GENSCAN 1.0	Date run:  8-Nov-116	Time: 09:34:58

Sequence gi568815587r:5249805_5354728 : 104924 bp : 38.50% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -     84     79    6                               1.05
 1.03 Term -   3601   3473  129  1  0   83   49   153 0.988   8.10
 1.02 Intr -   4710   4488  223  2  1  105  113   224 0.996  23.81
 1.01 Init -   4924   4833   92  1  2   96  102   131 0.999  15.31
 1.00 Prom -   5014   4975   40                              -6.05

 2.00 Prom +  13098  13137   40                              -3.15
 2.01 Init +  13643  13719   77  1  2   95   37   120 0.960   8.21
 2.02 Term +  14038  14665  628  1  1   14   41   195 0.802   0.24
 2.03 PlyA +  15008  15013    6                               1.05

 3.04 PlyA -  16364  16359    6                               1.05
 3.03 Term -  18793  18665  129  1  0   96   44   116 0.861   5.20
 3.02 Intr -  19872  19650  223  2  1   56  113   170 0.810  13.51
 3.01 Init -  20086  19995   92  1  2  100  115   100 0.991  13.91
 3.00 Prom -  25492  25453   40                              -6.35

 4.05 PlyA -  26051  26046    6                               1.05
 4.04 Term -  31944  31843  102  0  0   32   47   120 0.893  -0.40
 4.03 Intr -  33386  33208  179  0  2   68   98   160 0.970  13.72
 4.02 Intr -  34612  34472  141  2  0   14   33   172 0.607   3.70
 4.01 Init -  36190  35986  205  1  1   67   11   121 0.541   1.36
 4.00 Prom -  38578  38539   40                              -8.15

 5.00 Prom +  41052  41091   40                              -6.85
 5.01 Init +  42591  42597    7  2  1   73   60     1 0.407  -3.02
 5.02 Intr +  43629  43793  165  1  0   57   53   151 0.651   7.51
 5.03 Term +  44526  45157  632  1  2   40   37   299 0.673  13.49
 5.04 PlyA +  45749  45754    6                               1.05

 6.02 PlyA -  46613  46608    6                               1.05
 6.01 Sngl -  52142  51210  933  2  0   67   52   445 0.995  35.00
 6.00 Prom -  54947  54908   40                              -4.85

 7.00 Prom +  63855  63894   40                              -3.95
 7.01 Init +  65587  65763  177  0  0   48   65   170 0.033  10.01
 7.02 Intr +  74248  74506  259  0  1   87   60   146 0.121   7.81
 7.03 Term +  81309  81553  245  1  2  -13   44   200 0.090   0.58
 7.04 PlyA +  81980  81985    6                               1.05

 8.02 PlyA -  83072  83067    6                               1.05
 8.01 Sngl -  93534  92782  753  0  0   74   39   357 0.931  23.30
 8.00 Prom -  93737  93698   40                              -1.55

 9.00 Prom +  98389  98428   40                              -7.25
 9.01 Sngl + 101704 102642  939  0  0   73   44   314 0.790  21.75
 9.02 PlyA + 104069 104074    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl +  65587  65853  267  0  0   48   48   268 0.877  13.79


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587r:5249805_5354728|GENSCAN_predicted_peptide_1|147_aa
MGHFTEEDKATITSLWGKVNVEDAGGETLGRLLVVYPWTQRFFDSFGNLSSASAIMGNPK
VKAHGKKVLTSLGDAIKHLDDLKGTFAQLSELHCDKLHVDPENFKLLGNVLVTVLAIHFG
KEFTPEVQASWQKMVTGVASALSSRYH

>gi568815587r:5249805_5354728|GENSCAN_predicted_CDS_1|444_bp
atgggtcatttcacagaggaggacaaggctactatcacaagcctgtggggcaaggtgaat
gtggaagatgctggaggagaaaccctgggaaggctcctggttgtctacccatggacccag
aggttctttgacagctttggcaacctgtcctctgcctctgccatcatgggcaaccccaaa
gtcaaggcacatggcaagaaggtgctgacttccttgggagatgccataaagcacctggat
gatctcaagggcacctttgcccagctgagtgaactgcactgtgacaagctgcatgtggat
cctgagaacttcaagctcctgggaaatgtgctggtgaccgttttggcaatccatttcggc
aaagaattcacccctgaggtgcaggcttcctggcagaagatggtgactggagtggccagt
gccctgtcctccagataccactga

>gi568815587r:5249805_5354728|GENSCAN_predicted_peptide_2|234_aa
MVLKGKFTALNVDVKESERGQTDNIRKPKGDVRIPGKIQGSSLSQEELDTLNRPVISSKT
EMIIKIYQQQKSPGPDRFTAEFYQTFKEELIPILLTVFYKIEKERILPKSFYEASITLIP
KLGKNITKKKKHYRSISLMNIDANILDKILANSIRQHIKTHDQVGFMRGMHGWFNIRKSI
SVIHNIKRIGNKNHVIISIATETAFNKIQHHFMTKTQQNRFTKDIPQCNKSQLW

>gi568815587r:5249805_5354728|GENSCAN_predicted_CDS_2|705_bp
atggtgctaaaaggaaagttcacagccctaaatgtcgatgtcaaagagtctgaaagagga
cagacagacaatataagaaaacctaaaggagacgttcgaattcctggaaagatacagggc
tctagcttaagtcaggaagaattagataccctgaacagaccagtaataagcagcaagact
gaaatgataataaaaatttaccaacaacaaaaaagtccaggaccagatagattcacagct
gaattctaccagacattcaaagaagaattgataccaatcctattgacagtattctacaag
atagagaaagagagaatcctccctaaatcattctatgaagccagtatcaccttaatacca
aaactgggaaagaacataaccaaaaaaaaaaaacactacagatcaatatccctgatgaac
atagatgccaacatccttgacaaaatactagctaatagcatccgacagcatatcaaaacc
catgatcaagtgggtttcatgcgagggatgcacggatggtttaacatacgcaagtcaata
agtgtgatacacaacataaagagaattggaaacaaaaatcatgtgattatctcaatagcc
acagaaactgcattcaacaaaattcaacatcactttatgactaaaactcagcaaaatcgg
tttacaaaggacatacctcaatgtaataaaagccagctatggtaa

>gi568815587r:5249805_5354728|GENSCAN_predicted_peptide_3|147_aa
MVHFTAEEKAAVTSLWSKMNVEEAGGEALGRLLVVYPWTQRFFDSFGNLSSPSAILGNPK
VKAHGKKVLTSFGDAIKNMDNLKPAFAKLSELHCDKLHVDPENFKLLGNVMVIILATHFG
KEFTPEVQAAWQKLVSAVAIALAHKYH

>gi568815587r:5249805_5354728|GENSCAN_predicted_CDS_3|444_bp
atggtgcattttactgctgaggagaaggctgccgtcactagcctgtggagcaagatgaat
gtggaagaggctggaggtgaagccttgggcagactcctcgttgtttacccctggacccag
agattttttgacagctttggaaacctgtcgtctccctctgccatcctgggcaaccccaag
gtcaaggcccatggcaagaaggtgctgacttcctttggagatgctattaaaaacatggac
aacctcaagcccgcctttgctaagctgagtgagctgcactgtgacaagctgcatgtggat
cctgagaacttcaagctcctgggtaacgtgatggtgattattctggctactcactttggc
aaggagttcacccctgaagtgcaggctgcctggcagaagctggtgtctgctgtcgccatt
gccctggcccataagtaccactga

>gi568815587r:5249805_5354728|GENSCAN_predicted_peptide_4|208_aa
MTEGSLIILGCMNQIINRNVETNYGEAGYERALNEMETAMLPAHSGLQHVEIWGFVKTGL
KSEAPLDKSKFQKIASTTVRDILPVSEPDVNLAMGWDPPPVEPSNQLLQSKSNAAAKHKL
RYCGCEKLEVDIPALWPLLLTFTSCRLEVVVQATVADHTSSTIIAFLQESLREKKTYEIS
DEKGERRKAELTVMSDEGAFSSGYQWGL

>gi568815587r:5249805_5354728|GENSCAN_predicted_CDS_4|627_bp
atgactgaaggctctctcataattcttggttgcatgaatcagattatcaacagaaatgtt
gagacaaactatggggaagcagggtatgaaagagctctgaatgaaatggaaaccgcaatg
cttcctgcccattcagggctccagcatgtagaaatctggggctttgtgaagactggctta
aaatcagaagccccattggataagagcaagttccagaagatagcatcaaccactgttaga
gatatactgccagtctcagagcctgatgttaatttagcaatgggctgggaccctcctcca
gtagaaccttctaaccagctgctgcagtcaaagtcgaatgcagctgcaaaacacaaactc
agatattgtggatgcgagaaattagaagtagatattcctgccctgtggcccttgcttctt
acttttacttcttgtcgattggaagttgtggtccaagccacagttgcagaccatacttcc
tcaaccataattgcatttcttcaggaaagtttgagggagaaaaagacttatgaaatttct
gatgagaaaggagagaggagaaaggcagagctgactgtgatgagtgatgaaggtgccttc
tcatctgggtaccagtggggcctctaa

>gi568815587r:5249805_5354728|GENSCAN_predicted_peptide_5|267_aa
MTGVKLQTFTVNVPALKAAPLELFVPPGGFVVSLASRVKLQTFAVSVTAHKGSVDPNNIR
VLRIPSKLRSLAGFTQWIPHLGCRGSCLPVPCRAPALFSPWVVDGTGCPGAGGGARRRGS
GRTGAHEGGEAQAWRAAGPEPCPAGRQLRPGEELSTAAAGPGAKPLTARGRWGRLAAPSA
GSSEPMPTRNSLKHGAQPGSCPRLSLHTSWQAEGAGSGLGQPRKGLPQCSGRLKGSSSAT
NVGAQAEEAPRASEGCEDCQHAVTSQY

>gi568815587r:5249805_5354728|GENSCAN_predicted_CDS_5|804_bp
atgaccggagtgaagctgcagaccttcacagtgaacgttccagctcttaaggcggcgcct
ctggagttgttcgttcctcccggtgggttcgtggtctcgctggcttcaagagtgaagctg
cagaccttcgcggtgagcgttacagctcataaaggcagtgtagacccaaacaacataagg
gttcttcgcatccccagcaaactcaggagcctagccggcttcacccagtggatcccgcac
ctgggctgcagggggagctgcctgccagtcccctgccgtgcgcccgcactcttcagccct
tgggtggtcgatgggactgggtgccctggagcagggggcggcgctcgtcggcgaggctcg
ggccgcacaggagcccatgaaggtggggaggctcaggcatggcgcgctgcaggtcccgag
ccctgccccgcaggaaggcagctaaggcccggcgaggaattgagcacagcagctgctggc
ccaggtgctaagcccctcactgcccgcggccggtggggccggctggcggctccgagtgcg
gggtcctcggagcccatgcccacccggaactccctcaagcacggcgcacagcccggttcc
tgcccgcgtctgtccctccacacctcctggcaagctgagggagccggctctggccttggc
cagcccagaaaagggctcccacagtgcagcggccggctgaagggctcctcaagtgccacc
aatgtgggagcccaggcagaggaggcgccaagagcgagcgagggctgtgaggactgccag
cacgctgtcacctctcaatactaa

>gi568815587r:5249805_5354728|GENSCAN_predicted_peptide_6|310_aa
MWYNNSAGPFLLTGFLGSEAVHYRISMSFFVIYFSVLFGNGTLLVLIWNDHSLHEPMYYF
LAMLADTDLGMTFTTMPTVLGVLLLDQREIAHAACFTQSFIHSLAIVESGILLVLAYDCF
IAIRTPLRYNCILTNSRVMNIGLGVLMRGFMSILPIILSLYCYPYCGSRALLHTFCLHQD
VIKLACADITFNHIYPIIQTSLTVFLDALIIIFSYILILKTVMGIASGQEEAKSLNTCVS
HISCVLVFHITVMGLSFIHRFGKHAPHVVPITMSYVHFLFPPFVNPIIYSIKTKQIQRSI
IRLFSGQSRA

>gi568815587r:5249805_5354728|GENSCAN_predicted_CDS_6|933_bp
atgtggtataacaacagtgctggccccttcttgctgactggcttcttgggctcagaggca
gttcactaccggatctctatgtccttctttgtcatctacttctccgtcctttttggaaat
ggcactcttcttgtcctcatttggaatgatcacagcctccatgagcccatgtactacttc
ctggctatgctggcagacacggaccttgggatgacattcactacaatgcccacagtcctg
ggtgtcctgctgctagaccagagggagattgcccatgctgcctgtttcacccaatccttc
attcattcactggccattgtagaatcaggtatcttgcttgttttggcctatgactgtttc
attgccatccgcacaccactgaggtacaactgcattcttaccaattcccgagtgatgaac
ataggactgggggtactgatgagaggttttatgtccattttgcccataattctttcactc
tactgctacccatattgtggttcccgtgccctcttgcacacattttgcctccatcaagat
gtcataaaactcgcctgtgctgatatcacgtttaatcacatatatccaattattcagact
tctttgactgtctttttagatgctctaatcatcatcttttcttatatactaatcctcaag
acagtgatgggcattgcgtctggacaagaggaagctaaatctctcaacacttgtgtctcc
catattagctgtgtcctagtatttcacatcactgtgatgggactgtcattcattcacagg
tttgggaaacatgcacctcatgtggtccccattaccatgagctatgtccattttctcttt
cctccattcgtgaatcctatcatttatagcatcaagaccaagcagattcaaagaagcatt
attcgcctattttctgggcagagtagggcttga

>gi568815587r:5249805_5354728|GENSCAN_predicted_peptide_7|226_aa
MGVDNVNLQEAGPMDNLFVIHPQDAHYSGHHGQFHHEVLPQCGKETVHGFVKTVVMLDED
AHYSRHRGQCHHEVCACQHGEEVVHGLMKTVVMLDEVEEHAIAQKDAHINSKEGDGDPVM
SCLQPWKASQQKRGCSNIGPHSVSTENTKDSGHCCQSYTKVYGCQYSQRVVHGLMKSAVF
SDKEEEAAIAKDCRDIDDKEGDRTPRMKSLQTWKASEEKRGSSNGG

>gi568815587r:5249805_5354728|GENSCAN_predicted_CDS_7|681_bp
atgggagtggataatgtaaacctgcaagaagcaggccccatggataacctctttgtgatt
catccacaagacgcccattacagtgggcatcatggtcaatttcaccatgaggtcttgcct
cagtgtggcaaggaaacagtacatgggttcgtgaagactgtggtcatgcttgatgaggat
gcccattacagtaggcatcgtggtcaatgtcaccatgaggtctgtgcctgccagcatggt
gaggaagtagtacatgggctcatgaagactgtggtcatgcttgatgaggtagaggagcat
gccattgcccagaaggatgcacacataaacagcaaagaaggggatggagatccagtgatg
agctgcctccagccctggaaagccagtcagcaaaaaaggggctgcagtaatattgggcca
catagtgtatccaccgagaacaccaaggacagtggacattgttgtcaaagttacaccaag
gtctatggctgccagtatagtcagagagtagtacacgggctcatgaagagtgcagtcttc
tctgataaagaggaggaggctgccattgccaaggactgtagagacatagatgataaagaa
ggagatagaactccaaggatgaaatctctccagacctggaaagccagtgaggagaaaagg
ggcagcagtaatggtgggtga

>gi568815587r:5249805_5354728|GENSCAN_predicted_peptide_8|250_aa
MLAATDLGLALTTMPTVLGVLWLDHREIGSAACFSQAYFIHSLSFLESGILLAMAYDRFI
AICNPLRYTSVLTNTRVVKIGLGVLMRGFVSVVPPIRPLYFFLYCHSHVLSHAFCLHQDV
IKLACADTTFNRLYPAVLVVFIFVLDYLIIFISYVLILKTVLSIASREERAKALITCVSH
ICCVLVFYVTVIGLSLIHRFGKQVPHIVHLIMSYAYFLFPPLMNPITYSVKTKQIQNAIL
HLFTTHRIGT

>gi568815587r:5249805_5354728|GENSCAN_predicted_CDS_8|753_bp
atgctggctgccacagacctggggctggccctgaccacaatgcccacggtgctgggagtc
ctctggctggatcacagggagattggaagtgcggcctgcttttcccaggcctactttata
cactcactttcctttctcgagtctggcattctgcttgccatggcctatgaccgttttatt
gccatctgcaaccctcttagatatacctctgtacttactaatactcgagtagtgaagatt
gggctgggagttctgatgaggggatttgtatccgttgttcccccaatcaggcccctctat
ttttttctgtattgtcactcccatgttctttcacatgcattctgccttcaccaggatgtc
attaaactcgcctgtgctgataccaccttcaaccgactgtacccagctgtgcttgtagtc
tttatatttgtgctggattatctgattatcttcatctcctatgtgttgatactcaagact
gtcctgagcattgcctccagagaggagagggccaaggctctcattacctgtgtctcccat
atctgctgtgtcctggttttttatgtcacagtgattggattgtctctgattcatcgtttt
ggaaagcaggttccacatattgttcacctcattatgagctatgcctattttctgttccct
ccactaatgaatcctataacatatagtgtcaagaccaagcagattcagaatgccattctt
cacctttttactacccatagaattggaacctga

>gi568815587r:5249805_5354728|GENSCAN_predicted_peptide_9|312_aa
MGLNKSASTFQLTGFPGMEKAHHWIFIPLLAAYISILLGNGTLLFLIRNDHNLHEPMYYF
LAMLAATDLGVTLTTMPTVLGVLWLDHREIGHGACFSQAYFIHTLSVMESGVLLAMAYDC
FITIRSPLRYTSILTNTQVMKIGVRVLTRAGLSIMPIVVRLHWFPYCRSHVLSHAFCLHQ
DVIKLACADITFNRLYPVVVLFAMVLLDFLIIFFSYILILKTVMGIGSGGERAKALNTCV
SHICCILVFYVTVVCLTFIHRFGKHVPHVVHITMSYIHFLFPPFMNPFIYSIKTKQIQSG
ILRLFSLPHSRA

>gi568815587r:5249805_5354728|GENSCAN_predicted_CDS_9|939_bp
atggggctcaataagtctgcttccaccttccagcttactggcttcccaggcatggagaag
gcacatcactggatattcatcccattattggcagcctacatctccatacttcttggcaat
ggcactcttctctttctcatcaggaatgatcataacctccatgagcccatgtactatttc
ttagctatgttggcagctacagacctcggagtgacattgaccacaatgcccacagtgcta
ggtgttctgtggttagatcacagggagattggccatggagcctgcttctctcaggcctat
tttatccatactctttctgtcatggagtcaggtgtcttgcttgccatggcttatgactgt
ttcattaccatccgcagccccttaagatatacctctatcctgaccaacacccaggtaatg
aagattggtgtgcgggtattgacaagggctggtctgtccattatgccaatagttgttcgc
ctacactggtttccctactgtcgatcccatgtactctcccatgctttctgtctacaccaa
gatgtcatcaagctagcctgtgctgacatcaccttcaaccgtctctatccagttgtagtt
ttatttgcaatggtcttgttggactttctcatcatctttttctcctacattttgattctc
aagactgtcatgggcattggttctggaggagaaagggccaaggccctcaacacatgtgtc
tctcatatctgctgcatcctggtcttctatgtcactgtagtttgtctgacatttattcat
aggtttggaaagcatgttcctcatgtcgttcacatcacaatgagctacatccacttcctt
ttcccaccttttatgaacccatttatctatagcattaaaactaagcagattcagagtggc
atacttcgtttattctctctgcctcactctagagcatga