GENSCAN 1.0	Date run:  8-Nov-116	Time: 02:47:32

Sequence gi568815587f:86145230_86378522 : 233293 bp : 39.59% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   4949   5088  140  1  2   30   64   124 0.068   2.54
 1.02 Intr +  13312  13484  173  1  2   26   25   210 0.148   7.16
 1.03 Intr +  16224  16327  104  1  2   98   64    72 0.518   4.77
 1.04 Intr +  17116  17269  154  0  1   74   72    63 0.503   2.02
 1.05 Intr +  20485  20721  237  2  0   22   20   194 0.010   2.66
 1.06 Intr +  38340  38483  144  1  0   41   44   116 0.654   1.83
 1.07 Intr +  39568  39842  275  2  2   21  101   159 0.800   6.83
 1.08 Term +  41066  41461  396  1  0   69   42   181 0.965   5.69
 1.09 PlyA +  41554  41559    6                               1.05

 2.00 Prom +  42414  42453   40                              -7.35
 2.01 Sngl +  49905  50204  300  2  0   71   38   403 0.895  28.64
 2.02 PlyA +  50231  50236    6                              -4.04

 3.00 Prom +  50247  50286   40                             -14.43
 3.01 Sngl +  50356  50973  618  0  0   64   32   383 0.916  26.24
 3.02 PlyA +  51517  51522    6                               1.05

 4.00 Prom +  51686  51725   40                              -3.55
 4.01 Init +  63056  63085   30  1  0   71  101    24 0.598   1.79
 4.02 Intr +  67130  67271  142  1  1   75   39    77 0.836   0.51
 4.03 Intr +  68050  68161  112  2  1   84   59    88 0.530   4.02
 4.04 Term +  68480  68588  109  2  1   90   49    79 0.805   1.20
 4.05 PlyA +  68889  68894    6                               1.05

 5.00 Prom +  85053  85092   40                              -4.75
 5.01 Init + 100001 100114  114  1  0   46  101   132 0.486  10.57
 5.02 Intr + 105067 105219  153  0  0  103   95    66 0.953   8.15
 5.03 Intr + 106919 107011   93  1  0   71   70    48 0.513   0.54
 5.04 Intr + 112286 112367   82  1  1   18  115    63 0.730   0.29
 5.05 Intr + 117040 117123   84  2  0   65   72    56 0.433   0.57
 5.06 Intr + 118943 119034   92  0  2   56   87    86 0.842   4.09
 5.07 Intr + 120854 120987  134  1  2   73   92    30 0.679   0.42
 5.08 Intr + 123227 123332  106  2  1  129   86   -15 0.686   1.70
 5.09 Intr + 131751 131909  159  2  0   95   64   133 0.943  10.86
 5.10 Intr + 132689 132762   74  1  2   45  108    75 0.996   2.49
 5.11 Term + 133170 133296  127  0  1  111   38   150 0.999   9.07
 5.12 PlyA + 133489 133494    6                               1.05

 6.00 Prom + 138099 138138   40                              -8.85
 6.01 Sngl + 139176 139490  315  2  0   83   33   205 0.968  10.20
 6.02 PlyA + 142287 142292    6                               1.05

 7.00 Prom + 142427 142466   40                              -8.85
 7.01 Sngl + 150110 150352  243  1  0  102   42   303 0.773  21.93
 7.02 PlyA + 151427 151432    6                               1.05

 8.03 PlyA - 152317 152312    6                               1.05
 8.02 Term - 157246 157032  215  2  2   72   47   155 0.427   6.21
 8.01 Init - 164418 164112  307  0  1   71   19   172 0.147   6.10
 8.00 Prom - 164472 164433   40                              -6.45

 9.02 PlyA - 164589 164584    6                               1.05
 9.01 Sngl - 166952 166242  711  2  0   53   43   348 0.586  22.77
 9.00 Prom - 177256 177217   40                              -6.05

10.00 Prom + 189448 189487   40                              -5.85
10.01 Init + 192179 192301  123  1  0   90   95   100 0.206  11.12
10.02 Intr + 199374 199492  119  2  2   57   60   122 0.170   4.64
10.03 Term + 210783 210906  124  0  1   84   48    88 0.320   1.28
10.04 PlyA + 211925 211930    6                               1.05

11.05 PlyA - 212368 212363    6                               1.05
11.04 Term - 213340 213182  159  1  0   74   42    75 0.352  -1.54
11.03 Intr - 215098 214879  220  0  1   66   68   116 0.241   4.78
11.02 Intr - 219610 219512   99  0  0   80   70    50 0.084   0.71
11.01 Intr - 230597 230342  256  0  1  109   68    61 0.101   1.78

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -   3630   3435  196  2  1  104   54   128 0.825   6.90


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587f:86145230_86378522|GENSCAN_predicted_peptide_1|540_aa
KRQNQINIVKLGTEHVEERSKREVVEGYAFGEEEEEKEFLQSLASKRNFRSSQETIESGL
FQPDRVKALLSVRACHMQKHEPSCKEVMCQWGVRKYLLRYARQKVLDSWIWAPDLIPDSS
RKTHAKYHGVSDNEQTLSYEMECWFHVLEDTASCQKEDLGLISMCASIQMRLSGLSWMSH
GNGQTSAASWEVGTPNTRSRLDLGDTIQDIGTGKYFMTKMRRAIATKAKIDKWDLIKLKS
FCTAKEAINRVNRPLIEGEKSIANYAFDKEVDVEKRIQAKVVYLVDDPRKPQSESGEARC
RREGADKVCAIKDVTTEVDTSAATSTNSKPSEFLGSFASNLESQAVISGGPRLGHMLVRQ
LPGTQEANRLACFPASIRGRHILPPSMSHAMAVSPDTGRGLRRWAAKKNGFHTKSEEITR
RKCLPREKEPRGSAKNVRLYGGSRYELLSKPDSVVGLRAWLLSRERLSNPTRMISKTALL
ALLTFASALFKEETIYPDAGPLRLHSLARSSQELGRVEDSTFMKPFSHTVPAQPLKMCAL

>gi568815587f:86145230_86378522|GENSCAN_predicted_CDS_1|1623_bp
aaaaggcagaaccagattaacatagtaaaactggggacagagcatgtggaagaaaggagc
aagagggaggtggtagaaggttacgcatttggggaggaagaggaagagaaggaatttttg
cagagccttgcctcaaagaggaattttcgatctagtcaagagacaatagagagtgggctc
ttccaacctgatcgggtaaaagcactgctgtcagtgagggcctgccacatgcaaaaacat
gagccttcctgcaaggaggtgatgtgccagtggggagtaaggaagtacctcctacgatat
gcaagacaaaaagtactggacagctggatttgggctccagatctaatccctgattccagc
aggaaaacacatgcaaaatatcatggagtctcagacaatgagcagactctgtcttatgaa
atggagtgctggttccatgtgctagaagacacagcttcctgccagaaagaggatctgggc
ctcatctccatgtgtgccagcattcagatgcggctgtctgggctttcatggatgagtcat
ggcaatggccagacctcagctgcaagttgggaagtaggaacaccaaacacaagaagcagg
ttggacctaggtgataccattcaggacataggcacgggcaaatatttcatgacaaagatg
cgaagagcaattgcaacaaaagcaaaaattgacaaatgggatctaattaaactaaagagc
ttctgcacagcaaaagaagctatcaacagagtaaacagaccacttatagaaggggagaaa
agtattgcaaactatgcatttgacaaagaagtggacgttgagaaaaggattcaagcaaag
gtagtttatttggtggacgatcctaggaaaccccagtcagaaagtggggaagcgaggtgc
agaagagaaggagccgataaagtgtgtgctatcaaagacgttaccactgaggtggacacc
agtgctgccaccagcacaaattctaaaccgtccgagtttcttgggtcatttgcttcaaac
ttagagtctcaggcagtaatatcaggggggccaagattaggtcatatgcttgtgcgccag
ctgccagggacccaggaggccaaccgtctggcctgttttccagcttccatcaggggaaga
cacattctacctcccagcatgtctcatgcaatggcagtttccccagacacaggaaggggg
ctcagacgctgggcagccaagaagaatgggtttcatacaaagagtgaggagattacaaga
aggaaatgtcttccaagagagaaagaacccagaggttctgccaaaaatgtgagactatat
gggggaagcagatatgagctactttcaaagcctgactccgtggtgggactgagagcctgg
ctcctgagtcgagagaggctttccaatcccacaagaatgatttcaaaaacagccctcttg
gcattactgacatttgcctctgcccttttcaaggaggaaacaatttacccagatgcaggc
ccgcttaggctccattctctagcaagatcaagccaagaacttggaagggtggaggacagc
acattcatgaagccattttcacatactgttcctgcacagcctttgaaaatgtgtgccttg
taa

>gi568815587f:86145230_86378522|GENSCAN_predicted_peptide_2|99_aa
MAATEGVGEAAQGGEPRQLEQPPPQPHPPLPQEQHEEEMAAEAGEAVASPMDDGFLSLDS
PSYVPYRDRTEWADTDPVPQNDGPNPVVQIIYSDKFRDV

>gi568815587f:86145230_86378522|GENSCAN_predicted_CDS_2|300_bp
atggcggccaccgagggggtcggggaggctgcgcaaggcggtgagccccggcagctggag
cagcccccgccccagccgcacccaccgctgccccaggagcagcacgaggaagagatggca
gcagaggctggggaagccgtggcgtcccccatggacgacgggtttctgagcctggattcg
ccctcctatgtcccgtacagggacagaacagaatgggctgatacagatccagtgccgcag
aatgatggccccaatcccgtggtccagatcatttatagtgacaaatttagagatgtttga

>gi568815587f:86145230_86378522|GENSCAN_predicted_peptide_3|205_aa
MNYITEIIEGQPKNYLVCHNRRVIVEWLRDPSQEPEFIDNILNQDAKNYHAWQHRQWVIQ
EFKLWDNELQYVDQLLKEDVRNNSVWNRRYFVISNTTGYNDCAVLEREVQYTLEMIQLVP
HNSSWNYLKGILQDRGLSKYPNLLNQLLDLQPSHSSPYLIAFLVGIYEDMLENQCVNKED
ILNNALGLCEILAKEKDMIRKEYWR

>gi568815587f:86145230_86378522|GENSCAN_predicted_CDS_3|618_bp
atgaactacatcactgaaataattgaggggcagcccaaaaactatctagtttgtcacaat
aggcgagtaatagtggaatggctaagagatccatctcaggagcctgaatttattgataat
attcttaatcaggatgcaaagaattatcatgcctggcagcatcgacaatgggttattcag
gaatttaaactttgggataatgagctgcagtatgtggaccaacttctcaaagaggatgtg
agaaataactctgtctggaaccgaagatattttgttatttccaacaccactggctacaat
gattgtgctgtattggagagagaagtccaatacactctggaaatgattcaactagtacca
cataatagttcatggaactatttgaaaggaattttgcaggatcgtggtctttccaaatat
cctaatctgttaaatcaattacttgatttacaaccaagtcatagttccccctacctaatt
gcctttcttgtgggtatctatgaagacatgctagaaaaccagtgtgtcaataaggaagac
attcttaataatgcattagggttatgtgaaatcctagctaaagaaaaggacatgataaga
aaggaatattggagataa

>gi568815587f:86145230_86378522|GENSCAN_predicted_peptide_4|130_aa
MVNITNYQENRRELTLRRCKVQDHMTHGQKHQDVDLALSSFKAQAFFLILYHLLGWILPG
FYVHEILTVPLGESMARYAGSGGRSRAVTLPLTSRAHSLSKQGDAVEEKKPELNGAVLNP
KTREYHWEQQ

>gi568815587f:86145230_86378522|GENSCAN_predicted_CDS_4|393_bp
atggtcaacatcactaattatcaggaaaatagaagggagctgacactccgaaggtgcaaa
gtccaagatcatatgactcatggacagaagcaccaagatgtggacctagctttgtcttcc
ttcaaagcccaggcctttttcctcatactataccatctcttgggttggatcttgccaggg
ttctatgtgcatgaaatcttgactgtccctcttggggagtccatggcaagatatgctgga
agcggcggaaggtccagggcagtgactctgcctctaacctctagggcacacagcctcagc
aagcagggcgatgcggtcgaagaaaagaagccagaactcaatggggcagtgttgaacccc
aaaaccagagaataccactgggagcaacagtag

>gi568815587f:86145230_86378522|GENSCAN_predicted_peptide_5|405_aa
MSEREVSTAPAGTDMPAAKKQKLSSDENSNPDLSGDENDDAVSIESGTNTERPDTPTNTP
NAPGRKSWGKGKWKSKKCKYSFKCVNSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNR
HYVGHGNAINELKFHPRDPNLLLSVSKDHFSFYDKQPEEAMHHCECFDAQIFLLPDHALR
LWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKE
SYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKSCENAIVCWKPGKM
EDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDP
HKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR

>gi568815587f:86145230_86378522|GENSCAN_predicted_CDS_5|1218_bp
atgtccgagagggaagtgtcgactgcgccggcgggaacagacatgcctgcggccaagaag
cagaagctgagcagtgacgagaacagcaatccagacctctctggagacgagaatgatgac
gctgtcagtatagaaagtggtacaaacactgaacgccctgatacacctacaaacacgcca
aatgcacctggaaggaaaagttggggaaagggaaaatggaagtcaaagaaatgcaaatat
tctttcaaatgtgtaaatagtctcaaggaagatcataaccaaccattgtttggagttcag
tttaactggcacagtaaagaaggagatccattagtgtttgcaactgtaggaagcaacaga
cactatgttggccatggaaatgctatcaatgagctgaaattccatccaagagatccaaat
cttctcctgtcagtaagtaaagatcatttctcattttatgataagcagccagaagaagcc
atgcatcactgtgaatgctttgatgctcagatatttcttctgccagatcatgctttacga
ttatggaatatccagacggacactctggtggcaatatttggaggcgtagaagggcacaga
gatgaagttctaagtgctgattatgatcttttgggtgaaaaaataatgtcctgtggtatg
gatcattctcttaaactttggaggatcaattcaaagagaatgatgaatgcaattaaggaa
tcttatgattataatccaaataaaactaacaggccatttatttctcagaaaatccatttt
cctgatttttctaccagagacatacataggaattatgttgattgtgtgcgatggttaggc
gatttgatactttctaagtcttgtgaaaatgccattgtgtgctggaaacctggcaagatg
gaagatgatatagataaaattaaacccagtgaatctaatgtgactattcttgggcgattt
gattacagccagtgtgacatttggtacatgaggttttctatggatttctggcaaaagatg
cttgcattgggcaatcaagttggcaaactttatgtttgggatttagaagtagaagatcct
cataaagccaaatgtacaacactgactcatcataaatgtggtgctgctattcgacaaacc
agttttagcagggatagcagcattcttatagctgtttgtgatgatgccagtatttggcgc
tgggatcgacttcgataa

>gi568815587f:86145230_86378522|GENSCAN_predicted_peptide_6|104_aa
MDLISFLDYNCTLDSEGSFGSAHLADLPSNSKVDKTCSEVLSTPTLNVHSGQKYALCPKG
TKVMMTYARAWVKDTVRILGFQNKVFLEPPVLHEAYVQLVVKEM

>gi568815587f:86145230_86378522|GENSCAN_predicted_CDS_6|315_bp
atggacctcatttccttcctggattacaactgcaccttggacagtgagggctcttttgga
agtgcacacctagctgacctgccctccaactcaaaagtggacaagacctgttcagaggtg
ttaagcacccccacactcaatgtccattcaggccaaaagtatgctctttgccccaaggga
accaaagtcatgatgacatatgccagagcttgggtaaaggatacagtgaggattcttgga
tttcagaacaaagtattcctggagccccctgtacttcatgaagcctatgtccagcttgtt
gtcaaagaaatgtag

>gi568815587f:86145230_86378522|GENSCAN_predicted_peptide_7|80_aa
MGNQRASSPGLLAILMQVQMNEERSSKMVFGQINYSITWFPIMDDEEGEGEKEDEDRDED
EGEDKGDEGEEGEEDEGEDD

>gi568815587f:86145230_86378522|GENSCAN_predicted_CDS_7|243_bp
atggggaaccagagagcttcttcacctggcttactggccattctgatgcaggtgcagatg
aatgaggaaaggtcatcaaagatggtatttggccaaatcaattacagtattacttggttc
ccaataatggatgatgaggaaggagaaggagaaaaagaagatgaagacagggatgaggat
gaaggtgaagataaaggtgatgaaggggaggaaggagaggaagatgaaggagaagatgac
taa

>gi568815587f:86145230_86378522|GENSCAN_predicted_peptide_8|173_aa
MGKEFMTKTPKAMATKAKIDKWDLIKLKNFCTAKETTIRVNRQPTEWEKIFAIYPSDKGL
ISRIYKELKQIYKKKIKQPHQKVDNGYEHTLLKRRHVCSQQTPSPPPSSQTWRRQLRSAG
SDLKPATRSPGATALVETKNLPEFAGGCLPLHYIVTGPAARMPLPPRTLTFSS

>gi568815587f:86145230_86378522|GENSCAN_predicted_CDS_8|522_bp
atgggcaaggaattcatgactaaaacaccaaaagcaatggcaacaaaagccaaaattgac
aaatgggatctaattaaactaaagaacttctgcacagcaaaagaaactaccatcagagtg
aacaggcaacccacagaatgggagaaaatttttgcaatctacccatctgacaaagggcta
atatccagaatctacaaagaacttaaacaaatttacaagaaaaaaatcaaacagccccat
caaaaagtggacaacggatatgaacacacacttctcaaaagaagacatgtatgtagccaa
cagacaccctccccgccaccaagcagccaaacatggcgacggcagctccgttcagccggc
agtgacctgaagccggcgactaggagtcctggggctactgccctagtcgagactaagaac
cttccagaatttgcgggagggtgtctgcccctccactacatagtgactgggccagcggca
agaatgcctctgcccccgcgaactctgaccttctcttcctaa

>gi568815587f:86145230_86378522|GENSCAN_predicted_peptide_9|236_aa
MIMGDFNTPLSTLDRSTRQKVNKDIQELNSALHQADLIDIYRTLHTKSTEYTFFSAPHRT
YSKIDHIVGGKALLSKCKRKKIITNCLSDHRAFKLELRIKKRTQNRSTTRKLNNLLLNDY
WVHNEMKAEIKMFFETNKNKDTAYQKLWDTFKAVCRGKFIALNAHKRKQERSTIDTLTSQ
LKELEKQEQTHSKASRRQEIAKIRAELKEIETEKTLQKINESRSWFFERSTKYIDH

>gi568815587f:86145230_86378522|GENSCAN_predicted_CDS_9|711_bp
atgataatgggagactttaacaccccactgtcaacattagacagatcaacgagacagaaa
gttaacaaggatatccaggaacttaactcagctctgcaccaagcagacctaatagacatc
tacagaactctccacaccaaatcaacagaatatacattcttctcagcaccacatcgcact
tattccaaaattgaccacatagttggaggtaaagcactcctcagcaaatgtaaaagaaaa
aaaattataacaaactgtctctcagaccacagggcattcaaactagaactcaggattaag
aaacgcactcaaaaccgctcaactacaaggaaattgaacaatctgctcctgaacgactac
tgggtacataatgaaatgaaagcagaaataaagatgttctttgaaaccaataagaataaa
gacacagcataccagaaactctgggacacattcaaagcagtgtgtagagggaaatttata
gcactaaatgcccacaagagaaagcaggaaagatctacaattgacaccctaacgtcacaa
ttaaaagaactagagaagcaagagcaaacacattcaaaagctagcagaaggcaagaaata
gctaagatcagagcagaactgaaggagatagagacagaaaaaacccttcagaaaatcaat
gaatccaggagctggttttttgaaagatcaacaaaatacatagaccactag

>gi568815587f:86145230_86378522|GENSCAN_predicted_peptide_10|121_aa
MNIVRTPSVAQIGISVELLDSMAQQTPVGNAAVSSVDSFTQFTQKMLDNFYNFASSFAVS
QAQMTPSPSEMFIPANVVLKCQILSSEEARAEVAADLYGFVTVTKWFAYVIMIILNNDKP
K

>gi568815587f:86145230_86378522|GENSCAN_predicted_CDS_10|366_bp
atgaatattgtccgaactccatctgttgctcagattggaatttcagtggaattattagac
agtatggctcagcagactcctgtaggtaatgctgctgtatcctcagttgactcattcact
cagttcacacaaaagatgttggacaatttctacaattttgcttcatcatttgctgtctct
caggcccagatgacaccaagcccatctgaaatgttcattccggcaaatgtggttctgaaa
tgtcaaattctttcttctgaggaggcaagagctgaggttgctgcagacctgtatggattc
gtcactgtaacaaaatggtttgcttatgtgataatgattattctcaataatgacaagccc
aaatga

>gi568815587f:86145230_86378522|GENSCAN_predicted_peptide_11|244_aa
XRSQPHFGVTLLQTMLKTDLVLLLTKPNEFSLRRCQVPFQSTYPVAFYDHLIFLIQRHDV
KGNKINRLCMNSQKEPFRVPASLFSRVKNKMGIFTTTAVIHHYAVGPREFYKTRKRNRRS
TLCVILVGLPFLVTTFHYQSRRKQILALLDSAGPGARYVTQYQSSDALSGAQTVELLTGR
QQENVEVISTGMERPTLINGVAVLSPLYFLNKLAFTLHCGLALNSFLHDIQEPSLGVWIG
TPLL

>gi568815587f:86145230_86378522|GENSCAN_predicted_CDS_11|735_bp
nacagatctcagcctcactttggggtgactcttctacaaacgatgctaaaaacagatctt
gtcttgctactaaccaagcctaatgagttttctctgagaaggtgccaggtccccttccaa
agtacttaccctgtagctttttatgatcatctcattttcttaatacaacggcatgatgtc
aaaggcaacaaaatcaaccgtctttgcatgaactctcaaaaggagccatttagggtccct
gcatctcttttctctagagtcaagaataagatggggatctttactaccacagctgttatt
catcattatgctgtaggcccaagagagttctacaagacaagaaagagaaatagaagatct
acattgtgtgtaatcttagtggggctgccattcctggtgactacattccattaccaaagc
cgaaggaaacagatccttgccctccttgactctgcaggaccaggggccaggtatgtgacc
caatatcagtcatcagatgctctttctggggctcagactgttgagctgttgacaggcaga
cagcaggaaaatgtggaagttatttccacagggatggaacgtcctactcttatcaatgga
gtagctgttctttcaccactttattttcttaataaacttgcttttactttgcactgtgga
ctcgccctgaattctttcttgcatgatatccaagaaccctctcttggggtctggattggg
acccctctcctgtaa