GENSCAN 1.0	Date run:  4-Nov-116	Time: 07:56:00

Sequence gi568815587f:4486891_4594038 : 107148 bp : 40.99% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Sngl +   2011   2955  945  0  0   82   37   563 0.800  46.89
 1.02 PlyA +   4799   4804    6                               1.05

 2.09 PlyA -   4994   4989    6                               1.05
 2.08 Term -   6940   6884   57  1  0   62   45    86 0.682  -1.59
 2.07 Intr -   8059   7622  438  1  0   -7   87   177 0.163   0.89
 2.06 Intr -   8891   8328  564  2  0   34   88   259 0.234  12.56
 2.05 Intr -  11187  11072  116  1  2   59   82    97 0.112   5.45
 2.04 Intr -  19581  19465  117  1  0   57   50    83 0.028   0.92
 2.03 Intr -  24539  24406  134  1  2   69   37    97 0.245   2.07
 2.02 Intr -  28355  28056  300  1  0   73   62   204 0.629  11.22
 2.01 Init -  29034  28409  626  0  2   19   27   305 0.340  12.36
 2.00 Prom -  29804  29765   40                              -5.85

 3.00 Prom +  33111  33150   40                              -6.05
 3.01 Init +  36325  36404   80  0  2   75   98    21 0.203   2.40
 3.02 Intr +  44586  44691  106  0  1   24   84    95 0.883   2.00
 3.03 Term +  45652  45810  159  0  0   48   42   147 0.804   3.06
 3.04 PlyA +  45827  45832    6                               1.05

 4.00 Prom +  50491  50530   40                              -3.65
 4.01 Init +  55668  55809  142  2  1   77   95    63 0.777   6.24
 4.02 Term +  58362  59254  893  1  2   59   38   592 0.754  42.90
 4.03 PlyA +  62223  62228    6                               1.05

 5.00 Prom +  62387  62426   40                             -12.03
 5.01 Init +  63388  63549  162  0  0   81   80    72 0.518   5.53
 5.02 Intr +  63790  63886   97  0  1   65   29   145 0.408   4.96
 5.03 Intr +  66482  66696  215  0  2   68   50   160 0.415   7.71
 5.04 Intr +  69733  69811   79  0  1   75   97    88 0.251   6.61
 5.05 Intr +  71577  71692  116  1  2   64   47    74 0.091   0.15
 5.06 Intr +  76558  76701  144  0  0   45  107    34 0.009   0.56
 5.07 Term +  80865  81008  144  2  0   61   47   177 0.951   7.83
 5.08 PlyA +  81456  81461    6                               1.05

 6.05 PlyA -  81634  81629    6                               1.05
 6.04 Term -  84739  84533  207  1  0   63   41   138 0.882   2.96
 6.03 Intr -  85404  85266  139  2  1   39   72    60 0.497  -0.95
 6.02 Intr -  86582  86416  167  2  2   21   93   114 0.523   3.04
 6.01 Init -  90930  90790  141  0  0   97   84   106 0.990  11.29
 6.00 Prom -  93857  93818   40                              -3.95

 7.00 Prom +  97344  97383   40                              -6.55
 7.01 Sngl + 100028 100975  948  1  0   68   47   454 0.857  33.61
 7.02 PlyA + 103273 103278    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587f:4486891_4594038|GENSCAN_predicted_peptide_1|314_aa
MLPSNITSTHPAVFLLVGIPGLEHLHAWISIPFCFAYTLALLGNCTLLFIIQADAALHEP
MYLFLAMLATIDLVLSSTTLPKMLAIFWFRDQEINFFACLVQMFFLHSFSIMESAVLLAM
AFDRYVAICKPLHYTTVLTGSLITKIGMAAVARAVTLMTPLPFLLRRFHYCRGPVIAHCY
CEHMAVVRLACGDTSFNNIYGIAVAMFIVVLDLLFVILSYVFILQAVLQLASQEARYKAF
GTCVSHIGAILSTYTPVVISSVMHRVARHAAPRVHILLAIFYLLFPPMVNPIIYGVKTKQ
IREYVLSLFQRKNM

>gi568815587f:4486891_4594038|GENSCAN_predicted_CDS_1|945_bp
atgcttccctctaatatcacctcaacacatccagctgtctttttgttggtaggaattcct
ggtttggaacacctgcatgcctggatctccatccccttctgctttgcttatactctggcc
ctgctaggcaactgtacccttctcttcattatccaggctgatgcagccctccatgaaccc
atgtacctctttctggccatgttggcaaccattgacttggttctttcttctacaacgctg
cccaaaatgcttgccatattctggttcagggatcaggagatcaacttctttgcctgtctg
gtccagatgttcttccttcactccttctccatcatggagtcagcagtgctgctggccatg
gcctttgaccgctatgtggccatctgcaagccattgcactacacgacggtcctgactggg
tccctcatcaccaagattggcatggctgctgtggcccgggctgtgacactaatgactcca
ctccccttcctgctcagacgcttccactactgccgaggcccagtgattgcccattgctac
tgtgaacacatggctgtggtaaggctggcgtgtggggacactagcttcaacaatatctat
ggcattgctgtggccatgtttattgtggtgttggacctgctctttgttatcctgtcttat
gtcttcatccttcaggcagttctccagcttgcctctcaggaggcccgctacaaggcattt
gggacatgtgtgtctcacataggtgccatcctgtccacctacactccagtagtcatctct
tcagtcatgcaccgtgtagcccgccatgctgcccctcgtgtccacatactccttgctatt
ttctatctccttttcccacccatggtcaatcctatcatatatggagtcaagaccaagcag
attcgtgagtatgtgctcagtctattccagagaaagaacatgtag

>gi568815587f:4486891_4594038|GENSCAN_predicted_peptide_2|783_aa
MLTPNNACSVPTSFRLTGIPGLESLHIWLSIPFGSMYLVAVLGNITILAVVRMEYSLHQP
MYFFLCMLAVIDLVLSTSTMPKLLAIFWFGAHNIGVNACLAQMFFIHCFATVESGIFLAM
AFDHYVAICDPLHHTLLLTHAVVGRLGLAALLRGVIYIGPLPLVICLRLPLYHTQIIAHS
YCEHMAVVTLACGVTQGSTTYMEWGLAFWAVMGLATSEARLKTLGTCGSHICAILVFYIP
IAVSSLTHRFGHRVPPHIHIHIHIHIHIHILLANIYLLIPPILNPIVYAVRTKQIREALL
HIKARTQTRTLCKLASMIIVALSQVPHLAVPQERSEFTPQHWESWEPQLEGVGVCDSSHK
TKDKNHMIIPIDAEKAFDKIQHPFMLKTLSTEGNPVQYSQFREVGMITDPVRDNSASEKE
KSRLGLQGKIKIKSSQKQKAKKRQKLKGKLCRLTHKFHDLNIMTQSHRVTYNTSHSTPPT
WGQIKVLSHQTEKLLQEKGIPKTGNIILAAFMVVSVVVSIPAVGATQNYASCTYVPFPPL
IQSVSWMDSSVEVYTNNSAFMPAPNDDSFPAQPEGDVHFNLSIGYKYPPLCIGMSPGCLA
YSYQNWMWTIPSLSNDSYQPKYDMLRVYLLEYVEDGWQSYRLREWVAPYPFKLMYTGIIP
PRPKMIHPIVTPEHPELWKLAAAMTGIRLWNTTYQLFATNTKTPIFNITLMSKRVIPIMR
CVKPPHMLLVGNTIIIPNTQTIECDNCKLFTCIDATFNPRTSILLPADASKESEEKSEVN
DKQ

>gi568815587f:4486891_4594038|GENSCAN_predicted_CDS_2|2352_bp
atgttaacccctaataatgcctgctccgtgcctacctctttccggctcactggcatccct
ggcctggaatccctgcacatctggctctccatcccctttggctccatgtacctggtagct
gtgctggggaacataaccatcctggcagtggtaaggatggagtacagcctgcatcagccc
atgtacttcttcctgtgcatgttggctgtcattgacttggtcctgtcaacctctaccatg
cccaaactactggccatcttctggtttggtgcccacaacattggtgttaatgcctgtttg
gcccagatgttcttcattcattgctttgccactgttgagtcaggcatcttccttgccatg
gcttttgatcactatgtggccatctgtgacccactgcatcataccttgttgctcacccat
gctgtggtgggtcgtttggggctggctgccctcctccggggggtaatctacattggacct
ctgcccctagtgatttgtctgaggttgcccctttaccacacccaaatcattgcccattcg
tactgtgagcacatggctgtggtcaccttggcatgtggtgtgacacaagggtcaacaact
tatatggaatggggattggctttctgggctgtaatgggcttggccacctctgaagccagg
cttaaaaccttagggacatgtggctctcacatctgtgccatcctcgtcttctacatcccc
attgctgtttcctctctcacacaccgctttggccatcgtgtgcctccccatatccatatc
catatccatatccatatccatatccatatccttttggccaacatttacctcctcatccca
cctatcctcaacccaatagtctatgctgtccgcacaaagcagatccgagaggctcttctc
catattaaggcaaggactcaaaccaggactctgtgcaaactagccagtatgatcattgtt
gctcttagccaagttcctcatctcgctgtgccccaggagcgctcagaattcaccccacag
cactgggagtcttgggagcctcagcttgagggtgttggggtatgtgattcatcacataaa
actaaagacaaaaaccacatgattatcccaatagatgcagaaaaggcttttgataaaatt
caacatcccttcatgttaaaaactctaagtactgaagggaatccagtacaatatagtcag
ttcagagaagttggcatgattacggatcctgtgagggacaattctgcttcagagaaagag
aaaagcaggctagggctccaggggaaaatcaagataaaaagctctcagaaacaaaaggcg
aagaaacgtcagaaattgaaaggcaagctttgccgcctgacacataaattccatgacctc
aacattatgacacaatctcaccgtgtgacctacaataccagtcattctactccaccaaca
tggggtcaaataaaggtcttatcacatcaaacggaaaaattactacaagaaaaaggaatt
ccaaaaacaggtaatataattctggctgcctttatggtagtcagtgtagtggtgagtata
ccagcagttggggcaactcaaaattatgcttcttgcacatatgttccttttcccccttta
attcagtctgtctcctggatggactcctcagtagaagtttacactaataatagtgccttc
atgccagcccctaatgatgacagctttccagctcaaccagaaggagatgtgcactttaat
ttgtcaatcggctataaatatccaccactgtgcattggaatgtcacctggctgtttagct
tattcttatcagaattggatgtggaccataccatccttgagtaatgattcttatcagcca
aaatatgacatgctcagagtttatttgttagaatatgtagaggacggatggcagtcctac
aggttgagggaatgggtagctccttacccatttaaattgatgtacacaggcatcattcct
cctagaccaaaaatgattcatccaattgttaccccagaacatcctgaattatggaaatta
gctgcagccatgacaggaataaggctatggaacactacctatcaactctttgctactaat
accaagacacccatattcaacatcaccttgatgtctaaacgggtgatacctatcatgaga
tgtgtcaaaccccctcatatgctgttggttggaaatacaattatcattcccaatacacaa
actatagaatgtgataactgtaagctgttcacgtgcattgatgctacttttaatcccaga
acaagtattctcttgcctgcagatgcctccaaagagtctgaggaaaagtccgaagtcaat
gacaagcaatga

>gi568815587f:4486891_4594038|GENSCAN_predicted_peptide_3|114_aa
MLPSGKTQPITSCGSYGAKLPFEKSRSSQSDECGRWVISAFPTEVSGSSHRDWLDSGYSP
RRITAPCQQWNKAGWRMTDELTEVGFRKSVITNFSELKEDVQTHRKEAKTLKKD

>gi568815587f:4486891_4594038|GENSCAN_predicted_CDS_3|345_bp
atgctgccttcaggtaagactcagcccattaccagctgtggtagctatggggcaaaactc
ccatttgagaaaagcagaagctcccagagtgatgagtgcggacgatgggtgatttctgca
tttccaactgaggtatctggttcatctcaccgggactggttggacagtgggtacagccca
cggaggatcacagcgccttgccagcaatggaacaaagcaggatggagaatgactgatgag
ttgacagaagtaggcttcagaaagtcggtaataacaaacttctctgagctaaaggaggat
gttcaaacccatcgcaaggaagctaagaccttgaaaaaagattag

>gi568815587f:4486891_4594038|GENSCAN_predicted_peptide_4|344_aa
MAGTRSVIPETPIGFHEKSLPLVSTIHQAIQITDETSSHLVSSVICAWLESLHVWLSIPF
GSMYLVAVVGNVTILAVVKIERSLHQPMYFFLCMLAAIDLVLSTSTIPKLLGIFWFGACD
IGLDACLGQMFLIHCFATVESGIFLAMAFDRYVAICNPLRHSMVLTYTVVGRLGLVSLLR
GVLYIGPLPLMIRLRLPLYKTHVISHSYCEHMAVVALTCGDSRVNNVYGLSIGFLVLILD
SVAIAASYVMIFRAVMGLATPEARLKTLGTCASHLCAILIFYVPIAVSSLIHRFGQCVPP
PVHTLLANFYLLIPPILNPIVYAVRTKQIRESLLQIPRIEMKIR

>gi568815587f:4486891_4594038|GENSCAN_predicted_CDS_4|1035_bp
atggctggaacaaggtctgtgataccagagacacctattggatttcatgaaaagtcactt
cctcttgtgtccacaattcaccaagcaattcagatcacagatgagaccagttcacacttg
gtctcatctgtgatttgtgcctggctggagtccctacacgtctggctctccatccccttt
ggctccatgtacctggtggctgtggtggggaatgtgaccatcctggctgtggtaaagata
gaacgcagcctgcaccagcccatgtactttttcttgtgcatgttggctgccattgacctg
gttctgtctacttccactatacccaaacttctgggaatcttctggttcggtgcttgtgac
attggcctggacgcctgcttgggccaaatgttccttatccactgctttgccactgttgag
tcaggcatcttccttgccatggcttttgatcgctacgtggccatctgcaacccactacgt
catagcatggtgctcacttatacagtggtgggtcgtttggggcttgtttctctcctccgg
ggtgttctctacattggacctctgcctctgatgatccgcctgcggctgcccctttataaa
acccatgttatctcccactcctactgtgagcacatggctgtagttgccttgacatgtggc
gacagcagggtcaataatgtctatgggctgagcatcggctttctggtgttgatcctggac
tcagtggctattgctgcatcctatgtgatgattttcagggccgtgatggggttagccact
cctgaggctaggcttaaaaccctggggacatgcgcttctcacctctgtgccatcctgatc
ttttatgttcccattgctgtttcttccctgattcaccgatttggtcagtgtgtgcctcct
ccagtccacactctgctggccaacttctatctcctcattcctccaatcctcaatcccatt
gtctatgctgttcgcaccaagcagatccgagagagccttctccaaataccaaggatagaa
atgaagattagatga

>gi568815587f:4486891_4594038|GENSCAN_predicted_peptide_5|318_aa
MAWEGMPLRMLKLQYPECFGLSEVTHFSAVKGNTLVQQQVFPQELLSPLLAARMTPQADE
EMNRRMAEQQRGEKQHLNAESSLAGGVKEQLIMKDKFITQAAPDIRRTLQKWALGPDGTL
EDLWKAATSVFYNKDGETQKQKQLLWPPSKPTNPRIPKTSTIPVQVYEMEVVNLGPSLTK
PESITREAHWSYEDAPHICLKEIHAVQEQTVVAMKTCLSDLNAYWKFWLGQSGKRKKNGI
QIEKKSNCLFADDMIVNLENPIVSASKLLKLHSFTLLVGAGKSVVPVHYLIPPDYVFYPK
CNGTKQTFEKQVLQKQLN

>gi568815587f:4486891_4594038|GENSCAN_predicted_CDS_5|957_bp
atggcatgggaagggatgcccttgaggatgttgaagctgcaataccctgaatgctttggg
ctttcagaggtgacccacttttctgcagtaaaaggtaacactttggtgcagcaacaggta
ttccctcaggagctgctctcacctcttctggctgccaggatgaccccacaagcagatgag
gagatgaacagaagaatggcagaacagcagagaggagagaagcagcatctgaacgctgaa
agcagtttggctgggggtgtcaaggaacaactaattatgaaggataagtttattactcag
gcagcccctgatatcaggaggacattgcagaaatgggccctgggaccagacggtacttta
gaggacctctggaaagcggctacctcagtcttttacaataaagatggggagacacaaaag
cagaagcagcttctgtggccaccaagcaagcccacaaaccccagaattcccaagacttcc
actatacctgtccaggtctatgagatggaagtggttaatctgggaccaagcctgacaaaa
ccagagagcataacaagggaggcccactggagctatgaagatgctccccacatctgtttg
aaggagatccatgcagtacaagaacagactgtggtggccatgaaaacatgcctttcagat
ttgaatgcatattggaagttctggctagggcaatcaggcaagaggaagaaaaacggtatt
caaatagaaaagaagtcaaattgtctgtttgcagatgacatgattgtgaatttagaaaac
cccatagtctcagcctcaaaactccttaagctgcactcatttacccttctcgttggtgct
gggaagtctgtggtgcccgtgcattacctgataccacctgactatgtgttctatcctaaa
tgcaacgggacaaaacagacatttgagaaacaagtacttcagaagcagctgaattga

>gi568815587f:4486891_4594038|GENSCAN_predicted_peptide_6|217_aa
MALVQALVPREREPKLSILQMDRGDPQHSSHWCPEREKVKLLTLKPRETSKNILINFYRA
FNLDKDVFIHQANHPLTVPSSVVMGDNGHTLAEDDKRPCFRVLPCYLERVSSGISISWIS
APLPVGAMKHQLLCDLMDLITLSFWLAGQCMSLKATNMQHCKCSIATSDWAIELDRTDYK
TLPSEYSILALLQVFAGKNCMDRVLLHVDVNYLKSLP

>gi568815587f:4486891_4594038|GENSCAN_predicted_CDS_6|654_bp
atggctctagtgcaggcgctggtgcccagagaaagagagccaaagctgtccattttgcag
atggacagaggggacccacaacacagctcacactggtgcccagagagagaaaaagttaag
ctgctgaccctgaagccaagggaaacatccaaaaatatccttataaacttctacagagcc
tttaacttagataaggatgtgttcatacaccaggccaaccacccactaacagtgccgtct
agtgtggtgatgggtgataacggccacaccttggcagaagatgacaaaagaccttgcttt
agggtactaccttgctatctggaacgtgtttccagtggaatctctatttcctggatctca
gcccctctacctgtgggagcaatgaaacaccagcttctatgtgacttaatggatcttatc
acgctttctttctggttagcaggtcagtgtatgagccttaaagctaccaacatgcaacac
tgcaagtgttcaatagccacaagtgactgggccattgaattggaccgcactgattacaaa
acacttccatcagaatattccatcctagcactgctccaggtctttgcagggaaaaactgt
atggatcgtgttctacttcatgtggatgtgaactacttgaagtccctgccctga

>gi568815587f:4486891_4594038|GENSCAN_predicted_peptide_7|315_aa
METPASFLLVGIPGLQSSHLWLAISLSAMYIIALLGNTIIVTAIWMDSTRHEPMYCFLCV
LAAVDIVMASSVVPKMVSIFCSGDSSISFSACFTQMFFVHLATAVETGLLLTMAFDRYVA
ICKPLHYKRILTPQVMLGMSMAITIRAIIAITPLSWMVSHLPFCGSNVVVHSYCEHIALA
RLACADPVPSSLYSLIGSSLMVGSDVAFIAASYILILKAVFGLSSKTAQLKALSTCGSHV
GVMALYYLPGMASIYAAWLGQDVVPLHTQVLLADLYVIIPATLNPIIYGMRTKQLRERIW
SYLMHVLFDHSNLGS

>gi568815587f:4486891_4594038|GENSCAN_predicted_CDS_7|948_bp
atggaaacccctgcctccttcctccttgtgggtatcccaggactgcaatcttcacatctt
tggctggctatctcactgagtgccatgtacatcatagccctgttaggaaacaccatcatc
gtgactgcaatctggatggattccactcggcatgagcccatgtattgctttctgtgtgtt
ctggctgctgtggacattgttatggcctcctcggtggtacccaagatggtgagcatcttc
tgctcaggagacagctcaatcagctttagtgcttgtttcactcagatgttttttgtccac
ttagccacagctgtggagacggggctgctgctgaccatggcttttgaccgctatgtagcc
atctgcaagcctctacactacaagagaattctcacgcctcaagtgatgctgggaatgagt
atggccatcaccatcagagctatcatagccataactccactgagttggatggtgagtcat
ctacctttctgtggctccaatgtggttgtccactcctactgtgagcacatagctttggcc
aggttagcatgtgctgaccccgtgcccagcagtctctacagtctgattggttcctctctt
atggtgggctctgatgtggccttcattgctgcctcctatatcttaattctcaaggcagta
tttggtctctcctcaaagactgctcagttgaaagcattaagcacatgtggctcccatgtg
ggggttatggctttgtactatctacctgggatggcatccatctatgcggcctggttgggg
caggatgtagtgcccttgcacacccaagtcctgctagctgacctgtacgtgatcatccca
gccaccttaaatcccatcatctatggcatgaggaccaaacaactgcgggagagaatatgg
agttatctgatgcatgtcctctttgaccattccaacctgggttcatga