GENSCAN 1.0	Date run:  6-Nov-116	Time: 15:00:33

Sequence gi568815587r:107404661_107660893 : 256233 bp : 37.64% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 Intr -  11638  11549   90  1  0   48  107    31 0.262   0.27
 1.02 Intr -  13627  13534   94  0  1   46   95   110 0.532   6.55
 1.01 Init -  18920  18874   47  2  2   71   87    45 0.809   2.91
 1.00 Prom -  22276  22237   40                              -4.15

 2.09 PlyA -  22345  22340    6                               1.05
 2.08 Term -  24791  24120  672  2  0   61   37   412 0.912  26.16
 2.07 Intr -  36962  36843  120  2  0   99  110    96 0.999  12.67
 2.06 Intr -  38389  38279  111  1  0   39  121   110 0.978   9.06
 2.05 Intr -  49490  49374  117  2  0   42   84    53 0.412   0.04
 2.04 Intr -  51116  51006  111  2  0   92   68   167 0.977  14.76
 2.03 Intr -  53163  53052  112  2  1   34   82   173 0.299  10.76
 2.02 Intr -  61206  61019  188  0  2   62   71   162 0.549   9.47
 2.01 Init -  64083  63784  300  0  0   46   10   171 0.340   2.40
 2.00 Prom -  64821  64782   40                              -2.75

 3.05 PlyA -  65355  65350    6                               1.05
 3.04 Term -  77988  77650  339  0  0   42   48   147 0.051  -0.35
 3.03 Intr -  89721  89602  120  0  0  128   47    35 0.214   3.17
 3.02 Intr -  90313  90207  107  2  2  -12   71   156 0.068   2.91
 3.01 Init -  93229  93112  118  1  1   79   89    96 0.091   9.21
 3.00 Prom -  94493  94454   40                              -5.15

 4.16 PlyA -  94572  94567    6                               1.05
 4.15 Term - 100555  99998  558  1  0   81   38   407 0.303  28.36
 4.14 Intr - 106376 106227  150  2  0   83   92   115 0.986  10.84
 4.13 Intr - 112677 112560  118  2  1   73   83   -10 0.078  -3.45
 4.12 Intr - 115214 115190   25  0  1  104   92    17 0.090  -0.13
 4.11 Intr - 117895 117635  261  2  0   18   34   210 0.204   5.14
 4.10 Intr - 120932 120781  152  1  2   73   86    99 0.852   7.09
 4.09 Intr - 127746 127640  107  0  2   65   71    98 0.035   3.89
 4.08 Intr - 145163 145093   71  0  2   98   84    45 0.900   3.08
 4.07 Intr - 147252 147148  105  1  0   63  113    76 0.974   6.87
 4.06 Intr - 148543 148448   96  2  0  102   98    82 0.993   9.66
 4.05 Intr - 149318 149187  132  0  0   77   93   115 0.999  10.60
 4.04 Intr - 152343 152106  238  0  1   71   62   271 0.999  19.06
 4.03 Intr - 156239 156105  135  2  0  110   60    95 0.923   8.74
 4.02 Intr - 156378 156369   10  2  1   82   94     9 0.479  -5.76
 4.01 Init - 161043 160970   74  0  2   98   81    52 0.814   6.09
 4.00 Prom - 165047 165008   40                              -5.95

 5.11 PlyA - 165449 165444    6                               1.05
 5.10 Term - 165682 165524  159  1  0  -15   52   217 0.173   4.76
 5.09 Intr - 172775 172628  148  1  1   80   82    33 0.131   1.22
 5.08 Intr - 174340 174226  115  2  1   98   26   109 0.341   4.29
 5.07 Intr - 178478 178319  160  2  1   73  100   109 0.907   9.24
 5.06 Intr - 182225 182093  133  1  1   45   60    99 0.351   2.53
 5.05 Intr - 186676 186242  435  0  0   80   21   173 0.018   1.57
 5.04 Intr - 186794 186734   61  0  1   88   66    25 0.081  -2.83
 5.03 Intr - 187389 187159  231  1  0   82  -29   215 0.075   6.02
 5.02 Intr - 187882 187678  205  1  1   67   20   131 0.762   2.05
 5.01 Init - 197350 197258   93  1  0   92   73    66 0.324   5.93
 5.00 Prom - 219032 218993   40                              -4.65

 6.00 Prom + 222949 222988   40                              -4.35
 6.01 Init + 225893 225902   10  1  1   75  111     4 0.283   1.83
 6.02 Intr + 226040 226068   29  0  2   98  115     8 0.815   1.42
 6.03 Intr + 229224 229331  108  2  0   13   86   115 0.589   3.36
 6.04 Intr + 230995 231105  111  0  0   56   96    94 0.839   6.66
 6.05 Intr + 242808 242941  134  2  2   87   92   135 0.994  12.32
 6.06 Intr + 245675 245743   69  2  0   83   91   106 0.889   7.78
 6.07 Term + 247110 247296  187  0  1   31   51    96 0.539  -3.82
 6.08 PlyA + 247403 247408    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  90326  90207  120  2  0   58   71   165 0.888  12.04
S.002 Term - 143643 143485  159  0  0   13   52   152 0.814   1.06


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587r:107404661_107660893|GENSCAN_predicted_peptide_1|77_aa
MEELDITLVGKKNLVSSPERESIHILSVDEKNKLGAKIIKAEMMGNMELAEQLKVQLEKA
NKFKETITQIPKKSGVE

>gi568815587r:107404661_107660893|GENSCAN_predicted_CDS_1|231_bp
atggaggaactagacataactttagttggaaagaaaaacctggtcagcagtccagagcgt
gagtccattcacatcctgagtgttgatgagaagaacaagttgggagccaagattatcaaa
gcagagatgatggggaatatggaattagctgaacaacttaaagttcaacttgaaaaggca
aataaattcaaagaaactataacacagataccaaaaaaatctggggtagag

>gi568815587r:107404661_107660893|GENSCAN_predicted_peptide_2|576_aa
MRKYSRGWWSHKESGPLDGGEAPSPVSDYPPMGGPLANSVHTCLIYLLYSGVPLLQQLSL
YPTKYSDLAEERKSGVGTNIPSLWNPSDSSEEVVFSQVLKPPLMIPRQTGSGVDLQQTLA
DLQQRGLTVRRKTNKQKGTASTPTKRTSTQKPHLKVTNIKDQSFTMATSMAAASGRFESA
KSIEERKEQTRNARAEVLRQAKANFEKEERRKELKRLRGEDTWMLPDVNERIEQFSQALG
LCNQQVMKPARPASFPSGWQVPPGLRVGPEVPSGTQSSEDEWVEAVPSQTPDKEKAWKVK
DEKSGKDDTQIIKRDEWMTVDFMSVKTVSSSSLKAEKETMRKIEQEKNQALEQSMEIFQS
KLEDAEKAASTKEDYRRERWRKPTYSDKAQNCQESRESDLVKYGNSSRDRYATTDTAKNS
NNEKFIGDEKDKRPGSLETCRRESNPRQNQEFSFGNLRAKFLRPSDDEELSFHSKGRKFE
PLSSSSALVAQGSLCSGFRKPTKNSEERLTSWSRSDGRGDKKHSNQKPSETSTDEHQHVP
EDPREKSQDEVLRDDPPKKEHLRDTKSTFAGYFIIF

>gi568815587r:107404661_107660893|GENSCAN_predicted_CDS_2|1731_bp
atgaggaaatactctagaggctggtggagccacaaggaatctgggcccctggatggtgga
gaagcgccatcacctgtctctgactatcctcctatgggtggaccattagccaacagtgtt
cacacctgtctcatttacctgctgtattctggggttcctctgttacagcagcttagccta
tacccgactaaatacagtgatttagcagaggaaaggaaaagtggtgtgggaacaaatatt
ccatccctgtggaatccgtcagattcatctgaggaagtggtttttagccaagtcttgaaa
cctccgctgatgatacccaggcaaacagggtctggagtggacctccagcaaactctagca
gacctgcagcagaggggcctgactgttagaaggaaaactaacaaacagaaaggaacagca
tcaacaccaacaaaaaggacgtccactcagaaaccccatctgaaggtcaccaatatcaaa
gaccaaagctttacgatggcaacaagtatggcggctgctagtggtagatttgaaagtgcg
aagagtatcgaagagcggaaagaacagacccggaatgccagggccgaggtgttgcgccag
gctaaagccaattttgaaaaagaagaaaggcgtaaagaacttaagcgacttcggggtgag
gatacatggatgctacctgatgtgaatgagagaattgaacagttctcacaggccctgggg
ctctgcaatcagcaggtgatgaagccagccaggcctgcgtctttcccttcagggtggcaa
gttcccccaggcctgagggtgggtccagaggtgccatcagggacccagagctctgaagat
gagtgggttgaggctgttccatcccagactcctgacaaggaaaaagcctggaaagtgaaa
gatgaaaagtcaggaaaagatgacacccaaattatcaagagggatgagtggatgactgtt
gattttatgtctgttaaaactgtgtcatcatcatcactcaaagctgaaaaggaaactatg
aggaaaatagagcaagagaaaaaccaagcgcttgaacagtcaatggaaatatttcagtca
aaattagaagatgctgaaaaagctgcatccacgaaagaagattatagacgggaacggtgg
aggaaacccacatattcagataaagcacaaaattgtcaagaaagtagagaatcagactta
gtaaaatatggtaacagttcaagggatagatatgctacaacagatactgcaaaaaatagc
aataatgaaaaatttattggtgatgaaaaagataagagacctgggtctttagaaacgtgt
agaagagaatctaacccaaggcaaaatcaagagttttcttttggcaatttgagagctaaa
ttcttgagaccctctgatgatgaagaactgtcatttcacagcaagggcagaaaatttgaa
ccacttagttcatcttcagcattggtagctcagggctctttgtgtagtggttttagaaaa
cccaccaagaacagtgaagaaagattaacatcatggagtcgctctgatgggagaggagac
aagaaacattcaaatcaaaagccatcggaaaccagtactgatgaacaccaacatgttcca
gaagacccaagagaaaaatcacaagatgaagtcttgagagatgaccctccaaaaaaagaa
catctacgggatacaaagtctacatttgctgggtattttatcattttttaa

>gi568815587r:107404661_107660893|GENSCAN_predicted_peptide_3|227_aa
MQTFAVSVTALKGGASGVVCSSRWVRGLADFRNEATDPCARGKAQCKGPRGKACDGEPQE
ASVAGAESATVVGDQAWVYHACPEQISLVIHLQTNLAITLSSDIVCTAEQLDVQPVALDH
CPCQWNTMSAESLMRQIWFENSEPNEFLQKPSEMRSATSDLSASQRRNTKQVHLPQFRRR
RFAVTTEHTSGQPATCSSGKPTDVVLKKQLSQLKRKCPGHKSVIYTG

>gi568815587r:107404661_107660893|GENSCAN_predicted_CDS_3|684_bp
atgcagaccttcgcagtgagtgttacagctcttaaaggtggtgcatctggagttgtttgt
tcctcccggtgggttcgtggtctcgctgacttcaggaatgaagccacagacccttgtgcc
agaggaaaagcccagtgcaaaggcccacggggaaaggcctgcgatggagaaccgcaggag
gccagtgtggctggagcagagtcagcgacagtggttggcgaccaggcatgggtctaccat
gcctgccctgagcaaatctccctggtaatacatctgcaaacaaacctggcaattactttg
agttcagatattgtatgcactgctgaacagctagatgtgcagccagtggccttagatcat
tgcccttgtcaatggaacacaatgtcagcagagtctcttatgaggcagatttggtttgaa
aactctgagccaaatgagttcctccaaaagccttctgaaatgagaagtgctacaagtgac
ctctctgcttcccagaggagaaacacaaagcaagtgcacctgccacaattcagaaggagg
aggtttgcagtgaccactgagcatacttctggtcaacctgctacctgctcatctggaaaa
ccaacagatgtggttttaaagaagcaactttcacaattaaaaagaaagtgccctgggcac
aagtctgtgatctatactggctga

>gi568815587r:107404661_107660893|GENSCAN_predicted_peptide_4|743_aa
MACKYPLRCSGARVERLAKKKAHACWYKFAMDSNHQSNYKLSKTEKKFLRKQIKAKHTLL
RHEGIETVSYATQSLVVANGGLGNGVSRNQLLPVLEKCGLVDALLMPPNKPYSFARYRTT
EESKRAYVTLNGKEVVDDLGQKITLYLNFVEKVQWKELRPQALPPGLMVVEEIISSEEEK
MLLESVDWTEDTDNQNSQKSLKHRRVKHFGYEFHYENNNVDKDKPLSGGLPDICESFLEK
WLRKGYIKHKPDQMTINQYEPGQGIPAHIDTHSAFEDEIVSLSLGSEIVMDFKHPDGIAV
PVMLPRRSLLVMTGESRYLWTHGITCRKFDTVQASESLKSGIITSDVGDLTLSKRGLRTS
FTFRKVRQTPCNCSYPLVCDSQRKETPPSFPESDKEASRLEQEYVHQVYEEIAGHFSSTR
HTPWPHIVEFLKALPSGSIVADIGCGNGKYLGINKELYMANEETEALRYGCPNLHSHQQY
ARIPFSPHPQRRLLSFVSLIMARSNKCEIGCDRSQNLVDICRERQFQAFVCDALAVPVRS
GSCDACISIAVIHHFATAERRVAALQEIVRLLRPGGKALIYVWAMEQEYNKQKSKYLRGN
RNSQGKKEEMNSDTSVQRSLVEQMRDMGSRDSASSVPRINDSQEGGCNSRQVSNSKLPVH
VNRTSFYSQDVLVPWHLKGNPDKGKPVEPFGPIGSQDPSPVFHRYYHVFREGELEGACRT
VSDVRILQSYYDQGNWCVILQKA

>gi568815587r:107404661_107660893|GENSCAN_predicted_CDS_4|2232_bp
atggcgtgcaagtatccgctgcggtgttctggtgctagagtggagaggctggcaaagaag
aaggcacacgcatgttggtacaagtttgctatggacagcaaccatcaaagtaattacaaa
ctcagtaaaactgagaagaagttcttaaggaaacagattaaagccaagcatactttgctg
agacatgaaggcattgagacagtatcctatgccactcagagcctggttgttgccaatggt
ggtttgggtaatggtgtgagtcggaaccagctgctcccggttttagagaaatgtggactg
gtggatgctctcttaatgccacctaacaagccgtactcatttgcaagatacagaactaca
gaagaatctaagagagcctatgttaccctcaatggaaaagaagtagtggatgatttagga
caaaagatcactctgtatttgaattttgtggaaaaagtgcagtggaaggagttgaggcct
caagccttaccaccaggactcatggtagtagaagaaataatttcttctgaggaggagaaa
atgcttttggaaagtgttgattggacagaagatacagacaatcaaaactctcaaaaatcc
ttaaaacacagaagagtaaagcattttggttatgagttccactatgagaacaacaatgta
gataaagataagccattatctgggggtcttcctgacatttgtgaaagctttttggagaaa
tggttgaggaaaggttacattaaacataaacctgatcaaatgaccataaatcagtatgaa
cctgggcaaggaattcccgctcatattgatacacattccgcttttgaggatgagatcgtt
tctctcagtttggggtcagagattgtcatggattttaagcacccagatggcattgcagtg
ccagttatgttgcctcgtcggagtttgctggtgatgacaggagaatctagatacctttgg
acccatggaatcacgtgcagaaaatttgatactgttcaagcatctgagagtcttaaaagt
ggaattatcaccagtgatgttggagacttaactttaagcaagaggggactacgaacatca
tttacatttaggaaagtgaggcaaacaccttgtaactgtagttacccgttggtctgtgat
agccagaggaaagagactcccccctcatttccagagagtgataaagaagcctcacggctg
gagcaagagtacgtccatcaggtttatgaagagattgctgggcacttcagcagcacaaga
cataccccttggccgcacattgtggagtttttgaaggctttgccaagtggttcaatagtg
gctgatattggatgtggtaatggaaagtatcttggcatcaataaggagttatatatggca
aatgaggaaacagaggctttgagatatggctgtcctaatttacattcccaccaacagtat
gccaggattcccttttccccacatcctcaacgccgtttgttatcttttgtctctttgata
atggccagatctaacaagtgtgagattggttgtgatcgtagccaaaaccttgtggacatt
tgtagagagaggcaatttcaggcttttgtctgtgatgcattggcagtaccagtccgcagt
gggtcttgtgatgcctgcatctccattgctgttattcatcattttgcaacagcagagcgt
agagtggcagctctccaagaaattgttcgactcctgagaccaggtgggaaggcactcatt
tatgtctgggcaatggaacaagaatataataagcagaagtccaagtatcttagaggaaac
agaaatagccaaggaaagaaagaggagatgaacagtgatacctcagtgcagaggtcactt
gtggagcaaatgcgtgacatgggcagtcgagactcggcatcttctgtcccccgcattaat
gactctcaggaaggaggatgtaattcaaggcaagtttctaattccaagctgcctgttcat
gttaacaggacttctttttattctcaagatgtactggttccctggcaccttaagggaaat
cctgataaaggcaaacctgttgagccatttggtcccataggatcccaggacccaagtcct
gtgtttcatcgttactaccatgtgttccgtgagggagaactggaaggtgcctgcaggact
gtgagtgatgtcagaattctgcaaagctactacgatcaaggaaactggtgtgtgattctt
caaaaggcctga

>gi568815587r:107404661_107660893|GENSCAN_predicted_peptide_5|579_aa
MEMESEKDIGPRNQKIPYWRKVKGFLRMMANVNELRHLSQYKHTTCFPPYWQHQLRTVVK
PPAQNVYIAEMQNNAWMPAQNWSLQMTDSIDSTNLRPTGAPSAVSCHSPLGCPILPARER
DAPILKCGVSQQLEEAQLNSPADRSSQLAARRTPQSGGPAARLPSSSLETEAHKARGHSP
LLPRLLWGRQSPGLWRRRSGYALRGGERRARSRAPRLDRGGRGCRTGCGRGRGGGGAGIW
VAWSGASRDAPGAAGGEEATESSGGGRAEASLGARSGRLLSMPSPGAGGAGAVLGERARH
PVPESGGKGLNLRTPLLWEVAGVAQFNCSRVASLEEPTTGRWSKNFVNAGAQAPLLSEKS
KGVELTSKRWLLLQVPKSKKLMSENRIKVLSYSSLSYVKVDRYPKIRKEEDEHPREKQKL
QQMPSHSQHPSAESASSERSPLKAITSMAFSLETSPYFGVLRAKGVLVMYSMALGPSRRS
RFIKTGELQWRKSNSPEPAVPETRVLLLLKSVSLSIQGSEFLKIIWWADTQAAGRPEDVQ
GSTPAEGHTNRHRQQTQAGRQAFNGQNYAEFGHGGWRRA

>gi568815587r:107404661_107660893|GENSCAN_predicted_CDS_5|1740_bp
atggagatggagagtgagaaagacattggacccaggaatcagaaaatcccatactggaga
aaggtgaaaggatttcttagaatgatggcaaatgttaatgaattaagacatttatcccaa
tacaagcatactacctgctttccaccatattggcagcaccagttaaggacggttgtcaag
ccaccggcacaaaacgtatacattgcagagatgcagaacaatgcctggatgcctgcccaa
aattggtctctccaaatgacagactcaattgatagtaccaatctacggcccactggggcc
ccgtcagctgtcagctgtcactccccactcggctgtccaattctacctgcccgggaaaga
gatgctccaatattgaagtgcggagtttcccagcagttggaggaggcgcagctcaacagc
ccagccgaccgctcctcccagctcgctgcgcggaggaccccacagtccggcggccccgca
gcccggctgcctagctcctccctggagaccgaagcccacaaggcaagggggcattcgccc
ctactccctaggctcctctggggtcgccaatcacctggactctggcggcggcgctccggc
tacgcgctccgcggcggcgagcgacgcgctcggtcccgggcgccgaggctggacaggggc
ggccgcggctgccgcactggctgcgggcgcggaaggggcgggggcggggcaggaatctgg
gtcgcgtggagcggagcaagccgggatgcacccggggcggctggcggcgaggaggcgacc
gagagcagcgggggagggcgtgcagaggcttccctgggagcacgaagcgggcggctactg
agcatgcccagtccgggagccgggggcgcgggcgcggtgctgggggagagagcgcggcac
ccagtgccggaatctggggggaaagggttaaatctgcggaccccgctgctgtgggaggtg
gctggtgtggcccagtttaattgctcccgggtggcctccctggaggagcccacgacagga
agatggtcaaaaaattttgtgaatgctggtgctcaggccccactcctttcagagaagtcc
aagggagttgaattaacatctaaaagatggctgctcctgcaggtacctaagagcaagaaa
ctgatgtcagaaaacaggatcaaagttctgagttactcgagtctctcatatgtgaaagta
gacaggtatcctaaaataagaaaggaggaggacgaacacccaagagaaaaacagaaatta
caacaaatgccatcacactctcaacatcccagtgcagagtcagcttcaagtgagagaagt
cctttgaaggctattacttctatggctttcagtttggagaccagtccctacttcggcgtt
ttgagagcaaaaggtgttctcgtcatgtattccatggctttagggccttctaggcggagc
cgatttatcaagacaggggaattgcaatggagaaagagtaattcaccagagccggctgtg
ccggagaccagagttttattactactcaaatcagtctccctgagcattcagggatcagag
tttttaaagataatttggtgggcagacacacaagcggctggacgtccagaggacgtccag
gggagcacaccggcggaagggcacaccaacagacacaggcagcagacacaggcaggtcgg
caggccttcaacgggcagaactatgcagagtttggccacggcggctggaggagagcctga

>gi568815587r:107404661_107660893|GENSCAN_predicted_peptide_6|215_aa
MKIETSLRDSKSKLFGAMVTSNDESHSLNMTLLKFSIPRLSDCPVRLEQACLLQIVGYRN
LIADVEKLRREAYDSDNPQHEEMLLKLWKFLKPNTPLESRISKQWCEIGFQGDDPKTDFR
GMGLLGLYNLQYFAERDATAAQQVLSDSLHPKCRWHILEEHQSEDTSPPQSLESDNKLAI
FLINHWRGTDFVYESFLKKSFIVVSPVSAIQEKVF

>gi568815587r:107404661_107660893|GENSCAN_predicted_CDS_6|648_bp
atgaaaatcgaaacatcactgagggattctaaaagtaagttgtttggtgctatggtaaca
agtaatgatgaaagtcattcactgaatatgactttattaaagttcagtattcctaggctg
tctgactgtcctgtacgtttggagcaggcttgccttctgcaaatcgttgggtacaggaac
cttattgcagatgtggaaaaactgcgtagagaggcctatgattctgataatccccaacat
gaagaaatgcttttgaagttatggaaattcttgaagcccaatactccactggaatctcgg
atttctaagcagtggtgtgaaattggtttccaaggtgatgatcctaaaacagactttcga
ggaatgggacttctgggactgtacaatttgcagtatttcgcggaaagggatgccacagca
gctcagcaggtcctgtctgactctcttcatccgaaatgcaggtggcatatcctagaggaa
catcagtcagaagacacgagtcctccgcagtccttggaaagtgacaataagctcgcaata
tttctgattaaccactggagggggactgactttgtctatgagtcattcttaaagaaaagc
ttcatagttgtatctcctgtgtcagccatccaagagaaagtattttga