GENSCAN 1.0 Date run: 24-Jul-118 Time: 16:40:41 Sequence gi568815588f:133757824_133861122 : 39599 bp : 46.16% C+G : Isochore 2 (43 - 51 C+G%) Parameter matrix: HumanIso.smat Predicted genes/exons: Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr.. ----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------ 1.01 Sngl + 2034 3302 1269 2 0 101 48 646 0.949 55.81 1.02 PlyA + 7890 7895 6 1.05 2.00 Prom + 12687 12726 40 -8.06 2.01 Init + 13023 13098 76 2 1 43 100 54 0.782 2.93 2.02 Intr + 16104 16136 33 1 0 55 92 52 0.505 0.49 2.03 Term + 20671 20906 236 2 2 -69 35 303 0.783 5.78 2.04 PlyA + 23858 23863 6 1.05 Suboptimal exons with probability > 0.800 Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr.. ----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------ Predicted peptide sequence(s): Predicted coding sequence(s): >gi568815588f:133757824_133861122|GENSCAN_predicted_peptide_1|422_aa MALPTPSDSTLPAEARGRGRRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPE PRVQIWFQNERSRQLRQHRRESRPWPGRRGPPEGRRKRTAVTGSQTALLLRAFEKDRFPG IAAREELARETGLPESRIQIWFQNRRARHPGQGGRAPAQAGGLCSAAPGGGHPAPSWVAF AHTGAWGTGLPAPHVPCAPGALPQGAFVSQAARAAPALQPSQAAPAEGISQPAPARGDFA YAAPAPPDGALSHPQAPRWPPHPGKSREDRDPQRDGLPGPCAVAQPGPAQAGPQGQGVLA PPTSQGSPWWGWGRGPQVAGAAWEPQAGAAPPPQPAPPDASARQGQMQGIPAPSQALQEP APWSALPCGLLLDELLASPEFLQQAQPLLETEAPGELEASEEAASLEAPLSEEEYRALLE EL >gi568815588f:133757824_133861122|GENSCAN_predicted_CDS_1|1269_bp atggccctcccgacaccttcggacagcaccctccccgcggaagcccggggacgaggacgg cgacggagactcgtttggaccccgagccaaagcgaggccctgcgagcctgctttgagcgg aacccgtacccgggcatcgccaccagagaacggctggcccaggccatcggcattccggag cccagggtccagatttggtttcagaatgagaggtcacgccagctgaggcagcaccggcgg gaatctcggccctggcccgggagacgcggcccgccagaaggccggcgaaagcggaccgcc gtcaccggatcccagaccgccctgctcctccgagcctttgagaaggatcgctttccaggc atcgccgcccgggaggagctggccagagagacgggcctcccggagtccaggattcagatc tggtttcagaatcgaagggccaggcacccgggacagggtggcagggcgcccgcgcaggca ggcggcctgtgcagcgcggcccccggcgggggtcaccctgctccctcgtgggtcgccttc gcccacaccggcgcgtggggaacggggcttcccgcaccccacgtgccctgcgcgcctggg gctctcccacagggggctttcgtgagccaggcagcgagggccgcccccgcgctgcagccc agccaggccgcgccggcagaggggatctcccaacctgccccggcgcgcggggatttcgcc tacgccgccccggctcctccggacggggcgctctcccaccctcaggctcctcggtggcct ccgcacccgggcaaaagccgggaggaccgggacccgcagcgcgacggcctgccgggcccc tgcgcggtggcacagcctgggcccgctcaagcggggccgcagggccaaggggtgcttgcg ccacccacgtcccaggggagtccgtggtggggctggggccggggtccccaggtcgccggg gcggcgtgggaaccccaagccggggcagctccacctccccagcccgcgcccccggacgcc tccgcgcggcaggggcagatgcaaggcatcccggcgccctcccaggcgctccaggagccg gcgccctggtctgcactcccctgcggcctgctgctggatgagctcctggcgagcccggag tttctgcagcaggcgcaacctctcctagaaacggaggccccgggggagctggaggcctcg gaagaggccgcctcgctggaagcacccctcagcgaggaagaataccgggctctgctggag gagctttag >gi568815588f:133757824_133861122|GENSCAN_predicted_peptide_2|114_aa MSTVKTRVSLSLRLTWETWLQAIEEVRNLVPTICDLFGRKKIEENNTLVFTVDVKANKHQ IRQAVKKLYDSDVAKVTTLICPDKENKAYVRLAPDYDAFDVVTKLGSSKLSPAG >gi568815588f:133757824_133861122|GENSCAN_predicted_CDS_2|345_bp atgtccacagtgaagaccagagtttcgttgtccttaagactgacctgggagacgtggctg caggccattgaggaagtaagaaacctggttcccaccatctgcgacttattcggccggaag aagatagaagaaaacaacacgcttgtgttcactgtggatgttaaagccaacaagcaccag atcagacaggctgtgaagaagctctatgacagtgatgtggccaaggtcaccaccctgatt tgtcctgataaagagaacaaggcatatgttcgacttgctcctgattatgatgctttcgat gttgtaacaaaattgggatcatctaaactgagtccagctggctaa