GENSCAN 1.0	Date run:  6-Nov-116	Time: 00:27:25

Sequence gi568815586r:7714319_7921415 : 207097 bp : 45.20% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.05 PlyA -    381    376    6                               1.05
 1.04 Term -   1016    872  145  1  1   51   54    96 0.401  -0.12
 1.03 Intr -   2357   2220  138  1  0   85  110    55 0.488   6.98
 1.02 Intr -  16594  16479  116  1  2  134   94    26 0.868   7.05
 1.01 Init -  23152  23111   42  1  0   59   91    56 0.814   3.43
 1.00 Prom -  24159  24120   40                              -5.26

 2.04 PlyA -  24199  24194    6                              -0.45
 2.03 Term -  25257  25097  161  1  2   60   47    90 0.892   0.20
 2.02 Intr -  27213  27103  111  1  0   63   82    87 0.480   5.95
 2.01 Init -  33030  33000   31  0  1   77   99    35 0.806   3.40
 2.00 Prom -  39184  39145   40                              -5.66

 3.00 Prom +  43145  43184   40                              -3.06
 3.01 Init +  55677  55997  321  2  0   56   80   172 0.437  10.54
 3.02 Intr +  73400  73525  126  1  0   37  109    49 0.011   2.78
 3.03 Intr +  78670  78894  225  0  0   68   96   107 0.692   7.68
 3.04 Intr +  80139  80225   87  2  0   99   92    61 0.924   7.77
 3.05 Term +  80361  80777  417  2  0  113   49   167 0.559  10.58
 3.06 PlyA +  81972  81977    6                               1.05

 4.09 PlyA -  82451  82446    6                               1.05
 4.08 Term - 100216  99998  219  1  0   69   41   247 0.999  15.14
 4.07 Intr - 103716 103513  204  0  0  131   87   135 0.999  17.10
 4.06 Intr - 107007 106903  105  0  0  118   84   117 0.995  14.71
 4.05 Intr - 113356 113177  180  1  0   13   68   161 0.327   6.66
 4.04 Intr - 115688 115448  241  1  1   80   78   195 0.974  15.25
 4.03 Intr - 117446 117286  161  2  2   98   72   116 0.994   9.79
 4.02 Intr - 118496 118404   93  2  0  131  113   162 0.969  23.16
 4.01 Init - 140065 140024   42  1  0   79   87    44 0.482   3.82
 4.00 Prom - 143530 143491   40                              -4.06

 5.00 Prom + 144102 144141   40                              -7.56
 5.01 Init + 148134 148295  162  2  0   97   90   165 0.828  15.54
 5.02 Intr + 150568 150649   82  0  1   77   76    10 0.495  -2.09
 5.03 Intr + 156692 157006  315  0  0  -22   17   449 0.254  22.84
 5.04 Intr + 158435 158679  245  0  2   61   68   118 0.454   4.32
 5.05 Term + 173694 173804  111  2  0   84   33    47 0.004  -2.64
 5.06 PlyA + 173992 173997    6                               1.05

 6.00 Prom + 174634 174673   40                              -3.36
 6.01 Init + 176431 176532  102  0  0   70  109    85 0.990   9.04
 6.02 Intr + 181197 181421  225  2  0   70   96   110 0.909   8.18
 6.03 Intr + 183947 184033   87  1  0  121   92    80 0.989  11.87
 6.04 Term + 184217 184585  369  1  0   75   49   211 0.935  10.55
 6.05 PlyA + 185213 185218    6                               1.05

 7.02 PlyA - 185280 185275    6                               1.05
 7.01 Sngl - 201879 201718  162  0  0   76   52   141 0.306   3.89

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  73424  73525  102  1  0   70  109    78 0.846   8.34
S.002 Sngl + 166895 167269  375  1  0   58   52   210 0.911   8.54


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:7714319_7921415|GENSCAN_predicted_peptide_1|146_aa
MGADLVVINTREEQDFIIQNLKRNSSYFLGLSDPGGRRHWQWVDQTPYNENVTHSAEVFV
LLLYSATVKIFVTARESINLTPRVTPSVNYELWMIILSGHSSSISLRTAAPTDSRRSKAS
DRGETDSLLALIVKLLRFFINVSEEI

>gi568815586r:7714319_7921415|GENSCAN_predicted_CDS_1|441_bp
atgggggctgatctggtggtgatcaacaccagggaagaacaggatttcatcattcagaat
ctgaaaagaaattcttcttattttctggggctgtcagatccagggggtcggcgacattgg
caatgggttgaccagacaccatacaatgaaaatgtcacacactctgctgaagtgtttgtc
ctcttactatacagtgctaccgtgaagatatttgtgacagcacgtgaaagtatcaaccta
acaccaagagtgacccctagtgtaaactatgaactctggatgataatcctgtcaggccac
tcatcttcgatttccctgaggactgctgctcctacagactctcgacggagtaaagcttcc
gatagaggggaaacagattcgctactagcgttgatagtcaagttactaaggttctttatc
aacgtctcggaggagatttga

>gi568815586r:7714319_7921415|GENSCAN_predicted_peptide_2|100_aa
MVPEEEPQDRVPHNFMYSKTVKRLSKLREYQQYHPSLTCVMEGKDIEGIIGRLCPGSGTA
YSVVCRAGGRQVPPQKCLYGLNPLQEGNMDPKGIKQLFQE

>gi568815586r:7714319_7921415|GENSCAN_predicted_CDS_2|303_bp
atggtgcctgaagaagagcctcaagaccgagtgcctcacaattttatgtatagcaaaact
gtcaagaggctgtccaagttacgagagtatcaacagtatcatccaagcctgacctgcgtc
atggaaggaaaggacatagaagggataattggtcggctgtgtccaggatcagggactgcc
tacagcgtcgtatgcagagccggagggagacaagttccaccccagaaatgcctctatggc
cttaatcctttgcaggaaggaaatatggacccaaagggcatcaaacaattatttcaagaa
tga

>gi568815586r:7714319_7921415|GENSCAN_predicted_peptide_3|391_aa
MPWDQDPEQSTGNYSEDEQNGKQKWREEGEAGRKREREKEEKNEKELQDEQENKRKRENE
KQKQYPEKRLVSKSLMHTLWAKFKLNRCPTIQESLSLSFEFDMTHKQTQWDRERGMGEFS
SGFYAKTPFCKEQSFWYLPFGELRASSASDSPDSSTSPKGKQPTSAEKSVAKKEDKVPVK
KQKTRTVFSSTQLCVLNDRFQRQKYLSLQQMQELSNILNLSYKQVKTWFQNQRMKSKRWQ
KNNWPKNSNGVTQKASAPTYPSLYSSYHQGCLVNPTGNLPMWSNQTWNNSTWSNQTQNIQ
SWSNHSWNTQTWCTQSWNNQAWNSPFYNCGEESLQSCMQFQPNSPASDLEAALEAAGEGL
NVIQQTTRYFSTPQTMDLFLNYSMNMQPEDV

>gi568815586r:7714319_7921415|GENSCAN_predicted_CDS_3|1176_bp
atgccttgggatcaagatccagaacaatcaactggaaattacagtgaagatgaacaaaat
ggaaagcagaaatggagagaagaaggagaagcaggcagaaagagagaacgagaaaaagaa
gaaaaaaacgaaaaggagctgcaagatgaacaggaaaacaaaaggaaaagggaaaatgag
aaacagaaacagtatcccgagaaaagattagtcagcaaatccctcatgcatactctctgg
gcaaagtttaagttaaacaggtgccccactatacaagagagtctatcactgtcatttgaa
tttgacatgacacataaacagacacaatgggacagggagcgggggatgggggaattcagc
tcaggcttttatgcaaagacccccttctgcaaagaacaaagcttctggtacctgcccttt
ggagagctgcgggcaagctcagcctcggacagccctgattcttccaccagtcccaaaggc
aaacaacccacttctgcagagaagagtgtcgcaaaaaaggaagacaaggtcccggtcaag
aaacagaagaccagaactgtgttctcttccacccagctgtgtgtactcaatgatagattt
cagagacagaaatacctcagcctccagcagatgcaagaactctccaacatcctgaacctc
agctacaaacaggtgaagacctggttccagaaccagagaatgaaatctaagaggtggcag
aaaaacaactggccgaagaatagcaatggtgtgacgcagaaggcctcagcacctacctac
cccagcctttactcttcctaccaccagggatgcctggtgaacccgactgggaaccttcca
atgtggagcaaccagacctggaacaattcaacctggagcaaccagacccagaacatccag
tcctggagcaaccactcctggaacactcagacctggtgcacccaatcctggaacaatcag
gcctggaacagtcccttctataactgtggagaggaatctctgcagtcctgcatgcagttc
cagccaaattctcctgccagtgacttggaggctgccttggaagctgctggggaaggcctt
aatgtaatacagcagaccactaggtattttagtactccacaaaccatggatttattccta
aactactccatgaacatgcaacctgaagacgtgtga

>gi568815586r:7714319_7921415|GENSCAN_predicted_peptide_4|414_aa
MCEWKESKSILEIKVTPALIFAITVATIGSFQFGYNTGVINAPETIIKEFINKTLTDKAN
APPSEVLLTNLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLIVNLLAATGGCLMGLC
KIAESVEMLILGRLVIGLFCGLCTGFVPMYIGEISPTALRGAFGTLNQLGIVIGILVAQR
LWGTQDVSQDIQEMKDESARMSQEKQVTVLELFRVSSYRQPIIISIVLQLSQQLSGINAV
FYYSTGIFKDAGVQQPIYATISAGVVNTIFTLLSNHYNGMSFVCIGAILVFVACFEIGPG
PIPWFIVAELFSQGPRPAAMAVAGCSNWTSNFLVGLLFPSAAYYLGAYVFIIFTGFLITF
LAFTFFKVPETRGRTFEDITRAFEGQAHGADRSGKDGVMGMNSIEPAKETTTNV

>gi568815586r:7714319_7921415|GENSCAN_predicted_CDS_4|1245_bp
atgtgcgagtggaaggaatctaagagtattttggagataaaggtcaccccagctctgatc
tttgccatcacagttgctacaatcggctctttccagtttggctacaacactggggtcatc
aatgctcctgagacgatcataaaggaatttatcaataaaactttgacggacaaggcaaat
gcccctccctctgaggtgctgctcacgaatctctggtccttgtctgtggccatattttcc
gtcgggggtatgatcggctccttttccgtcggactctttgttaaccgctttggcaggcgc
aattcaatgctgattgtcaacctgttggctgccactggtggctgccttatgggactgtgt
aaaatagctgagtcagttgaaatgctgatcctgggccgcttggttattggcctcttctgc
ggactctgcacaggttttgtgcccatgtacattggagagatctcgcctactgccctgagg
ggtgcctttggcactctcaaccagctgggcatagttattggaattctggtggcccagcgg
ttgtggggcacccaggatgtatcccaagacatccaggagatgaaagatgagagtgcaagg
atgtcacaagaaaagcaagtcaccgtgctggagctctttagagtgtccagctaccgacag
cccatcatcatttccattgtgctccagctctctcagcagctctctgggatcaatgctgtg
ttctattactcaacaggaatcttcaaggatgcaggtgttcaacagcccatctatgccacc
atcagcgcgggtgtggttaatactatcttcactttactttctaatcactataatgggatg
agctttgtctgtattggggctatcttggtctttgtggcctgttttgaaattggaccaggc
cccattccctggtttattgtggccgaactcttcagccagggcccccgcccagctgcgatg
gcagtggccggctgctccaactggacctccaacttcctagtcggattgctcttcccctct
gctgcttactatttaggagcctacgtttttattatcttcaccggcttcctcattaccttc
ttggcctttaccttcttcaaagtccctgagacccgtggcaggacttttgaggatatcaca
cgggcctttgaagggcaggcacacggtgcagatagatctgggaaggacggcgtcatgggg
atgaacagcatcgagcctgctaaggagaccaccaccaatgtctaa

>gi568815586r:7714319_7921415|GENSCAN_predicted_peptide_5|304_aa
MPEPSHPLCGLLCGRASPTNAAPCSTAPSPIDHPRAKECEHMARDWQAAPPAAPISSWPA
LYVTLVSAQIYRKEAFPDHTTGGQHDKLASPRKNPMDEYLQGMMSEAPGPINFTTSLTMF
GEKLNGTDPQDVIQNAFTCFNEESSGFIHEDHLQELLTTMGDSFTDEEVDEMYWEAPIDK
KRQVQLAQVLIPAPPGRRDGAAHPPPRPRDCGWAPRLRSTTHLPGRCAPAGPACSRWDPL
TASKSLGFDFEWSVNVVTKRDSVHREPSHHEVGPSLIQEEGRKSPESGLLPPMLSLWFFL
QKST

>gi568815586r:7714319_7921415|GENSCAN_predicted_CDS_5|915_bp
atgcctgagccttcccaccccctctgtggcctcctgtgcggacgagcctccccgacgaat
gccgccccctgctccacggcgcccagtcccatcgaccacccaagagctaaggaatgcgag
cacatggcgcgggactggcaggcagctccacctgcagcaccgatctcctcatggccggct
ctttatgtcactctggtttctgctcaaatttaccgtaaagaggccttccctgaccacact
acagggggacagcacgacaagctggcttcaccgcggaagaaccccatggatgaatacctg
cagggcatgatgagcgaggccccagggcccatcaacttcaccacttccctcaccatgttt
ggggagaagctgaatggaacagacccccaggatgtgatccaaaacgccttcacctgcttc
aacgaggaatcctcaggtttcattcatgaggaccacctccaggagctgctcaccaccatg
ggtgacagcttcacagatgaagaagtggatgagatgtactgggaggcacccattgataaa
aaaagacaagttcaactagctcaggtcctcattcccgcaccccccggccgcagggacggc
gcggcgcacccacctcccagaccccgcgactgcggttgggccccgcggcttcgctcaacc
acgcacctcccgggccgctgcgcccccgccggccccgcctgcagccgttgggacccacta
actgcctcgaaaagcctaggattcgactttgaatggtccgttaatgtggttacaaaacgt
gactcggttcatcgggagccctcccaccatgaagttggcccctcattgatccaggaagaa
ggcaggaaatctccagaatcagggcttttgccaccaatgttgtctctctggttcttcctc
cagaaatctacctag

>gi568815586r:7714319_7921415|GENSCAN_predicted_peptide_6|260_aa
MGEFSSGFYAKSPFSKEQSFWYLPFGQLRASSASDSHDSSTSPKGKQPTTAEKSATKKED
KVPVKKQKTRTVFSSTQLCVLNDRFQRQKYLSLQQMQELSNILNLSYKQVKTWFQNQRMK
SKRWQKNNWLKNSNGVTQGCLVNPTGNLPMWSNQTWNNSTWSNQTQNIQSWSNHSWNTQT
WCTQSWNNQAWNSPFYNCGEESLQSCMQFQPNSPASDLEAALEAAGEGLNVIQQTTRYFN
TPQTMDLFLNYSMNMQPEDV

>gi568815586r:7714319_7921415|GENSCAN_predicted_CDS_6|783_bp
atgggggaattcagctcaggcttttatgcaaagtcccccttcagcaaagaacaaagcttc
tggtacctgccctttggacagctgcgggcaagctcagcctcggacagccatgattcttcc
accagtcccaaaggcaaacaacccactactgcagagaagagtgccacaaaaaaggaagac
aaggtcccggtcaagaaacagaagaccagaactgtgttctcttccacccagctgtgtgta
ctcaatgatagatttcagagacagaaatacctcagcctccagcagatgcaagaactttcc
aacatcctgaacctcagctacaaacaggtgaagacctggttccagaaccagagaatgaaa
tctaagaggtggcagaaaaacaactggctgaagaatagcaatggtgtgacgcagggatgc
ctggtgaacccgactgggaaccttccaatgtggagcaaccagacctggaacaattcaacc
tggagcaaccagacccagaacatccagtcctggagcaaccactcctggaacactcagacc
tggtgcacccaatcctggaacaatcaggcctggaacagtcccttctataactgtggagag
gaatctctgcagtcctgcatgcagttccagccaaattctcctgccagtgacttggaggct
gccttggaagctgctggggaaggccttaatgtaatacagcagaccactaggtattttaat
actccacaaaccatggatttattcctaaactactccatgaacatgcaacctgaagacgtg
tga

>gi568815586r:7714319_7921415|GENSCAN_predicted_peptide_7|53_aa
MSCRYPKNGTDESSSNKSVFLIGGLRCTGVAETAVLTNVHPLPPVRRPAPSEH

>gi568815586r:7714319_7921415|GENSCAN_predicted_CDS_7|162_bp
atgagctgtagatacccaaagaatggcaccgatgaatcatctagtaacaaatctgtcttt
ttgatcgggggccttcgctgcactggcgtggctgaaactgcggttctcaccaacgtccac
cctcttcctccagttcgccgccctgcccccagcgagcactga