GENSCAN 1.0	Date run:  4-Nov-116	Time: 23:33:55

Sequence gi568815587r:116935800_117136051 : 200252 bp : 40.90% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   6852   6981  130  2  1   76   69   154 0.939  12.66
 1.02 Term +  10636  10703   68  2  2   61   49    46 0.104  -4.88
 1.03 PlyA +  10736  10741    6                               1.05

 2.05 PlyA -  11018  11013    6                               1.05
 2.04 Term -  13018  12917  102  1  0  109   32    68 0.636   0.60
 2.03 Intr -  15367  15320   48  1  0   68  116    53 0.637   4.06
 2.02 Intr -  21265  21149  117  1  0   86   91   103 0.997  10.14
 2.01 Init -  22991  22935   57  2  0   71   85    48 0.829   4.16
 2.00 Prom -  35651  35612   40                              -5.55

 3.04 PlyA -  36752  36747    6                               1.05
 3.03 Term -  44605  44420  186  1  0  107   53    86 0.543   3.51
 3.02 Intr -  66102  66039   64  2  1  111   97    26 0.103   3.60
 3.01 Init -  71005  70971   35  1  2   95   97    -8 0.042  -0.16
 3.00 Prom -  84612  84573   40                              -4.15

 4.00 Prom +  85817  85856   40                              -3.35
 4.01 Init + 105424 105483   60  0  0   66   95    46 0.536   4.40
 4.02 Intr + 119621 119749  129  1  0   58   94    91 0.477   6.67
 4.03 Intr + 133555 133609   55  0  1  119  115   -32 0.057   0.23
 4.04 Intr + 136010 136097   88  0  1  126   64     4 0.038  -0.09
 4.05 Intr + 159663 159919  257  0  2   62   13   174 0.353   3.46
 4.06 Intr + 160761 160915  155  1  2  103   99   140 0.411  15.47
 4.07 Term + 167425 167496   72  0  0   99   34    66 0.136  -0.77
 4.08 PlyA + 168763 168768    6                               1.05

 5.03 PlyA - 171739 171734    6                               1.05
 5.02 Term - 174678 174524  155  1  2  114   42   131 0.689   8.20
 5.01 Intr - 176327 176214  114  0  0   53   86    93 0.255   5.10

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587r:116935800_117136051|GENSCAN_predicted_peptide_1|65_aa
MWICRKRVIQEEEMEYMVLKREHSEGFNEKERCRCEEESARSCGHCKGDQMTPTHTVGSI
IGEEP

>gi568815587r:116935800_117136051|GENSCAN_predicted_CDS_1|198_bp
atgtggatatgtaggaaaagagtaattcaggaagaagaaatggaatatatggtcttaaag
cgggagcacagcgaagggtttaatgaaaaagaaagatgccgatgtgaggaggagagtgct
aggagctgtgggcactgcaaaggggaccagatgacgcctacacacacagtcgggtccatt
ataggagaggaaccctga

>gi568815587r:116935800_117136051|GENSCAN_predicted_peptide_2|107_aa
MQVVKGYIIQDFLQETKQLVAIKIIDKTQLDEENLKKIFREVQIMKMLCHPHIIRLYQSK
LLDDSGAQVPGLYKCLEAKQKEGNKDYSRNYEIENRKTIEDISETKR

>gi568815587r:116935800_117136051|GENSCAN_predicted_CDS_2|324_bp
atgcaggtggtcaagggttatattatccaagacttcttacaggaaaccaagcagctggtt
gctatcaagatcatagataagacccagctggatgaagaaaacttgaagaagattttccgg
gaagttcaaattatgaagatgctttgccacccccatatcatcaggctctaccagagcaaa
ttactagatgattctggtgcacaggttccaggtctgtataagtgtcttgaagccaagcag
aaagaaggaaataaagattatagcagaaattatgaaatagagaatagaaaaacaatagag
gatatcagtgaaaccaaaagatag

>gi568815587r:116935800_117136051|GENSCAN_predicted_peptide_3|94_aa
MASVHFCYPILRWTDRIKFAFVNSCDNVEGGLKAFSSVKPLFLVSLSSDKRKRGLRKGLY
RTNQKQELRTQACVPSLGHPCKMILLSRRLTSVF

>gi568815587r:116935800_117136051|GENSCAN_predicted_CDS_3|285_bp
atggccagtgtgcatttttgttatcccatccttaggtggacagatagaatcaagtttgct
tttgttaattcatgtgacaatgtagaaggtggactgaaggcttttagcagtgtgaagcca
ttgtttttagtttctctctctagtgataagcggaaaagagggttgaggaaggggctttac
cgaaccaaccagaaacaggaactaagaacccaagcctgtgttccctcccttggacacccc
tgtaagatgattttgctcagtcgtaggctaacatcagtgttctga

>gi568815587r:116935800_117136051|GENSCAN_predicted_peptide_4|271_aa
MGKKIAKQVRGDVEESQVSQRKKQKHRDKVNHSVSLREKIMEPDSNPGLSGLDEGTEEKV
GLQQISDTFRHPYVFQYIFLKGERESPYVDQAGLELKESSHLSLPKYRDYRSKIKAAVHG
EKKNQPELTEAAASATSSTYAPSPLLYNQTITLIGHRTVCRQLLGTSKLSAFENPFQSGF
REAWSRPKYAPSSPRARSEGALDFGISFSSDLQTGGPVIKTDKKAEEGPPEEVKLTNQFA
TATHPDTLIHLVTSQFPQGIRSRSEQPRITT

>gi568815587r:116935800_117136051|GENSCAN_predicted_CDS_4|816_bp
atggggaaaaaaatagcaaagcaagtcagaggagatgtggaagaaagccaggtttcacag
agaaagaaacagaaacatagagacaaagtaaatcattccgtgtctcttagggagaaaata
atggagccagattcaaatcctggtctctctggtttggatgagggaacagaagagaaggtg
gggctacagcaaatctcagacacattccgtcatccatatgtatttcagtatatatttcta
aaaggagagagagaatctccctatgttgaccaggctggtctagaactcaaggaatcctcc
cacctcagccttccaaagtaccgggattacagaagtaagataaaggctgcagtgcatggg
gagaaaaaaaatcaacctgagttaactgaagcagcagcttcggcaacttctagtacctat
gcaccttcaccattgttatataaccaaaccataaccttaataggccatcgtactgtatgt
cgacagctgttaggcacatctaagctgtccgcatttgagaaccccttccaaagtggattc
agagaagcatggagcaggccaaaatatgctcctagttcacccagagcacggtctgaggga
gccctggactttggtatctcattcagctctgacctgcagactggaggccctgtgataaaa
acggacaaaaaggctgaagagggccctccagaggaagtgaaactgaccaatcaattcgcc
acagccacccaccctgacaccctgatccacctggtcacatcccaatttccccagggcatc
cgaagcaggtctgagcagccaaggataactacttag

>gi568815587r:116935800_117136051|GENSCAN_predicted_peptide_5|89_aa
XELQTTARQNKRGHKQMEEHSMLMDRKNQCRENGHNAQAPGPMDRPRAEEWGHRAQDWWA
APPADAVEYPLGEASWVPASIGDLENLYV

>gi568815587r:116935800_117136051|GENSCAN_predicted_CDS_5|270_bp
ngagaactacaaaccactgctcgacaaaataaaagaggacacaaacaaatggaagaacat
tccatgctcatggataggaagaatcaatgtcgtgaaaatggccacaatgcccaagcgcct
ggtcccatggaccgcccaagggctgaggagtgggggcacagggcgcaggactggtgggca
gctccccctgcggatgcagtggagtatccactaggtgaagccagctgggttcctgcgtct
attggggacttggagaacctttatgtctag