39052   84  1  0   68   82    56 0.028   2.79
 1.06 Intr -  41472  41397   76  0  1   78   93    38 0.005   2.39
 1.05 Intr -  42360  42346   15  0  0  108  106    21 0.057   1.64
 1.04 Intr -  49803  49710   94  2  1   63   70    77 0.067   3.37
 1.03 Intr -  73837  73648  190  2  1   98   50    47 0.006   0.54
 1.02 Intr -  75433  75292  142  1  1   46   75    62 0.201   0.63
 1.01 Init -  85707  85627   81  0  0   68   86    95 0.915   8.27
 1.00 Prom -  90183  90144   40                              -3.66

 2.00 Prom +  92599  92638   40                              -5.96
 2.01 Init + 100001 100066   66  1  0   97   65   132 0.284  12.87
 2.02 Intr + 110372 110449   78  1  0   67   86    46 0.094   2.05
 2.03 Intr + 113158 113262  105  0  0   42  107    74 0.875   5.11
 2.04 Intr + 118545 118658  114  2  0   59  116    50 0.974   5.54
 2.05 Intr + 122953 123099  147  0  0   97   74   200 0.999  19.93
 2.06 Intr + 124529 124597   69  1  0   83  100    97 0.998   9.78
 2.07 Intr + 126655 126795  141  0  0   40   72   129 0.992   7.05
 2.08 Intr + 126929 127000   72  1  0   68   83    55 0.854   2.60
 2.09 Intr + 129312 129467  156  2  0  103  115    11 0.951   5.51
 2.10 Term + 143174 143254   81  1  0  109   50    67 0.064   2.69
 2.11 PlyA + 149017 149022    6                               1.05

 3.16 PlyA - 149991 149986    6                               1.05
 3.15 Term - 152005 151893  113  2  2   56   38    85 0.238  -0.98
 3.14 Intr - 159075 158959  117  1  0  102   46    91 0.026   6.74
 3.13 Intr - 170436 169550  887  2  2   86   94  1620 0.844 153.37
 3.12 Intr - 172404 172237  168  2  0   78  105   168 0.984  16.56
 3.11 Intr - 173369 173230  140  2  2   72   99   182 0.649  16.96
 3.10 Intr - 179239 178865  375  1  0  123   63   385 0.726  34.71
 3.09 Intr - 183442 183320  123  1  0   56   92   157 0.978  13.68
 3.08 Intr - 187958 187825  134  0  2   80   61   180 0.990  14.86
 3.07 Intr - 190466 190347  120  0  0    1  100   129 0.005   5.87
 3.06 Intr - 206953 206812  142  1  1  120   96   225 0.921  26.43
 3.05 Intr - 207129 206995  135  0  0   98  105    13 0.963   4.76
 3.04 Intr - 208888 208745  144  1  0   31  102    79 0.291   4.08
 3.03 Intr - 214392 214254  139  2  1  111  113    72 0.851  12.47
 3.02 Intr - 220027 219951   77  1  2   98  115    70 0.823   9.01
 3.01 Intr - 220349 220200  150  2  0   78   13    93 0.341   1.16

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  63787  63812   26  2  2  164   39    37 0.846   4.79
S.002 Init - 190476 190347  130  0  1   25  100   129 0.993   8.11
S.003 Init + 195251 195311   61  1  1   32   86    72 0.933   2.81


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588f:13487087_13730337|GENSCAN_predicted_peptide_1|544_aa
MPADLVSGESLFLIDDSFVLCPHMAKGVAISHPELMETRLGRVTYPRSHSYEQNTQNFKP
GLSMILSTKLILPQDQNVKHVGSQKLPIRDQGMNWKQGVWNQPRNNIESQDACHSIHQSK
RNLETVQVGSTQEVSLAKIWSSIVPVQCGSSGATLAELQLHAQATVFLQRERKWPPPPPS
PHHGVLREEKKQEIPELQTDYHHEVYKIPEFSNDVNGEAKETQPIFLASSLSSLVEECST
GTQKPDASNADLSPHSLCISWRQRVILEDIVSAVKPCIPASHPEGHCVSSEALRPCQSRL
SSLSLPRLVKLTDRDESMEIKKQITGMRRLLNDSTGRIYQRVGKEGEKLKEEPQDLDLVW
PPRLNSSAEAPQSLHPSSRGVWNELPPQSGQFSGQYGTRSRTFQSQPHPTTSSNGELPVV
NSSAGSNCCTCNCQSTLQAILQELKTMRKLMQIQAVGTQNRQQPPISLICSQRTAVSRKR
NKKKKVPPKTVEPLTVKQKPSGSEMEKKSVVASELSALQAAEHTSPEESRVLGFGIVLES
PSSD

>gi568815588f:13487087_13730337|GENSCAN_predicted_CDS_1|1632_bp
atgccagcagatttggtgtctggtgagagcctgttcctcatagatgacagcttcgtgctg
tgtcctcacatggcaaaaggggtagcaatatcacacccggagctgatggagacacggctt
ggtcgagtaacttacccacgatcacacagctatgagcagaacacccagaacttcaaacca
ggtctgtccatgattttatcaactaagttaatactgcctcaagaccaaaatgtgaagcat
gttggatcccagaagctccccatcagggaccagggaatgaactggaaacagggagtctgg
aaccaacccagaaacaacattgagtcccaggatgcatgtcacagtatccaccagagcaag
agaaacttggaaacagttcaagttggatccacccaggaggtctctcttgctaagatctgg
tcctccattgttcctgttcagtgtgggagctcaggggccaccttggcagagctccagctg
catgctcaggccacagtgttcttacagagagagcgcaaatggcccccgccgccgccttcc
ccgcaccatggagttctccgagaggaaaagaagcaggaaatcccagagcttcaaactgat
tatcaccacgaggtgtataagatcccagaattcagcaacgatgttaatggggaggccaaa
gagacacagcccatttttttagctagttccttgagcagcttagtagaggagtgtagcaca
gggacccagaagcctgatgcatccaatgcagatctctcacctcacagtctctgcatctcc
tggcggcagcgtgtcatcctggaggacattgtgtcagcagtgaagccctgcatccctgcc
agtcatcctgaaggacattgtgtcagtagtgaagccctgcgtccctgccagtccaggctt
tcttccttgtccttgccccgcctggtgaagctgacagacagagatgaaagcatggaaata
aaaaagcaaattacagggatgagaagattgctgaacgacagcactgggcggatctatcag
cgagttggcaaagaaggagagaaactaaaagaagagccccaggacctggatttagtctgg
cctccacgtttgaactcctctgctgaggccccgcaaagcctccacccgtcttcacgtggt
gtgtggaatgagctaccgccccagagtggacagttctcagggcagtatggcacccgttct
agaaccttccaaagccagccccaccctaccacgagctccaatggagaacttccagtggtg
aattcatcagctggatcaaactgctgtacttgtaactgccagtcaacgttgcaggccatt
ctacaagaactcaagaccatgaggaaattaatgcaaattcaagcagttggaactcaaaac
agacaacaacctccaatttcccttatatgctcccagcgaactgctgtctcacgaaagaga
aataaaaagaaaaaagtgcccccaaagactgtggaacctcttactgtgaaacagaagccc
agtgggtcagagatggagaaaaagtcggtggtggcctctgagctatctgctctccaggca
gccgagcacacctccccggaggagagccgcgttctaggattcggcattgttctggaatca
ccttcctcagat

>gi568815588f:13487087_13730337|GENSCAN_predicted_peptide_2|342_aa
MDILKSEILRKRQLVEDRNLLVENKKYFKRSELAKKEEEAYFERCGYKIQPKEEDQKPLT
SSNPVLELELAEEKLPMTLSRQEVIRRLRERGEPIRLFGETDYDAFQRLRKIEILTPEVN
KGLRNDLKAALDKIDQQYLNEIVGGQEPGEEDTQNDLKVHEENTTIEELEALGESLGKGD
DHKDMDIITKFLKFLLGVWAKELNAREDYVKRSVQGKLNSATQKQTESYLRPLFRKLRKR
NLPADIKESITDIIKFMLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSK
HVAHVLNDETQRKYIQGLKRLMTICQKHFPTDPSKCVEYNAL

>gi568815588f:13487087_13730337|GENSCAN_predicted_CDS_2|1029_bp
atggacattctgaaatcagagatccttcggaagcggcagctggtggaggacaggaacctg
ctggtggaaaataaaaaatatttcaagcgtagtgagctcgccaaaaaagaagaggaagca
tattttgaaagatgtggctacaagatacagccaaaagaggaggaccagaaaccattaact
tcatcgaatccagtgttagaacttgaactggcagaggaaaaattacctatgacgctttct
aggcaagaggtcatcagaagattgagagaaagaggagaaccaatcagactatttggagag
actgattatgatgcttttcaacgtttaaggaaaatagagatcctcacaccagaagttaac
aagggattgaggaatgatttgaaagcagccttggataagattgatcagcagtacctcaat
gaaatcgtcggcggtcaggagcctggagaggaagacacacagaatgatctgaaagttcat
gaggaaaacaccacaattgaagagttagaggcgcttggagagtccttagggaaaggcgat
gatcataaagacatggacatcatcaccaaattcctgaagtttcttcttggcgtttgggct
aaagaattgaatgccagagaagattatgtgaaacgcagtgtgcagggtaaactgaacagt
gcgacccagaaacagaccgagtcctacctaagaccactttttagaaagctacggaaaagg
aatcttcctgctgatattaaagaatcaataacggatattattaaattcatgttgcagaga
gaatacgtgaaggcaaatgatgcttatcttcagatggccattggaaatgcgccttggccc
atcggtgtcactatggttggtatccatgccagaactggcagagaaaagattttttccaag
catgttgcacatgttttaaatgacgaaactcagcggaaatatattcagggattgaagagg
ttaatgaccatttgccagaaacactttcctacagacccatccaaatgtgtggagtacaat
gcactgtga

>gi568815588f:13487087_13730337|GENSCAN_predicted_peptide_3|987_aa
GKVCQAGDCHDQTNKGRPKAENLKRTCFVPVKEPAGKSTPTLPGFELESCIFQWRQLENL
YFREKKFSVEVHDPRRASVTRRTFGHSGIAVHTWYACPALIKSIWAMAISQHQFYLDRKQ
SKPADFHRVNMRSEVAVLASVDSNVEGRGRAELQAFRQPWLDSKGPQARKRVSVINDEAK
GCKQKCCTLVREISPFAECQDGEQARARDDCPFRKSKIHAARSLSEIAIDLTETGTLKTS
KLANMGSKGKIISGSSGSLLSSVPENHEVTDEAFLCPVAFGDLQLKYVKIQETATKIIQS
SEGSQESDSSQSAKKDMLAALKSRQEALEETLRQRLEELKKLCLREAELTGKLPVEYPLD
PGEEPPIVRRRIGTAFKLDEQKILPKGEEAELERLEREFAIQSQITEAARRLASDPNVSK
KLKKQRKTSYLNALKKLQEIENAINENRIKSGKKPTQRASLIIDGQCQPGCPHPTPTPGP
RQPDARSHEWSLHDLSSCLTVRCLHLSIHKMKRSLEGLRQMHYHRNDYDKSPIKPKMWSE
SSLDEPYEKVKKRSSHSHSSSHKRFPSTGSCAEAGGGSNSLQNSPIRGLPHWNSQSSMPS
TPDLRVRSPHYVHSTRSVDISPTRLHSLALHFRHRSSSLESQGKLLGSENDTGSPDFYTP
RTRSSNGSDPMDDCSSCTSHSSSEHYYPAQMNANYSTLAEDSPSKARQRQRQRQRAAGAL
GSASSGSMPNLAARGGAGGAGGAGGGVYLHSQSQPSSQYRIKEYPLYIEGGATPVVVRSL
ESDQEGHYSVKAQFKTSNSYTAGGLFKESWRGGGGDEGDTGRLTPSRSQILRTPSLGREG
AHDKGAGRAAVSDELRQWYQRSTASHKEHSRLSHTSSTSSDSGSQYSTSSQSTFVAHSRV
TRMPQMCKATSESLKNCPNATVKARKSWLALLTHSRHPSGHKERPVGVVEGGCGKVRFYS
SRNEQRPQHHGTLATSHLMILKVKKFE

>gi568815588f:13487087_13730337|GENSCAN_predicted_CDS_3|2964_bp
ggaaaagtctgccaagctggggactgccacgaccaaaccaacaaaggccgaccgaaggcg
gagaacttgaaaagaacttgttttgttccagttaaggaacctgcaggaaaatccacaccc
acattgcctggttttgaactggagagctgcatattccaatggagacagttggaaaacctg
tacttcagagaaaagaagttttccgtggaagttcatgacccacgcagggcttcagtgaca
aggaggacgtttgggcacagcggcattgcagtgcacacgtggtatgcatgtccggcattg
atcaagtccatctgggctatggccataagccaacaccagttctatctggacagaaagcag
agtaagcccgcagacttccatcgtgttaacatgaggtcggaagtcgctgtccttgccagt
gtggacagcaacgtcgagggcagaggaagggcagagctgcaggcattcagacagccctgg
ctggacagtaagggcccccaggcacggaagagagtttcggtgattaatgatgaggccaag
ggatgcaaacaaaaatgctgcacattagtcagggagataagtccctttgcggaatgtcaa
gacggtgagcaggcgcgggcgagggatgactgtcctttccgcaagtccaaaatccatgca
gcacgcagcctgagtgagatcgccatcgacctgaccgagacggggacgctgaagacctcg
aagctggccaacatgggtagcaaggggaagatcatcagcggcagcagcggcagcctgctg
tcttcagtacctgagaaccatgaggtcacggatgaagctttcttgtgtccagttgcattt
ggagacctgcaactgaagtatgtcaaaatccaggaaacagctacgaaaataattcaaagc
tcggaaggttctcaggaatcagatagctcgcagtcggccaagaaggacatgctggctgcc
ttgaagtccaggcaggaagctctggaggaaaccctgcgtcagaggctggaggaactgaag
aagctgtgtctccgagaagctgagctcacgggcaagctgccagtagaatatcccctggat
ccaggggaggaaccacccattgttcggagaagaataggaacagccttcaaactggatgaa
cagaaaatcctgcccaaaggagaggaagctgagctggaacgcctggaacgagagtttgcc
attcagtcccagattacggaggccgcccgccgcctagccagtgaccccaacgtcagcaaa
aaactgaagaaacaaaggaaaacctcgtatctgaatgcactgaagaaactgcaggagatt
gaaaatgcaatcaatgagaaccgcatcaagtctgggaagaaacccacccagagggcttcg
ctgatcatagacggtcagtgccaaccgggctgcccccaccccactcccacgcccgggccc
cggcaaccagacgccaggtcccacgagtggtccctgcacgacctgagcagctgcctaact
gtccgctgccttcatttgtccatccataaaatgaagcgatccctggagggactccgacag
atgcactatcaccgcaacgactatgacaagtcacccatcaagcccaaaatgtggagtgag
tcctctttagatgaaccctatgagaaggtcaagaagcgctcctctcacagccattccagc
agccacaagcgcttccccagcacaggaagctgtgcggaagccggcggaggaagcaactcc
ttgcagaacagccccatccgcggcctcccgcactggaactcccagtccagcatgccgtcc
acgccagacctgcgggtccggagtccccactacgtccattccacgaggtcggtggacatc
agccccacccgactgcacagcctcgcactgcactttaggcaccggagctccagcctggag
tcccagggcaagctcctgggctcggaaaacgacaccgggagccccgacttctacaccccg
cggactcgtagcagcaacggctcagaccccatggacgactgctcgtcgtgcaccagccac
tcgagctcggagcactactacccggcgcagatgaacgccaactactccacgctggccgag
gactcgccgtccaaggcgcgccagaggcagaggcagcggcagcgggcggcgggcgcactg
ggctcagccagctcgggcagcatgcccaacctggcggcgcgcgggggtgcggggggcgcg
gggggcgcggggggcggtgtgtacctgcacagccagagccagcccagctcgcagtaccgc
atcaaggagtacccgctgtacatcgagggcggcgccacgcccgtggtggtgcgcagcctg
gagagcgaccaggagggccactacagcgtcaaggctcagttcaagacgtccaactcctac
acggcgggcggcctgttcaaggagagctggcgcggcggcggcggcgacgagggcgacacg
ggccgcctgacgccgtcgcgatcgcagatcctgcggactccgtcgctgggccgcgagggc
gcccacgacaagggcgcgggccgtgccgccgtctcagacgagctgcgccagtggtaccag
cgttccaccgcctcgcacaaggagcacagccgcctgtcgcacaccagctccacctcctcg
gacagcggctcgcagtacagcacctcctcccagagcaccttcgtggcgcacagcagggtc
accaggatgccccagatgtgcaaggccacgtcagagagcctgaaaaactgccccaatgcc
acggtaaaggcgaggaagtcttggctggcgttgctgactcacagtcgccatccatctgga
cacaaagagagacctgtgggagtcgtagagggaggatgtggcaaagtccgattttattcc
agtcgaaatgaacaaagacctcagcaccatggcacacttgccacaagtcacttgatgatt
ttgaaggtcaagaagtttgagtaa