GENSCAN 1.0	Date run:  3-Nov-116	Time: 19:36:56

Sequence gi568815587f:61103565_61222400 : 118836 bp : 49.76% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -   2111   2106    6                               1.05
 1.03 Term -   5454   5355  100  2  1   90   44    74 0.224   0.80
 1.02 Intr -   7390   7216  175  2  1   84   50   235 0.613  18.30
 1.01 Init -   8910   8862   49  0  1   77   58    25 0.753  -2.49
 1.00 Prom -  10549  10510   40                              -6.16

 2.00 Prom +  12661  12700   40                              -3.06
 2.01 Init +  14122  14170   49  0  1   86   58    18 0.287  -2.29
 2.02 Intr +  14611  14916  306  2  0  105   80   224 0.971  19.72
 2.03 Intr +  15336  15413   78  1  0   94  110    57 0.929   8.02
 2.04 Intr +  15670  16011  342  2  0  115  111   245 0.970  24.90
 2.05 Intr +  18047  18340  294  0  0  112   84   334 0.988  32.38
 2.06 Intr +  19343  19468  126  0  0  145   51   236 0.999  26.25
 2.07 Intr +  20320  20373   54  2  0   80   98    82 0.994   7.35
 2.08 Intr +  21468  21587  120  1  0   44  115    67 0.378   5.47
 2.09 Term +  22187  22275   89  0  2   82   43    54 0.284  -1.88
 2.10 PlyA +  24183  24188    6                               1.05

 3.09 PlyA -  24854  24849    6                              -0.45
 3.08 Term -  25695  25612   84  0  0  135   48     4 0.249  -1.25
 3.07 Intr -  28225  28100  126  1  0   78   46   106 0.686   6.28
 3.06 Intr -  28975  28790  186  1  0  109   78   182 0.686  19.19
 3.05 Intr -  29773  29691   83  2  2   86   78    82 0.925   6.36
 3.04 Intr -  30643  30472  172  1  1   87   45   301 0.963  25.22
 3.03 Intr -  35271  35173   99  0  0   89   65   159 0.539  14.01
 3.02 Intr -  42003  41856  148  2  1   30   64    89 0.236   0.94
 3.01 Init -  47649  47567   83  0  2   59   51    85 0.110   2.34
 3.00 Prom -  49714  49675   40                              -5.76

 4.00 Prom +  55474  55513   40                              -7.36
 4.01 Init +  57714  58114  401  2  2   88  111   221 0.772  18.54
 4.02 Intr +  71601  71828  228  0  0   58   75   110 0.046   3.68
 4.03 Intr +  82933  83016   84  1  0   91   77    30 0.151   1.14
 4.04 Term +  91315  91426  112  1  1   94   49    62 0.299   0.93
 4.05 PlyA +  92963  92968    6                               1.05

 5.00 Prom +  99912  99951   40                              -0.76
 5.01 Init + 100001 100056   56  1  2   90   89   113 0.999  10.42
 5.02 Intr + 100543 100705  163  1  1   96   76   250 0.950  24.58
 5.03 Intr + 102946 103063  118  0  1   87   92   213 0.984  21.64
 5.04 Intr + 103933 104051  119  2  2   83   80   273 0.999  26.18
 5.05 Intr + 104727 104926  200  2  2   73   96   247 0.999  22.15
 5.06 Intr + 106278 106394  117  0  0  102   94   162 0.612  17.78
 5.07 Intr + 107526 107670  145  0  1   75   86   300 0.987  28.78
 5.08 Intr + 107773 107871   99  0  0  114   94   232 0.999  26.71
 5.09 Intr + 108989 109114  126  1  0   95   57   145 0.295  12.98
 5.10 Intr + 110597 110681   85  1  1   25   72    71 0.217  -1.41
 5.11 Term + 114722 114882  161  0  2  126   38    52 0.533   2.10
 5.12 PlyA + 116798 116803    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587f:61103565_61222400|GENSCAN_predicted_peptide_1|107_aa
MRFHHVGQAGLELLTSDEQQFLSSPSISITVTIIITITVTIIITITVTITNTLKVFTLPG
LLHINSPSPHHSAMKSCRPCTLGNGGKGVACLGFGRHPDSQACDNDR

>gi568815587f:61103565_61222400|GENSCAN_predicted_CDS_1|324_bp
atgaggtttcaccatgttggccaggctggtcttgaactcctgacctcagatgagcagcag
ttcctctcctctccttccatctctatcaccgtcaccatcatcatcaccatcaccgtcacc
atcatcatcaccatcactgtcaccatcaccaacactttaaaagttttcactcttccgggc
cttttacacattaactctcccagtcctcaccacagtgctatgaagtcctgccgcccctgc
accctgggaaatggaggcaagggtgtggcctgcttagggtttggcaggcacccggattca
caggcctgtgataatgaccgatga

>gi568815587f:61103565_61222400|GENSCAN_predicted_peptide_2|485_aa
MGFHHVGQAGLKLLTSDFQARLTRSNSKCQGQLEVYLKDGWHMVCSQSWGRSSKQWEDPS
QASKVCQRLNCGVPLSLGPFLVTYTPQSSIICYGQLGSFSNCSHSRNDMCHSLGLTCLEC
LIAEPQKTTPPTTRPPPTTTPEPTAPPRLQLVAQSGGQHCAGVVEFYSGSLGGTISYEAQ
DKTQDLENFLCNNLQCGSFLKHLPETEAGRAQDPGEPREHQPLPIQWKIQNSSCTSLEHC
FRKIKPQKSGRVLALLCSGFQPKVQSRLVGGSSICEGTVEVRQGAQWAALCDSSSARSSL
RWEEVCREQQCGSVNSYRVLDAGDPTSRGLFCPHQKLSQCHELWERNSYCKKVFVTCQDP
NPAGLAAGTVASIILALVLLVVLLVVCGPLAYKKLVKKFRQKKQRQWIGPTGMNQNMSFH
RNHTATVRSHAENPTASHVDNEYSQPPRNSHLSAYPALEGALHRSSMQPDNSSDSDYDLH
GAQRL

>gi568815587f:61103565_61222400|GENSCAN_predicted_CDS_2|1458_bp
atggggtttcaccatgttggccaggctggtctcaaactcctgacctcagatttccaggca
aggctcacccgttccaactcgaagtgccagggccagctggaggtctacctcaaggacgga
tggcacatggtttgcagccagagctggggccggagctccaagcagtgggaggaccccagt
caagcgtcaaaagtctgccagcggctgaactgtggggtgcccttaagccttggccccttc
cttgtcacctacacacctcagagctcaatcatctgctacggacaactgggctccttctcc
aactgcagccacagcagaaatgacatgtgtcactctctgggcctgacctgcttagagtgt
ctcattgcagaaccccagaagacaacacctccaacgacaaggcccccgcccaccacaact
ccagagcccacagctcctcccaggctgcagctggtggcacagtctggcggccagcactgt
gccggcgtggtggagttctacagcggcagcctggggggtaccatcagctatgaggcccag
gacaagacccaggacctggagaacttcctctgcaacaacctccagtgtggctccttcttg
aagcatctgccagagactgaggcaggcagagcccaagacccaggggagccacgggaacac
cagcccttgccaatccaatggaagatccagaactcaagctgtacctccctggagcattgc
ttcaggaaaatcaagccccagaaaagtggccgagttcttgccctcctttgctcaggtttc
cagcccaaggtgcagagccgtctggtggggggcagcagcatctgtgaaggcaccgtggag
gtgcgccagggggctcagtgggcagccctgtgtgacagctcttcagccaggagctcgctg
cggtgggaggaggtgtgccgggagcagcagtgtggcagcgtcaactcctatcgagtgctg
gacgctggtgacccaacatcccgggggctcttctgtccccatcagaagctgtcccagtgc
cacgaactttgggagagaaattcctactgcaagaaggtgtttgtcacatgccaggatcca
aaccccgcaggcctggccgcaggcacggtggcaagcatcatcctggccctggtgctcctg
gtggtgctgctggtcgtgtgcggcccccttgcctacaagaagctagtgaagaaattccgc
cagaagaagcagcgccagtggattggcccaacgggaatgaaccaaaacatgtctttccat
cgcaaccacacggcaaccgtccgatcccatgctgagaaccccacagcctcccacgtggat
aacgaatacagccaacctcccaggaactcccacctgtcagcttatccagctctggaaggg
gctctgcatcgctcctccatgcagcctgacaactcctccgacagtgactatgatctgcat
ggggctcagaggctgtaa

>gi568815587f:61103565_61222400|GENSCAN_predicted_peptide_3|326_aa
MTIDEVGPQSQAWCSVDVDRLDRGSRAHLADGSEEQVMAVALVRERDLSFPGVGDAVVNP
TRWHLPAQPEMLYEGGEGRMETLKDKTLQELEELQNDSEAIDQLALESPEVQDLQLEREM
ALATNRSLAERNLEFQGPLEISRSNLSDRYQELRKLVERCQEQKAKLEKFSSALQPGTLL
DLLQVEGMKIEEESEAMAEKFLEGEVPLETFLENFSSMRMLSHLRRVRVEKLQEVVRKPR
ASQELAGDAPPPRPPPPSHPRSTFGPAIAEIRGSTGSGVGAPCGLASAPRGLGGTRHWAV
SKAEDTGHQGQLEAIWLCRKRLQISL

>gi568815587f:61103565_61222400|GENSCAN_predicted_CDS_3|981_bp
atgaccattgatgaagttggtccccagagccaggcctggtgttctgtggatgtagataga
cttgatcgaggcagccgagcacacctcgctgatggctctgaggagcaggtgatggctgtg
gcattggtgagagaaagggacctgtcatttccaggggtgggtgatgctgtggtaaacccc
acaaggtggcacttgcctgcccagcctgagatgctgtatgagggcggtgagggaaggatg
gagacgctgaaggataagaccctgcaggagctggaggagttgcagaatgactcggaggcg
attgaccagctggccctggagtcccctgaggtccaggacctacagctggaacgggagatg
gcactggccaccaaccggagcctggcagagcggaacttggagttccagggtcccctggag
atcagccgctcaaacctctcggatagataccaggagctccggaagctcgtggagcggtgc
caggagcagaaggcaaagctggagaaattttcttcagcactgcagccagggaccttgtta
gaccttctgcaggtggaaggcatgaagatcgaagaagagtccgaggccatggctgagaag
ttcctggagggcgaggtgcccctggaaacgttcctggagaatttttcctccatgaggatg
ctgtcccacctgcgccgggttcgcgtggaaaagctccaggaagtggtgaggaagcccagg
gcttcccaggagctggccggcgatgcccctccaccccgtccaccacccccgtcccaccca
cgctcaacctttggcccagccatcgccgagattcgagggtcaactggaagtggcgttggt
gctccctgtggacttgcgtcggcacccagaggccttggagggacaaggcactgggcggtg
tccaaggctgaggacacaggacatcagggacagctggaagcaatttggctttgtaggaag
aggctgcaaatctccctctag

>gi568815587f:61103565_61222400|GENSCAN_predicted_peptide_4|274_aa
MRRAGGGAPGATAGAAPTVVLCPARLRQSRDPPQSPLTCQGRRRRRHRGLNRSRAHTSGV
RQARPLPDVTPLQRPAPQWRACSPRDPVGRPASRASELPRHRATHTRSRPPGPQPRERPR
DPSSARRTPRPRPRRGCPHCVWQLPILLSCCHKMAGLATELEPDLRRKRKELQLWHLQTP
ESDLRKLAAGTAIEHSLTFPFSELPKPMPSHLKSHDPSLAERTSMLDFLHVNSVTLPINE
NFIPDSQPGCLMLNHSLNIYTAPGPDLCKNEMLP

>gi568815587f:61103565_61222400|GENSCAN_predicted_CDS_4|825_bp
atgaggcgggcaggcgggggcgctccgggagccacggccggcgccgcccccaccgtcgtc
ctctgccccgcccgcctgcggcagagccgggaccctccccagtctccgctcacctgccag
ggccgccgtcgccgccgccaccgcgggttaaaccgcagccgcgcccacacttccggggtc
cgccaggcccgccccctaccggatgtgacccccttgcaacgtccggcgccccagtggcgc
gcgtgctcgccccgcgaccccgttggccgccccgcctcgcgcgcctctgagttaccacga
catcgtgccacacacacacgctcgcggccgcccgggccacaaccacgggagcgcccacga
gacccctccagcgctcgccgcacgcctcggccccgcccccgccggggctgcccccactgt
gtctggcagcttccaatattgctttcctgctgccataagatggcaggtctggcaacagaa
ctggagccggacttaaggagaaagaggaaggaacttcagctctggcacctgcagaccccc
gaaagtgacctacggaagctggcagcagggactgcaattgagcattctctcacctttccc
ttctcagagctccccaagcctatgcccagccatcttaagtcacatgaccccagtcttgct
gagcgcacatcaatgttagactttctgcatgtgaacagtgtgacattgcccatcaatgaa
aacttcatacctgacagtcagcctggatgcttaatgctcaaccattcactcaacatctac
actgccccaggtccagatctttgtaaaaatgagatgctcccctag

>gi568815587f:61103565_61222400|GENSCAN_predicted_peptide_5|462_aa
MKWLLLLGLVALSECIMYKVPLIRKKSLRRTLSERGLLKDFLKKHNLNPARKYFPQWKAP
TLVDEQPLENYLDMEYFGTIGIGTPAQDFTVVFDTGSSNLWVPSVYCSSLACTNHNRFNP
EDSSTYQSTSETVSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLYYAPFD
GILGLAYPSISSSGATPVFDNIWNQGLVSQDLFSVYLSADDQSGSVVIFGGIDSSYYTGS
LNWVPVTVEGYWQITVDSITMNGEAIACAEGCQAIVDTGTSLLTGPTSPIANIQSDIGAS
ENSDGDMVVSCSAISSLPDIVFTINGVQYPVPPSAYILQSEGSCISGFQGMNLPTESGEL
WILGDVFIRQYFTVFDRANNQLLLLVTADPGFLLKTQAQRLELGSRKGGDHSHYLSRKTT
SRALKWSQKREEQEAIRWILFELSTRFPVLFSIADEKLTHIE

>gi568815587f:61103565_61222400|GENSCAN_predicted_CDS_5|1389_bp
atgaagtggctgctgctgctgggtctggtggcactctctgagtgcatcatgtacaaggtc
cccctcatcagaaagaagtccttgaggcgcaccctgtccgagcgtggcctgctgaaggac
ttcctgaagaagcacaacctcaacccagccagaaagtacttcccccagtggaaggctccc
accctggtagatgaacagcccctggagaactacctggatatggagtacttcggcactatc
ggcatcggaactcctgcccaggatttcaccgtcgtctttgacaccggctcctccaacctg
tgggtgccctcagtctactgctccagtcttgcctgcaccaaccacaaccgcttcaaccct
gaggattcttccacctaccagtccaccagcgagacagtctccatcacctacggcaccggc
agcatgacaggcatcctcggatacgacactgtccaggttggaggcatctctgacaccaat
cagatcttcggcctgagcgagacggaacctggctccttcctgtattatgctcccttcgat
ggcatcctggggctggcctaccccagcatttcctcctccggggccacacccgtctttgac
aacatctggaaccagggcctggtttctcaggacctcttctctgtctacctcagcgccgat
gaccagagtggcagcgtggtgatctttggtggcattgactcttcttactacactggaagt
ctgaactgggtgcctgttaccgtcgagggttactggcagatcaccgtggacagcatcacc
atgaacggagaggccatcgcctgcgctgagggctgccaggccattgttgacaccggcacc
tctctgctgaccggcccaaccagccccattgccaacatccagagcgacatcggagccagc
gagaactcagatggcgacatggtggtcagctgctcagccatcagcagcctgcccgacatc
gtcttcaccatcaatggagtccagtaccccgtgccacccagtgcctacatcctgcagagc
gaggggagctgcatcagtggcttccagggcatgaacctccccaccgaatctggagagctt
tggatcctgggtgatgtcttcatccgccagtactttaccgtcttcgacagggcaaacaac
cagctcctgcttctggtgacagccgacccaggctttctgctgaagacacaagcccagagg
ctggagctgggctctaggaagggcggggatcactcacattacctgagcagaaaaacaact
agcagagcactgaaatggtcccaaaagagggaagagcaagaggcaatcaggtggatcctt
ttcgagttatcaacaaggtttccagtcctgttttctattgctgatgagaagttaacacac
attgaatga