GENSCAN 1.0 Date run: 3-Nov-116 Time: 19:36:55 Sequence gi568815587f:61212700_61241226 : 28527 bp : 49.58% C+G : Isochore 2 (43 - 51 C+G%) Parameter matrix: HumanIso.smat Predicted genes/exons: Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr.. ----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------ 1.01 Term + 5587 5747 161 2 2 126 38 52 0.688 2.10 1.02 PlyA + 7663 7668 6 1.05 2.00 Prom + 9613 9652 40 -0.76 2.01 Init + 9702 9757 56 2 2 90 89 128 0.999 11.93 2.02 Intr + 10244 10406 163 2 1 96 76 231 0.956 22.68 2.03 Intr + 12640 12757 118 0 1 87 92 213 0.984 21.64 2.04 Intr + 13627 13745 119 2 2 83 80 273 0.999 26.18 2.05 Intr + 14421 14620 200 2 2 73 96 247 0.999 22.15 2.06 Intr + 15972 16088 117 0 0 102 94 162 0.612 17.78 2.07 Intr + 17220 17364 145 0 1 75 86 300 0.987 28.78 2.08 Intr + 17467 17565 99 0 0 114 94 232 0.999 26.71 2.09 Intr + 18683 18808 126 1 0 95 57 145 0.296 12.98 2.10 Intr + 20291 20375 85 1 1 25 72 71 0.218 -1.41 2.11 Term + 24416 24576 161 0 2 126 38 52 0.536 2.10 2.12 PlyA + 26489 26494 6 1.05 Suboptimal exons with probability > 0.800 Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr.. ----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------ Predicted peptide sequence(s): Predicted coding sequence(s): >gi568815587f:61212700_61241226|GENSCAN_predicted_peptide_1|53_aa XHSHYLSRKTTSRALKWSQKREEQEAIRWILFELSTRFPVLFSIADEKLTHIE >gi568815587f:61212700_61241226|GENSCAN_predicted_CDS_1|162_bp natcactcacattacctgagcagaaaaacaactagcagagcactgaaatggtcccaaaag agggaagagcaagaggcaatcaggtggatccttttcgagttatcaacaaggtttccagtc ctgttttctattgctgatgagaagttaacacacattgaatga >gi568815587f:61212700_61241226|GENSCAN_predicted_peptide_2|462_aa MKWLLLLGLVALSECIMYKVPLIRKKSLRRTLSERGLLKDFLKKHNLNPARKYFPQWEAP TLVDEQPLENYLDMEYFGTIGIGTPAQDFTVVFDTGSSNLWVPSVYCSSLACTNHNRFNP EDSSTYQSTSETVSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLYYAPFD GILGLAYPSISSSGATPVFDNIWNQGLVSQDLFSVYLSADDQSGSVVIFGGIDSSYYTGS LNWVPVTVEGYWQITVDSITMNGEAIACAEGCQAIVDTGTSLLTGPTSPIANIQSDIGAS ENSDGDMVVSCSAISSLPDIVFTINGVQYPVPPSAYILQSEGSCISGFQGMNLPTESGEL WILGDVFIRQYFTVFDRANNQLLLLVTADPGFLLKTQAQRLELGSRKGGDHSHYLSRKTT SRALKWSQKREEQEAIRWILFELSTRFPVLFSIADEKLTHIE >gi568815587f:61212700_61241226|GENSCAN_predicted_CDS_2|1389_bp atgaagtggctgctgctgctgggtctggtggcgctctctgagtgcatcatgtacaaggtc cccctcatcagaaagaagtccttgaggcgcaccctgtccgagcgtggcctgctgaaggac ttcctgaagaagcacaacctcaacccagccagaaagtacttcccccagtgggaggctccc accctggtagatgaacagcccctggagaactacctggatatggagtacttcggcactatc ggcatcggaactcctgcccaggatttcaccgtcgtctttgacaccggctcctccaacctg tgggtgccctcagtctactgctccagtcttgcctgcaccaaccacaaccgcttcaaccct gaggattcttccacctaccagtccaccagcgagacagtctccatcacctacggcaccggc agcatgacaggcatcctcggatacgacactgtccaggttggaggcatctctgacaccaat cagatcttcggcctgagcgagacggaacctggctccttcctgtattatgctcccttcgat ggcatcctggggctggcctaccccagcatttcctcctccggggccacacccgtctttgac aacatctggaaccagggcctggtttctcaggacctcttctctgtctacctcagcgccgat gaccagagtggcagcgtggtgatctttggtggcattgactcttcttactacactggaagt ctgaactgggtgcctgttaccgtcgagggttactggcagatcaccgtggacagcatcacc atgaacggagaggccatcgcctgcgctgagggctgccaggccattgttgacaccggcacc tctctgctgaccggcccaaccagccccattgccaacatccagagcgacatcggagccagc gagaactcagatggcgacatggtggtcagctgctcagccatcagcagcctgcccgacatc gtcttcaccatcaatggagtccagtaccccgtgccacccagtgcctacatcctgcagagc gaggggagctgcatcagtggcttccagggcatgaacctccccaccgaatctggagagctt tggatcctgggtgatgtcttcatccgccagtactttaccgtcttcgacagggcaaacaac cagctcctgcttctggtgacagccgacccaggctttctgctgaagacacaagcccagagg ctggagctgggctctaggaagggcggggatcactcacattacctgagcagaaaaacaact agcagagcactgaaatggtcccaaaagagggaagagcaagaggcaatcaggtggatcctt ttcgagttatcaacaaggtttccagtcctgttttctattgctgatgagaagttaacacac attgaatga