GENSCAN 1.0	Date run:  6-Nov-116	Time: 21:25:19

Sequence gi568815587r:34782720_35016284 : 233565 bp : 38.86% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   4844   4883   40                              -1.95
 1.01 Sngl +  14987  15268  282  1  0   37   41   192 0.665   4.64
 1.02 PlyA +  18870  18875    6                               1.05

 2.02 PlyA -  19136  19131    6                               1.05
 2.01 Sngl -  36964  36584  381  1  0   53   55   243 0.965  13.42
 2.00 Prom -  37508  37469   40                              -8.95

 3.05 PlyA -  38027  38022    6                               1.05
 3.04 Term -  42013  41889  125  2  2   99   41    55 0.388  -0.53
 3.03 Intr -  42448  42394   55  1  1   79   98    30 0.494   0.73
 3.02 Intr -  43093  42916  178  0  1   86   69    85 0.506   5.40
 3.01 Init -  54928  54834   95  1  2   80   81   125 0.709  10.90
 3.00 Prom -  56357  56318   40                              -4.25

 4.03 PlyA -  56838  56833    6                               1.05
 4.02 Term -  59571  59336  236  1  2  116   42   144 0.072   8.10
 4.01 Init -  64090  64036   55  1  1   69   78    53 0.065   3.96
 4.00 Prom -  66124  66085   40                              -5.25

 5.00 Prom +  66261  66300   40                              -7.45
 5.01 Init +  66499  66627  129  0  0   48   75    63 0.109   1.23
 5.02 Intr +  76678  76817  140  0  2   46   44   139 0.012   3.64
 5.03 Intr +  83254  83441  188  1  2   63  101    70 0.234   4.21
 5.04 Intr +  87485  87597  113  0  2   88   83    53 0.412   3.98
 5.05 Intr +  90059  90154   96  1  0   58   19   184 0.363   7.79
 5.06 Term +  92201  92467  267  1  0   22   43   195 0.312   2.91
 5.07 PlyA +  93231  93236    6                               1.05

 6.00 Prom +  94013  94052   40                              -3.15
 6.01 Init + 109161 109292  132  2  0   62  119    64 0.626   7.09
 6.02 Intr + 117843 118028  186  2  0   29   34   203 0.350   7.96
 6.03 Intr + 119610 120153  544  2  1   -6   69   328 0.072  13.04
 6.04 Term + 124223 124356  134  0  2   80   42   168 0.958   8.67
 6.05 PlyA + 125351 125356    6                               1.05

 7.00 Prom + 125463 125502   40                              -9.25
 7.01 Init + 126691 126819  129  0  0   78   30   114 0.429   4.80
 7.02 Intr + 127241 127375  135  1  0   64   92    55 0.640   3.34
 7.03 Intr + 129896 130086  191  1  2    4   94   154 0.617   5.06
 7.04 Intr + 130541 130635   95  2  2   53  101    65 0.689   2.99
 7.05 Term + 130736 130878  143  0  2   38   43   130 0.648   0.61
 7.06 PlyA + 130931 130936    6                              -0.45

 8.00 Prom + 131580 131619   40                              -8.25
 8.01 Init + 133937 134096  160  1  1  105   84    91 0.360   8.45
 8.02 Intr + 148685 148765   81  0  0  115  100    30 0.513   5.59
 8.03 Intr + 159032 159148  117  0  0   41   51   165 0.756   7.62
 8.04 Intr + 164787 164887  101  1  2   65  103   125 0.972  10.61
 8.05 Intr + 174665 174864  200  1  2   57  113   203 0.993  16.93
 8.06 Intr + 183921 184095  175  0  1   88   17   137 0.976   5.62
 8.07 Intr + 187420 187567  148  0  1   91   96   172 0.842  17.19
 8.08 Intr + 195405 195463   59  1  2   99  106    54 0.452   5.98
 8.09 Intr + 199782 201134 1353  2  0  -25   86   562 0.065  32.40
 8.10 Intr + 201851 202009  159  1  0   90   95   180 0.989  18.16
 8.11 Intr + 209596 209660   65  0  2   77   66    45 0.934  -2.20
 8.12 Intr + 212195 212401  207  2  0   91    9   315 0.040  21.17
 8.13 Intr + 225696 225767   72  0  0   89   59    85 0.225   3.30
 8.14 Term + 230008 230065   58  1  1  105   42   108 0.921   4.08
 8.15 PlyA + 230148 230153    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  59617  59336  282  1  0  103   42   171 0.882   9.24
S.002 Sngl -  64090  63806  285  1  0   69   44   189 0.876   7.90
S.003 Term +  77534  77748  215  0  2  100   48   154 0.977   9.01
S.004 Term - 100097  99998  100  1  1  131   46    99 0.971   6.62
S.005 Term + 212195 212453  259  2  1   91   37   333 0.942  22.54
S.006 Init + 229098 229165   68  2  2   91   95    26 0.815   4.20


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587r:34782720_35016284|GENSCAN_predicted_peptide_1|93_aa
MSRQRFAAEAEPSWTTSTRAVQKGNVGLEPLQTLPSGAMRRGPPFSRPQNGSSSDSLHCV
PGKAADTQQQPMKEAGWGAVPCKATGAELPKAM

>gi568815587r:34782720_35016284|GENSCAN_predicted_CDS_1|282_bp
atgtccaggcagaggtttgctgcagaggcagagccctcatggacaacatctactagggca
gtgcagaagggaaatgtggggttggagcccttacagactctgcctagtggagctatgaga
agagggccaccattctccagaccccagaatggtagctcctctgacagcttgcactgtgtg
cctggaaaagctgcagacactcaacagcagcccatgaaagaagctggctggggagctgta
ccctgcaaggccacaggggcagagctacccaaggccatgtga

>gi568815587r:34782720_35016284|GENSCAN_predicted_peptide_2|126_aa
MWESLEHPRDLLNGLAQNADSDMDNKFQAEVVSDGNEELLGNWSKGDPCYVLAKRLEAFC
PCPTDVQNIELERDDLGYLAEEISKQQSIQEVTWVQLKAFSFKREAEHKSSENLQPDKAI
EKKIIF

>gi568815587r:34782720_35016284|GENSCAN_predicted_CDS_2|381_bp
atgtgggaaagtttggaacatcctagagacttgctaaatggcttagcccaaaatgctgat
agtgatatggacaataaattccaggctgaggtggtctcagatggaaatgaggaacttctt
gggaactggagcaaaggtgacccttgttatgttttagcaaagagactggaggcattttgc
ccctgccctacagatgtacagaacattgaactcgagagagatgatttagggtatctggca
gaagaaatttctaagcagcaaagcattcaagaggtgacttgggtgcagttaaaggcattc
agcttcaaaagggaagcagagcataaaagttcagaaaatttgcagcctgacaaagctata
gaaaagaaaatcattttctga

>gi568815587r:34782720_35016284|GENSCAN_predicted_peptide_3|150_aa
MPADIARCPLQGSITPSGDSLNWEKRLENGESKHNVLTLKQVRPVAARPSKTQCSTVELA
IHNGPIESGSRHFPLWAAQIEELGLDPRDWWLLGWRRRSSGYGKLGIGEDPGFSDPSDLP
MATEELVADLLPICSSFHCSHGHLCSAAGD

>gi568815587r:34782720_35016284|GENSCAN_predicted_CDS_3|453_bp
atgcctgcagacattgccagatgtcccctgcagggcagcatcacccccagtggagactca
ctgaactgggagaagaggctggagaatggagaaagcaaacacaatgtactgactctaaaa
caggtacgaccagttgctgccaggccctcaaagacacagtgttctactgtggaattagcc
atacataatgggcccattgaatcaggcagcaggcactttcctctctgggctgcacagata
gaggagttgggcctagaccccagggactggtggttacttggatggaggaggagaagcagt
ggctatggcaaacttggaataggagaagaccctggattttcagacccaagtgacttgccc
atggccacagaagaactggtggcagatctgcttcctatctgtagctctttccactgctca
catggccacttgtgttcagcagctggtgactag

>gi568815587r:34782720_35016284|GENSCAN_predicted_peptide_4|96_aa
MSAFCVPVSVIGYWLLSGGVPATKIWEPMGGKAPQWARLTPVLLGNQVWEGWKQQMGSVL
LKPEVSMKTSLTQDAGFQPPNISAELQEVQHSFGFQ

>gi568815587r:34782720_35016284|GENSCAN_predicted_CDS_4|291_bp
atgtcagccttttgtgtccctgtgtcagtcattggctactggctgctctcggggggtgtc
ccggcaactaaaatctgggagccaatgggaggcaaagctcctcaatgggctagactgaca
ccagtgctgcttgggaaccaggtttgggaaggatggaagcagcagatgggctcagtctta
cttaaacctgaagtctctatgaagacctcactcacccaagacgctggctttcagcccccc
aacatctcagcagaactccaagaagtacaacattcatttggcttccaatga

>gi568815587r:34782720_35016284|GENSCAN_predicted_peptide_5|310_aa
MTAFRVGAYASQVTSGILTQVCLTVDKQRPWICPVIMTPAPKCDSGKREESEELDHDTLE
LQVKDGSGGYCFFPPAGVEPRHQPPCRTGRSAAALGSHRSVNPIVNCACKGSRLHVPYEN
LMPDDVSLSPITPRWDHLVASSSSGLLPILHYVCYPTSPLVKVSIIGPSPYARGYLPHPP
LDGVLSVNLVLDIVEIGSEDTQQMVSAAELVAGGEKSPTSILLHEQRNRRVAERQSSRVA
WHRRREEKERLNINRSSAGDSQRGDRLWGSQTLGEYHLPIPSSFQLPIHPTESYFYHPIK
SLHSPSFKSE

>gi568815587r:34782720_35016284|GENSCAN_predicted_CDS_5|933_bp
atgaccgcttttagggtaggggcttatgcaagtcaggtaacaagtggaattctgacccag
gtttgtctcacagttgataaacagaggccatggatctgcccagtgatcatgaccccagct
cccaaatgtgattctgggaagagggaggagagtgaagaacttgaccatgatacgctggag
ctgcaggtcaaagatggctcaggaggttactgcttcttcccacctgctggtgtggagcca
aggcaccagcctccctgcaggacaggcagatcagcagcggcattaggttctcataggagt
gtgaaccctattgtgaactgtgcatgcaagggatctaggttgcatgttccttatgagaat
ctaatgcctgatgatgtgtcactgtctcccatcacccccagatgggaccatctagttgca
tctagtagctcagggctcctgccaattctacattatgtgtgctatcccacttcaccactg
gtgaaagtttcaataattggaccatcaccttatgccaggggctatctaccccacccacct
ctagatggggtcctcagtgtcaacttggtgttagatattgttgaaattggatcggaggac
acccagcagatggtgtctgctgcagaattggttgctggtggggaaaaatccccgacatcc
atcttgctccacgagcagaggaacagaagagtagcagaacgacagagcagcagagtggca
tggcatagaagaagagaagagaaggagcgtctgaacatcaacaggagttcagctggggac
agtcagagaggagatcggctgtggggcagccaaactctgggggaatatcaccttcccatt
ccatcctctttccagctccccatccatcccactgagagctacttctatcacccaataaaa
tccctgcactcaccatccttcaagtctgagtga

>gi568815587r:34782720_35016284|GENSCAN_predicted_peptide_6|331_aa
MEEALGWYMVHSPPQISGLVGLLMWGEIYAVLGIDSNKVQNGLLRDVTLLLRQTLTEAEK
QKVLQAAEKYGDEQHASCSKPRRQRGDREGEEEVETPFLLGKEAVLGLALVDDILLCAPT
EEASQEGTEALLNFSANRGYKVSKSKAQLCKTSVKYLGLVLSKGTRVLGEERIKPISSFP
HPQTLKQLRGFWGITGFCRLWIPGYGEIARPLYNLIKETQGAKTHLLTWEPEAQKAFNQL
KQALLKVPALSLPVGKAFNLYVSEKKGMSLGVLTQARGPAQQSMGYLKAINPNGAANRTT
RGRAILPRTLRSTPGGALAVVPHLMSLFGRK

>gi568815587r:34782720_35016284|GENSCAN_predicted_CDS_6|996_bp
atggaagaagctctaggatggtacatggtccactcacctccacagataagtggacttgtg
ggtcttcttatgtggggagaaatttatgcagtcctgggaatagactcaaataaagtacaa
aatggtctgctgagggatgttacgttgctgctacgtcagaccctcactgaagctgaaaag
cagaaagttctgcaggcagcagaaaaatatggagatgagcaacatgcctcctgtagcaaa
ccgaggagacaaagaggagatagggaaggtgaggaagaagtggaaactccattcctacta
ggaaaggaagcagttctgggtcttgcattagttgatgatattctgctctgtgccccaact
gaggaagcttctcaggaaggcaccgaagctcttctcaacttctcagctaacagaggatat
aaggtttcaaaatccaaggcccagctctgcaaaacctcagtgaagtatctaggattagta
ctgtccaaggggaccagagtattaggggaagagaggattaagcctatttcctccttccct
cacccccaaaccctcaagcaactaagaggattttggggcattacaggattttgtagacta
tggatacctgggtatggtgaaatagcccgtccattatataacctcataaaagaaactcag
ggagctaaaactcatcttttaacctgggaacctgaagctcaaaaggccttcaaccagcta
aagcaagccttgctcaaggtgccagccctcagccttcctgtagggaaggccttcaatctg
tatgtgtcagaaaagaagggaatgtccctgggagttttaacacaggcccgaggaccagct
caacagtcaatgggttacctaaaagcaatcaatccaaatggtgctgcaaaccgaaccaca
cgtggacgtgccattcttccgaggacccttagatcaaccccaggaggagccctagctgtt
gttccccacttgatgtcccttttcggcaggaagtag

>gi568815587r:34782720_35016284|GENSCAN_predicted_peptide_7|230_aa
MGLGEKRQGSTLINAVKEGLSEQVAFNLGPKRHELSQCVMNEYYKQSHQLSMATGYERLD
KRIKGIKQSSLGVEHRTTRETKMGCWAALPAWLEYKQAEKCEKGDWPSLHLSPVLDASRL
EHWTPSSSVLELRLALLAPQPANGLLRDLGFTPFRSGPSLSRIGSFPWVLGLTDFKNEAA
DPCGVKLQTFTVSVTALKGGTQVVRSSRWVHGLADFRNEAADLRRECYSS

>gi568815587r:34782720_35016284|GENSCAN_predicted_CDS_7|693_bp
atgggacttggagaaaaacggcagggatcaactttgattaacgcagtcaaggaaggcctc
tctgagcaggtggcatttaatctaggacctaaaagacatgaactaagccagtgtgtgatg
aatgagtactataaacaaagtcatcagctgagtatggcaacagggtatgagaggcttgac
aagagaataaaaggtataaaacagtcatctttgggagtggaacaccgaactactagagaa
acaaagatgggctgttgggcagcactgccagcatggctagaatacaagcaggcagaaaaa
tgtgaaaagggagactggcctagcctacatctttctcccgtgctggatgcttcccgactt
gaacactggactccaagttcttcagttttggaactcagactggctctcctcgctcctcag
cctgcaaacggcctattgcgggatcttgggttcacgccctttaggtctggtcctagtttg
tccagaattggttccttcccgtgggttcttggtctcactgacttcaagaatgaagccgcg
gacccttgcggagtgaagctgcagactttcacagtgagtgttacagctcttaaaggtggc
acgcaggttgttcgttcctcccggtgggttcatggtctcgctgacttcaggaatgaagcc
gcagaccttcgcagggagtgttacagctcataa

>gi568815587r:34782720_35016284|GENSCAN_predicted_peptide_8|984_aa
MAASWRLGCDPRLLRYLVGFPGRRSVGLVKGALGWSVSRGANWRWFHSTQWLRGDPIKIL
MPSLSPTMEEGNIVKWLKKEEFKKRKGSLRILQSSALAAAHRTKEQDDDAGVGAGERPPG
EAVSAGDALCEIETDKAVVTLDASDDGILAKIVVEEGSKNIRLGSLIGLIVEEGEDWKHV
EIPKDVGPPPPVSKPSEPRPSPEPQISIPVKKEHIPGTLRDALKLVQLKQTGKITESRPT
PAPTATPTAPSPLQATAGPSYPRPVIPPVSTPGQPNAVGTFTEIPASNIRRVIAKRLTES
KSTVPHAYATADCDLGAVLKVRQDLVKDDIKVSVNDFIIKAAAVTLKINKIDRLLARLIK
KKREKNQIDAIKNDKGDITTDPTEMQTTVREYYKHLYVNKPENLEEMDKFLDTYTLPRLN
QEELESLNKPITGSEIEAIINSLPTKKSPGPDGFTAEFYQRYKEELLPFLLKLFQSIEKE
GILPNSFYEASIILIPKPGRDTTKKENFRPISLMNIDANILNNILANQIQQHIKKLIHHD
EVGFIPGMQGWFNIRKSINLIPHVNRTKDKNHMVISVDAEKAFDKIQQHFMLKTLNKLGI
DGTYLKIIRPIFDKPTADIILNRQKLEALPLKTGTRQRCSLSPLLFNIVLEVLARAIRQE
KEIKGIQLGKEEVKLSLFADDMIVYLENPIVSAQNLLKLIGNFSKVSEYTINVQKSQSFL
YTNNRQTESQIMSELPFTIASKRIKYLGIQLTREVKDFFKENYKPLLDEIKENTNKWKNI
PWSWVGRIDIVKMAILPKQMPDVNVSWDGEGPKQLPFIDISVAVATDKGLLTPIIKDAAA
KGIQEIADSVKALSKKARDGKLLPEEYQGGSFSISNLGMFGIDEFTAVINPPQACILAVG
RFRPVLKLTEDEEGNAKLQQRQLITVTMSSDSRVVDDELATRPEYATSTAILESLEKVMA
LSVLERMLAAEDEAWYENEQLVKA

>gi568815587r:34782720_35016284|GENSCAN_predicted_CDS_8|2955_bp
atggcggcctcctggaggctgggctgtgatccgcggctgctgcgttatcttgtgggcttc
cccggccgccgaagcgtagggctggtgaagggggctcttgggtggtctgtaagccgcgga
gctaattggagatggtttcacagcacgcagtggcttcggggtgatcccattaagatacta
atgccatcactgtctcctacaatggaagaaggaaacattgtgaaatggctgaaaaaggaa
gaatttaaaaagagaaagggaagcctccgtatacttcagtcctcagctctggcagctgcc
catcggacaaaggaacaggacgatgatgctggcgtcggtgctggggagcggcccccgggt
gaagcggtgagtgctggagatgcattatgtgaaattgagactgacaaagctgtggttacc
ttagatgcaagtgatgatggaatcttggccaaaatcgtggttgaagaaggaagtaaaaat
atacggctaggttcactaattggtttgatagtagaagaaggagaagattggaaacatgtt
gaaattcccaaagacgtaggtcctccaccaccagtttcaaaaccttcagagcctcgcccc
tcaccagaaccacagatttccatccctgtcaagaaggaacacatacccgggacactacgg
gatgctctcaaacttgtccagttgaaacaaacgggcaagattaccgagtccagaccaact
ccagcccccacagccactcccacagcaccttcgcccctacaggccacagctggaccatct
tatccccggcctgtgatcccaccagtatcaactcctggacaacccaatgcagtgggcaca
ttcactgaaatccccgccagcaatattcgaagagttattgccaagagattaactgaatct
aaaagtactgtacctcatgcatatgctactgctgactgtgaccttggagctgttttaaaa
gttaggcaagatctggtcaaagatgacattaaagtatcagtaaatgattttatcatcaag
gcagcagctgttacccttaaaatcaacaaaattgatagactgctagcaagactaataaag
aagaaaagagagaagaatcaaatagacgcaataaaaaatgataaaggcgatatcaccacc
gatcccacagaaatgcaaactaccgtcagagaatactataaacacctctacgtaaataaa
ccagaaaatctagaagaaatggataaattcctcgacacatacaccctcccaagactaaac
caggaagaacttgaatctctgaataaaccaataacaggctctgaaattgaggcaataatt
aatagcttaccaactaaaaaaagtccaggaccagatggattcacagccgaattctaccag
aggtacaaggaggagctgttaccattccttctgaaactattccaatcaatagaaaaagag
ggaatcctccctaactcattttatgaggccagcatcatcctgataccaaagccgggcaga
gacacaacaaaaaaagagaattttagaccaatatccctgatgaacatcgatgcaaacatc
ctcaataacatactggcaaaccaaatccagcagcacatcaaaaagcttatccaccacgac
gaagttggcttcatccctgggatgcaagggtggttcaacatacgaaaatcaataaactta
atcccgcatgtaaacagaaccaaagacaaaaaccacatggttatctcagtagatgcagaa
aaggcctttgacaaaattcaacaacacttcatgctaaaaactctcaataaattaggtatt
gatgggacgtatctcaaaataataagacctatttttgacaaacccacagctgatatcata
ctgaataggcaaaaactggaagcattgcctttgaaaactggcacaaggcagagatgctct
ctctcaccactcctattcaacatagtgttggaagttctggcgagggcaatcaggcaggag
aaagaaataaagggtattcaattaggaaaagaagaagtcaaattgtccctgtttgcagat
gacatgattgtatatctagaaaaccccattgtctcagcccaaaatctccttaagctgata
ggcaacttcagcaaagtctcagaatacacaatcaatgtgcaaaaatcacaatcattctta
tacaccaataacagacaaacagagagccaaatcatgagtgaactcccattcacaattgct
tcaaagagaataaaatacctaggaatccaacttacaagggaggtgaaggacttcttcaag
gagaactacaaaccactgctcgatgaaataaaagagaatacaaacaaatggaagaacatt
ccatggtcatgggtaggaagaatcgatattgtgaaaatggctatactgcccaagcaaatg
ccagatgttaatgtaagctgggatggagagggcccaaagcaactgccatttattgacatt
tcagtggctgtggcaacagataaaggcttacttactccaatcataaaagatgctgctgct
aaaggtatccaggaaattgctgactctgtaaaggctctatcaaagaaagcaagagatgga
aaattgttgcctgaagaataccaaggaggatcttttagtatttccaacttggggatgttt
ggcatcgacgaatttactgcagtgattaaccctcctcaggcctgcattttggcggttggg
aggttccgacctgtgctgaagctcactgaggatgaagagggaaatgccaaactgcagcag
cgccagctcataacagtcacaatgtcaagtgacagtcgagtggttgatgacgaactggca
accagaccagaatatgcaacaagcacagcgatcttggagagcttggagaaggtcatggct
ctaagtgtcctggagaggatgttggcagcagaagatgaggcttggtatgaaaatgaacag
cttgtgaaagcgtaa