GENSCAN 1.0	Date run:  4-Nov-116	Time: 20:37:30

Sequence gi568815587f:114300672_114507804 : 207133 bp : 39.16% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  11330  11630  301  1  1   57   85   339 0.009  27.96
 1.02 Intr +  15528  15713  186  1  0   78   24   165 0.027   7.84
 1.03 Intr +  24846  24955  110  1  2   74   93    27 0.012   0.88
 1.04 Intr +  27106  27241  136  0  1   56  102    69 0.064   4.32
 1.05 Intr +  39522  39805  284  1  2   77    9   169 0.182   4.11
 1.06 Intr +  46546  46686  141  0  0   66   60    87 0.178   3.33
 1.07 Intr +  47172  47258   87  2  0   57  115    62 0.218   5.05
 1.08 Term +  47702  48169  468  1  0   62   42   229 0.960   9.69
 1.09 PlyA +  49100  49105    6                               1.05

 2.05 PlyA -  49724  49719    6                               1.05
 2.04 Term -  63496  63437   60  1  0   92   49    52 0.561  -1.47
 2.03 Intr -  65522  65329  194  0  2  120   66   136 0.739  12.89
 2.02 Intr -  70910  70833   78  0  0   45   72   105 0.469   3.20
 2.01 Init -  76123  76039   85  1  1   19   71    98 0.284   2.23
 2.00 Prom -  76640  76601   40                              -4.55

 3.00 Prom +  82062  82101   40                              -5.75
 3.01 Init +  98885  98972   88  1  1   77   98    47 0.001   5.45
 3.02 Intr +  99346  99578  233  2  2   53    6   221 0.000   6.97
 3.03 Intr +  99983 100366  384  1  0   -6   26   266 0.000   5.12
 3.04 Intr + 101027 101189  163  1  1   88   93    76 0.770   6.73
 3.05 Intr + 102157 102244   88  2  1   64   90    16 0.509  -2.49
 3.06 Intr + 105035 105128   94  2  1   67   66    42 0.462  -1.05
 3.07 Intr + 113285 113453  169  1  1  107   70   123 0.277  11.00
 3.08 Intr + 115869 115971  103  1  1   13  105    94 0.182   1.91
 3.09 Intr + 125020 125107   88  1  1  102   15    88 0.005   1.95
 3.10 Intr + 138795 139004  210  2  0   19  105   302 0.933  23.19
 3.11 Intr + 139985 140068   84  1  0   66   62    67 0.665   1.00
 3.12 Intr + 143185 143262   78  0  0   97   87    92 0.985   8.83
 3.13 Intr + 143870 143981  112  1  1   42   98   103 0.867   5.73
 3.14 Intr + 145308 145416  109  1  1   61  110    83 0.996   6.22
 3.15 Intr + 147155 147208   54  2  0   45   97    78 0.712   1.58
 3.16 Intr + 149175 149295  121  0  1   77   84   148 0.932  12.88
 3.17 Intr + 152561 152690  130  1  1   58   52    45 0.094  -2.75
 3.18 Intr + 166186 166278   93  2  0   70   94    69 0.457   4.72
 3.19 Term + 173847 173953  107  1  2   23   44   161 0.526   2.79
 3.20 PlyA + 174026 174031    6                               1.05

 4.00 Prom + 182805 182844   40                              -2.75
 4.01 Init + 188356 188622  267  0  0   68   41   197 0.201  10.03
 4.02 Intr + 196693 196761   69  0  0   60  115    49 0.325   3.26
 4.03 Intr + 203674 203813  140  0  2   36   80   116 0.099   3.94
 4.04 Term + 205827 206286  460  0  1   -4   48   213 0.062   1.68
 4.05 PlyA + 206294 206299    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  19008  19173  166  0  1  125   38    93 0.810   4.41
S.002 Sngl -  99660  99289  372  0  0   59   41   370 0.997  25.27
S.003 Init + 100001 100366  366  1  0   83   26   264 0.818  16.85
S.004 Sngl + 205849 206286  438  0  0   65   48   203 0.895  10.01


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587f:114300672_114507804|GENSCAN_predicted_peptide_1|570_aa
MTGVENNVCGFVFFRVKGPEKEEKLRQAVKQVLKCDVTQSQPLGAVPLPPADCVLSTLCL
DAACPDLPTYCRALRNLGSLLKPGGFLVIMDALKSSYYMIGPTFWGNVQQSHFKQTFVMQ
EAASLSVTSWGESGEKKAIKKVVNPFGVMQLSLRDSHHLAVKSLRALHMSPPSWIHQEGK
RSKPLYGRKDFLFTDETSKEIRGASLECLWLEGDSRMSPVRAISILQSNLSDLSRNRKAN
ISGEVHVNWKSATTKNVTQTGLNVKENLLIYKPEKPKDIRLQSRLDSATQGQQRPRRLFI
SPLCVTQHVFSPSGHKMAASSFQRCDVLAHIQRDENVPQESPSAVWKLGDDRSCYFLLNC
GVEGAPQLRFPREGSLQCRSARMGWRDWVEVVMPPMPIPSPPSTPTPIMSGRTVQTSGLI
PSSSRGQQTGIPSPIFKYIMAPALANMSFPSKGVGLSGIIRKACEKNKVPQSQFRGCEKY
LVTGCPRTPLMVTDLEDSCLGRKSKTEKAAPVSRRKLVSWPSMVKLIWGSVRVMACSGAC
RRHPQSCCWTILLVASGPEDLLPQGQCAVQ

>gi568815587f:114300672_114507804|GENSCAN_predicted_CDS_1|1713_bp
atgactggagtggaaaacaatgtctgtgggtttgtgtttttcagagtcaagggtccagag
aaggaggagaagttgagacaggcggtcaagcaggtgctgaagtgtgatgtgactcagagc
cagccactgggggccgtccccttacccccggctgactgcgtgctcagcacactgtgtctg
gatgccgcctgcccagacctccccacctactgcagggcgctcaggaacctcggcagccta
ctgaagccagggggcttcctggtgatcatggatgcgctcaagagcagctactacatgatt
ggtcctactttctggggaaatgttcaacagtctcactttaagcaaacctttgtgatgcag
gaagctgcaagtctctctgtaacatcctggggagagagtggggagaagaaagctattaaa
aaggtcgttaacccatttggtgtcatgcagctcagtcttcgtgattcccatcatctggct
gtcaaaagccttcgggctttgcacatgtcacccccgtcctggatccaccaggaaggtaaa
cggtcaaaaccattgtatgggaggaaggattttctgtttacagatgaaacaagtaaggag
attaggggagccagcttagaatgtctgtggctggaaggagactctagaatgtctccagtg
agagccatttccatacttcagagcaacttgtcagatctttccagaaacagaaaggccaac
atctctggagaagtgcatgttaattggaaatctgcaactaccaaaaatgtcactcaaact
ggcttgaacgttaaagaaaatttattgatttacaaacctgaaaagcctaaagatatcagg
cttcagtcaagacttgattcagcaactcaagggcagcaaagaccccggaggcttttcatt
tctcctctctgcgttacacaacatgtattttctccaagtggccacaagatggctgcaagt
agctttcagcgctgcgatgtccttgctcatatccaaagagacgagaatgtccctcaagaa
agcccaagtgctgtttggaagttgggcgacgatcgttcttgctacttcctgctgaactgc
ggggtagaaggggctccgcagttgaggtttcctcgggaggggagtcttcagtgtcgtagt
gcaagaatgggttggcgggattgggtggaggtggtaatgcctccaatgccgattcctagt
cctcctagtaccccaaccccaataatgagtggcaggacagtacagacttcaggattaatt
ccttcctccagtagagggcagcaaacgggtattccttctcctatattcaagtatataatg
gcccctgctttagctaatatgtccttccctagtaaaggagtagggctctcaggcataata
agaaaggcatgtgagaaaaataaggttccccagtcacaatttagagggtgtgagaaatac
ctagtgactggctgtcctaggacccctttgatggtgacagacctggaggatagttgtctg
ggacgaaagagtaaaactgagaaggccgcgccagtgtccaggaggaagttagtttcctgg
ccctcaatggttaagcttatctggggctctgtgagggtgatggcatgctctggcgcctgc
cgcaggcaccctcagtcctgttgttggaccatcttgttagtggcctctggcccagaggac
cttctccctcaggggcagtgtgccgtccagtga

>gi568815587f:114300672_114507804|GENSCAN_predicted_peptide_2|138_aa
MTGELWTDDRTKGALKVSIAKQAVSLLISKCENQSRVLSTSPQTEKLEVEGILLGKSHCG
EDRKEHNNACHQEEEAPDVNPLHGLQASGSPGKTQRIKSQALEGTRLYSHSEETRSGLIL
PPSGNLRPTPFDLIRGRL

>gi568815587f:114300672_114507804|GENSCAN_predicted_CDS_2|417_bp
atgacaggagagctttggactgatgaccgcacaaagggtgctcttaaagtgagtattgcc
aagcaagctgtcagtcttttgataagtaagtgtgagaaccagtcgagagtgttaagcacc
agtccacagactgagaaattggaagtagaaggaatactgctgggaaagtcccactgtggg
gaggataggaaagagcataacaatgcctgccaccaggaggaagaggccccagatgtcaac
ccattgcatggtttgcaggcatcgggatcaccgggaaagactcaaagaatcaagtcacag
gcactggagggaacaaggctttactcacatagcgaagagacaagatcaggcttaatactc
cctccatcaggaaacttaagaccaactccatttgatctgatcagaggacgtctataa

>gi568815587f:114300672_114507804|GENSCAN_predicted_peptide_3|835_aa
MEDGKCQGKDGRINQCNKKEHFFFANRSKAHFLGDRVQRQGLGKVRIWLGGSGPGHLVPL
GSGRHHPLDGSRPERLVAPPAEVLDESLQAWKRGSRLRRPSPTLTPAGGGDAEMGAAAAE
ADRTLFVGNLETKVTEELLFELFHQVSGWVRPFAFRFPSRLGPGQRPPRFLFVAVRGPDG
WLFGGERRVWVAKRSLGVAFLEDLGSFRPKVTTKGGGGILDQVSRGRDPGVLGNTAGPVI
KVKIPKDKDGKPKQFAFVNFKHEVSVPYAMNLLNGIKLYGRPIKIQFRSGSSHAPQDVSL
SYPQHHVGNSSPTSTSPSSRYERTMDNMTSSAQIIQRSFSSPENFQRQAVVVSSNLYTDQ
LSHEYGRKPAGLREFSPCATYRFSVLCTGHSSCLCFAGLSAVSSELTIGLHISLAQNTEK
FEEMCQQLEELLVGCCHMPTRHRSFTPLPPPLQTHEEYCQATANIHIRPKRLLRLRQRRL
RDWGRGCWSRVMLGGSLGSRLLRGVGGSHGRFGARGVREGGAAMAAGESMAQRMVWVDLE
MTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHGKSGLTKA
VKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHEDKKFLDKYMPQFMKHLHYRIIDV
STVKELCRRWYPEEYEFAPKKAASHRALDDISESIKELQFYRNNIFKKKIDEKKRKIIEN
GENEKTRDFVDLRTDSSNYLPIRVMQWNNFIQALGKTKTTLYNALLKHSRGRWSFGSDDV
APIAELSWRLKHVSSDPCQFLYQVRLTVIIGFSHSAVIDDFDESSSGGGMRTKPD

>gi568815587f:114300672_114507804|GENSCAN_predicted_CDS_3|2508_bp
atggaagatggtaaatgccaaggaaaagatggaaggataaatcagtgtaataaaaaggag
cacttctttttcgccaacagaagtaaagcacacttcttaggagatcgggttcaacggcag
ggattgggtaaggtgagaatctggcttggcggctccggccccggccatctggttcccttg
ggctccggccgccaccatccactcgacggctctcggcccgaacgcttggtcgcaccgcct
gccgaggtcctagatgaatcgcttcaggcctggaaacgaggaagccgtctccggagacca
tcgccaacgctgacgcccgcgggagggggcgacgctgagatgggggcggcggcggcggaa
gcggatcgcactctctttgtgggcaaccttgaaacgaaagtgaccgaggagctccttttc
gagcttttccaccaggtaagcggctgggttcggccctttgcctttcgttttccgtctcgc
ctagggcctggccagcggccaccccgttttcttttcgtagccgtcaggggacccgacggg
tggctgtttgggggtgaaaggcgggtctgggttgcgaaacgctcgctgggtgtcgctttc
ctggaagatcttggttcgtttaggccgaaagtgacgactaaaggtggtggagggatcctc
gatcaggtttcccgtggtagagatccaggggtccttgggaacacagctgggccagtaata
aaggtgaaaattccaaaagataaggatggtaaaccaaagcagtttgcgtttgtgaatttc
aaacatgaagtgtctgttccttatgcaatgaatctacttaatggaatcaaactttatgga
aggcctatcaaaattcaatttagatcaggaagtagtcatgccccacaagatgtcagtttg
tcatatccccaacatcatgttggaaattcaagccctacctccacatctcctagcagcagg
tacgaaaggactatggataacatgacttcatcagcacagataattcagagatctttctct
tctccagaaaattttcagagacaagcagtggtagtttcttcaaacctgtatactgatcag
ctgtctcatgaatacgggagaaaacctgcaggtctccgagagttctctccctgtgcaact
tatcgcttttcagtgctgtgtaccggccattccagctgcctttgtttcgctggactctca
gctgtgtcttctgaactcactatagggctgcacatatctttggcccagaacacagagaag
tttgaggagatgtgtcagcagctggaggagctgctggttgggtgctgccacatgccaaca
aggcacaggagcttcaccccactgccaccaccactacagacccatgaggagtactgccag
gctaccgccaatattcacataaggcccaagcgactattgcgcctgcgccagcgccggctg
cgagactggggccgtggctgctggtcccgggtgatgctaggcggctccctgggctccagg
ctgttgcggggtgtaggtgggagtcacggacggttcggggcccgaggtgtccgcgaaggt
ggcgcagccatggcggcaggggagagcatggctcagcggatggtctgggtggacctggag
atgacaggattggacattgagaaggaccagattattgagatggcctgtctgataactgac
tctgatctcaacattttggctgaaggtcctaacctgattataaaacaaccagatgagttg
ctggacagcatgtcagattggtgtaaggagcatcacgggaagtctggccttaccaaggca
gtgaaggagagtacaattacattgcagcaggcagagtatgaatttctgtcctttgtacga
cagcagactcctccagggctctgtccacttgcaggaaattcagttcatgaagataagaag
tttcttgacaaatacatgccccagttcatgaaacatcttcattatagaataattgatgtg
agcactgttaaagaactgtgcagacgctggtatccagaagaatatgaatttgcaccaaag
aaggctgcttctcatagggcacttgatgacattagtgaaagcatcaaagagcttcagttt
taccgaaataacatcttcaagaaaaaaatagatgaaaagaagaggaaaattatagaaaat
ggggaaaatgagaagaccagagattttgtggatctgaggacagactccagtaactaccta
cctattagagtcatgcaatggaacaacttcatccaagctcttggaaagacaaagacaact
ttgtacaatgccctgttgaaacactcaaggggaagatggtcatttggcagtgatgatgtg
gccccgattgcagaattgagttggaggctgaagcatgtgagctctgatccttgccagttc
ctgtatcaagtaagacttacagttatcattggatttagccattcagcagtgattgatgac
tttgatgagagcagttctggtggagggatgcggacaaagcctgattga

>gi568815587f:114300672_114507804|GENSCAN_predicted_peptide_4|311_aa
MTTDPPEIQITIREYYKHLYANKLENLEEMDKFLDTYTLPRLNQEEVESLNRPITGSEIE
AIINSLPTKKSPGPDGFTAEFYQRYKEELAFAFTHHSLTQSEQLPVLQAPFMRRHPDLCH
PKPMPPPVQQHTQSPAGPPHTLTNCLASIAVVNAHQGSSKCKRTEIMKDRLLDHITIKLE
IKTKKFTHNYTITWKLNNLLLNGFWVNNEIKAEIKKFFETNEDKDITYQNLWDTAKAVSR
GKLITLNTHIKKLDRSQINNLTSQLKELENQKQTNPKASRRQEITKIRAELKEIETQKNP
AKDQQIQELVF

>gi568815587f:114300672_114507804|GENSCAN_predicted_CDS_4|936_bp
atgaccactgatcctccagaaatacaaattaccatcagagaatactataaacacctctat
gcaaataaactagaaaatctagaagaaatggataaattcctcgacacatacaccctccca
agactaaaccaggaagaagttgaatctctgaatagaccaataacaggctctgaaattgag
gcaataattaatagcttaccaaccaaaaaaagtccgggaccagatggattcacagccgaa
ttctaccagaggtacaaagaggagctggccttcgcatttactcaccactcactgactcag
tcagagcaacttccagtcctgcaagctccatttatgagaaggcatccagacctgtgccac
cccaagccaatgccacctccagtgcaacagcacacacagtctccagcagggcccccccac
accctcaccaactgccttgcctctatcgctgtggtgaacgcccaccagggaagcagcaaa
tgcaaaagaactgaaatcatgaaagacagactcttggaccacatcacaatcaaattagaa
atcaagactaagaaattcacccacaactatacaattacatggaaattgaataacctgcta
ctgaatggcttttgggtaaataatgaaattaaggcagaaatcaagaagttctttgaaact
aatgaggacaaagatatcacataccagaatctctgggacacagctaaggcagtgtcaaga
gggaaattaataacactaaacacccatatcaaaaagttagataggtctcaaattaacaac
ctaacatcacaactaaaagaattagagaaccagaagcaaacaaatcccaaagctagcaga
aggcaagaaataaccaaaatcagagctgaactgaaggagattgagacacaaaaaaaccct
gcaaaagatcaacaaatccaggagctggttttttga