GENSCAN 1.0	Date run:  8-Nov-116	Time: 12:06:32

Sequence gi568815586r:45073416_45274713 : 201298 bp : 39.83% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -   1431   1426    6                               1.05
 1.02 Term -   7572   7352  221  1  2   96   40   167 0.759   8.92
 1.01 Init -  11057  10943  115  2  1   78   50    58 0.218   1.42
 1.00 Prom -  11181  11142   40                              -3.65

 2.02 PlyA -  11192  11187    6                              -3.94
 2.01 Sngl -  12962  11265 1698  2  0   42   37   296 0.529  14.69
 2.00 Prom -  14272  14233   40                              -3.85

 3.00 Prom +  37007  37046   40                              -4.45
 3.01 Init +  37629  37739  111  2  0   40   67   119 0.812   5.26
 3.02 Intr +  60160  60317  158  0  2   83   72   113 0.927   7.09
 3.03 Term +  63197  63935  739  2  1   33   43   237 0.743   5.64
 3.04 PlyA +  65241  65246    6                               1.05

 4.04 PlyA -  65629  65624    6                               1.05
 4.03 Term -  76450  76331  120  1  0  129   42    62 0.434   3.19
 4.02 Intr -  81500  81081  420  2  0   23   14   280 0.081   7.31
 4.01 Init -  93909  93847   63  0  0   95   98    61 0.024   9.00
 4.00 Prom -  97679  97640   40                              -7.45

 5.07 PlyA -  99127  99122    6                               1.05
 5.06 Term - 101005  99775 1231  0  1   -2   48   952 0.012  72.28
 5.05 Intr - 104030 103980   51  1  0   95   81    45 0.010   1.60
 5.04 Intr - 105594 105495  100  1  1   56   36    89 0.012  -1.25
 5.03 Intr - 111315 111026  290  2  2   83   80   141 0.059   8.77
 5.02 Intr - 120202 120166   37  2  1  109   94    20 0.002   1.10
 5.01 Init - 127627 127381  247  1  1   96   41   119 0.088   5.81
 5.00 Prom - 138855 138816   40                              -5.75

 6.05 PlyA - 139098 139093    6                               1.05
 6.04 Term - 142933 142547  387  1  0   76   37   232 0.422  10.85
 6.03 Intr - 143447 143211  237  2  0   42    3   214 0.456   5.19
 6.02 Intr - 143651 143541  111  2  0   55   68   115 0.426   5.86
 6.01 Init - 147754 147698   57  1  0   67   66    65 0.406   3.56
 6.00 Prom - 152940 152901   40                              -4.25

 7.03 PlyA - 153060 153055    6                               1.05
 7.02 Term - 155569 155435  135  1  0  103   55    67 0.899   1.94
 7.01 Init - 155914 155804  111  1  0   78  100    36 0.766   4.06
 7.00 Prom - 158099 158060   40                              -6.05

 8.03 PlyA - 158705 158700    6                               1.05
 8.02 Term - 166563 165833  731  1  2   28   38   317 0.675  13.34
 8.01 Init - 168263 168041  223  2  1   73   72    96 0.925   5.26
 8.00 Prom - 170837 170798   40                              -1.05

 9.00 Prom + 175754 175793   40                              -3.75
 9.01 Init + 180945 181016   72  2  0   72   86    43 0.218   3.77
 9.02 Term + 196889 196993  105  1  0   71   41    84 0.070  -0.57
 9.03 PlyA + 199215 199220    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  51546  51408  139  0  1   85   78    91 0.815   8.15
S.002 Sngl -  90320  89973  348  2  0   46   44   221 0.981   9.29
S.003 Sngl - 100950  99775 1176  0  0   60   48   878 0.978  76.75
S.004 Init + 114307 114416  110  0  2   38   75    74 0.850   0.84
S.005 Term + 117409 117553  145  1  1  106   48   144 0.953   8.60


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:45073416_45274713|GENSCAN_predicted_peptide_1|111_aa
MEYYAAIKRNEIMSFAGTWMKVETISLSKLTQEQKTKHQTRCHVVCFPLEETTWPKMEGG
LQSTASQEVDPTKHQLVGLGAGPPQLSLEMIVAPANTSTGACKGAWAREPS

>gi568815586r:45073416_45274713|GENSCAN_predicted_CDS_1|336_bp
atggaatactatgcagccataaaaaggaatgagatcatgtcctttgcagggacatggatg
aaggtggaaaccattagcctcagcaaactaacacaggaacagaaaaccaaacaccaaacc
aggtgccatgttgtgtgcttccctctggaagagaccacatggccaaaaatggaaggaggt
ctccagtcaacagccagccaggaagtagatcctaccaagcaccagctggtgggcttggga
gcaggtcctccccagttgagccttgagatgattgtagccccagccaacacctctacggga
gcctgcaagggagcttgggccagagaacccagttaa

>gi568815586r:45073416_45274713|GENSCAN_predicted_peptide_2|565_aa
MIISIDAEKAFDKIQQLFMLKTLNKLGIDGTYLKIIRAIYDKPTANIILNGQKLEAFPLK
TGTRQGCPLSPLLFNIVLEVLARAIRQEKEIKGIQLGKEEVKLSLFADDMIVYLENPIVS
AQNLLKLISNLSKVSGYKINLQKSQAFLYTNNRQTESQIMSELPFTIASKRIKYLGIQLT
RDATDLFKENYKPLLNEIKEDTNKWKNIPCSWVGRINIVKMAILPKVIYRFNAIPIKLPM
TSFTELEKTTLNFLWNHKRAHTAKSILSQKNKTGGIMLPDFKLYYKARVTKTAWYWYQNR
DVDQWNRTEPSEIMLHIYNYLIFDKPEKNKQWGKDSLFNKWCWENWLAICRKLKLDPFLT
PYTKINSRWIKDLNVRPKTIKTLEENLGNTIQDIGMGKDFMSKTPKAMATKTKIDKWDLI
QLKSFFCTAKETTIRVNRQPTEWEKIFATYSSDKGLISRIYNELKQIYKKKTNNPIKKWT
NDMNRHFSKEDIYAAKKHMKKCSSLPAIREMQIKTTMRYHLTPVRIAIIKKSGNNRCWKG
CGEIGTLLHCWWDCKLVQPLWKSVW

>gi568815586r:45073416_45274713|GENSCAN_predicted_CDS_2|1698_bp
atgattatctcaatagatgcagaaaaggcctttgacaaaattcaacaactcttcatgcta
aaaactctcaataaattaggtattgatgggacatatctcaaaataataagagctatctat
gacaaacccacagccaatatcatactgaatgggcaaaaactggaagcattccctttgaaa
actggcacaagacagggatgtcctctctcaccactcctattcaacatagtgttggaagtt
ctggccagggcaatcaggcaggagaaggaaataaagggcattcaattaggaaaagaggaa
gtcaaattgtccctgtttgcagatgacatgattgtctatctagaaaaccccattgtctca
gcccaaaatctccttaagctgataagcaacctcagcaaagtctcaggatacaaaatcaac
ttgcaaaaatcacaagcattcttatacaccaataacagacaaacagagagccaaatcatg
agtgaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaacttaca
agggatgcgacagatctcttcaaggagaactacaaaccactgctcaatgaaataaaagag
gatacaaacaaatggaagaacattccatgctcatgggtaggaagaatcaatatcgtgaaa
atggccatacttcccaaggtaatttatagattcaatgccatccccatcaagctaccaatg
acttccttcacagaattggaaaaaactactttaaacttcttatggaaccataaaagagcc
cacactgccaagtcaatcctaagccaaaagaacaaaactggaggcatcatgctacctgac
ttcaaactatactacaaggctagagtaaccaaaacagcatggtactggtaccaaaacaga
gatgtagaccaatggaacagaacagagccctcagaaataatgctgcatatctacaactat
ctgatctttgacaaacctgagaaaaacaagcaatggggaaaggattccctatttaataaa
tggtgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttccttaca
ccttatacaaaaattaattcaagatggattaaagacttaaatgttagacctaaaaccata
aaaaccctagaagaaaacctaggcaataccattcaggacataggcatgggcaaggacttc
atgtctaaaacaccaaaagcaatggcaacaaaaaccaaaattgacaaatgggatctaatt
caactaaagagcttcttctgcacagcaaaagaaactaccatcagagtgaacaggcaacct
acagaatgggagaaaatttttgcaacctactcatctgacaaagggctaatatctagaatc
tacaatgaactcaaacaaatttacaagaaaaaaacaaacaaccccatcaaaaagtggaca
aacgatatgaacagacacttctcaaaagaagacatttatgcagccaaaaaacacatgaaa
aaatgctcatcattaccggccatcagagaaatgcaaatcaaaaccacaatgagataccat
ctcacaccagttagaatcgcgatcattaaaaagtcaggaaacaacaggtgctggaaagga
tgtggagaaataggaacacttttacactgttggtgggactgtaaactagttcaaccattg
tggaagtcagtgtggtga

>gi568815586r:45073416_45274713|GENSCAN_predicted_peptide_3|335_aa
MLDASCHRTSDSKFFSFGVQTGFLTPELAHLVGPCDRDHNSSPAREQNWTENEFDELTEV
GFRKWVITNSSELKEHVLTQSKEAKNLEKRAIKQEKEIKGIQLGKEEVKLSLFADDMIVY
LENPIVSAQNLLKLISKFSKVSGYKINVKNHKHSYTPITEIQIMTELPFTTATKRIKYLG
IQFTRDVKDLFKENYKPLLKEIREDTNKWKNIPCLWIGRINILKMAILPKVIHRFNAIPI
KLPLTFFKELEKTTLNFIWNQKRACIAKTILSKKNKAGGITLPDFKLYHKATVTKTAWYW
YQNRYIDQWNRTEASEITPHIYNHLIFDKPEKNKQ

>gi568815586r:45073416_45274713|GENSCAN_predicted_CDS_3|1008_bp
atgctggatgcttcctgccatcgaacatcggactccaagtttttcagctttggggttcag
actggcttccttactcctgagcttgcacaccttgtgggaccttgtgatcgtgatcacaac
tcctcaccagcaagggaacaaaactggacagagaatgagtttgacgaattgacagaagta
ggcttcagaaagtgggtaataacaaactcctccgagctaaaggagcatgttctaacccaa
agcaaggaagctaagaaccttgaaaaaagggcaatcaagcaagagaaagaaataaagggt
attcaattaggaaaagaggaagtcaaattgtccctgtttgcagatgacatgattgtatat
ttagaaaaccccattgtctcagcccaaaatctccttaagctgataagtaaattcagcaaa
gtttcaggatacaaaatcaatgtgaaaaaccacaagcattcctatacaccaataacagag
atccaaatcatgactgaactcccattcacaactgctacaaagagaataaaatacctagga
atccaatttacaagggatgtgaaggacctcttcaaggagaactacaaaccactgctcaag
gaaataagagaggacacaaacaaatggaaaaacattccatgcttatggataggaagaatc
aatatcctcaaaatggccatactgcccaaagtgattcatagattcaatgctatcccgatc
aagctaccattgactttcttcaaagaattggaaaaaactactttaaatttcatatggaac
caaaaaagagcctgcatagccaagacaatcctaagcaaaaagaacaaagctggaggcatc
acgctacctgacttcaaactataccacaaggctacagtaacaaaaacagcatggtactgg
taccaaaacagatatatagaccaatggaacagaacagaggcctcagaaataacgccacac
atctacaaccatctgatctttgacaaacctgagaaaaacaagcaatag

>gi568815586r:45073416_45274713|GENSCAN_predicted_peptide_4|200_aa
MASVATSSEGEERDVLTCGRREEYHRRVYYPCDIGSNIILFPPGYYEKHHRGVYTICDVG
SNIILSVPGYYQQYHSVVYNPCDIRNNIILSSFGYYEQYRRGVYTPFDVWSNIIVSVTGI
MNNITEGYTPPVILGVISSPPLNIMNSISVAGGVTLPGKMEVLNFQVLVRFPLKGKVCWK
MDKSAVLDTFIDEAFPDHPI

>gi568815586r:45073416_45274713|GENSCAN_predicted_CDS_4|603_bp
atggcctctgtagctacatcctctgaaggggaggaacgtgatgtcctcacatgtggcaga
agggaagaatatcacaggagggtgtactacccctgcgatattgggagtaatatcatcctc
tttccccctggatattatgaaaaacatcaccggggggtttacaccatctgcgatgttggg
agtaatatcatcctttcggtccctggatattaccaacaatatcacagtgtggtgtacaac
ccttgcgatattaggaataatataatcctctcttccttcggatattacgaacaatatcgc
aggggcgtgtacaccccctttgatgtttggagtaatatcatcgtttctgtcactggtatt
atgaacaatatcacagaaggatatacacctcctgtgatattgggagtaatatcctctccc
ccactgaatattatgaacagtatctcggtggcggggggggttacacttcctgggaaaatg
gaagttttaaattttcaggtccttgtaagatttcctttgaaaggaaaggtctgctggaag
atggacaaatctgcagtattagacacgtttattgatgaagctttccctgaccaccctatt
taa

>gi568815586r:45073416_45274713|GENSCAN_predicted_peptide_5|651_aa
MGSPGSPGGGSRAGQGWLAVVGVQLCKCRLRPLACSCYSAAQPHATSRFLSTTFLGKVDA
LVGLGPHSTQLCGSASARQETAGPSPDLRIHRKFRNLQQLPHEWRIKFRSLSLPFKASYN
LLVHPYLLLLVFINTTIARQVSLQLPEHFWLLPSTHYFTLHHLEINFPPLLAPCEPYPCF
KILLREAFPDSGFSSFSTSNISSYSLLACEVSAEKSADNLLEDPLWLDCAKSFSVPRLEK
QNRTQKDKEFAENTENLKTKMSELRLCCDLLVQQVDKTKEVTTTGVSNSEEGIDVGTLLK
STCNTFLKTLEECMQIANAAFTSELLYHTPPGSPQLAMLKSSKMKHPIIPIHNSLERQTE
LSTCENGSLNMEINGEEEILMKNKNSLYLKSAEIDCSISSEENTDDNITVQGEIMKEDRM
ENLKNHDNNLSQSGSDSSCSPECLWEEGKEVIPTFFSTMNTSFSDIELLEDSGIPTEAFL
ASCCAVVPVLDKLGPTVFAPVKMDLVENIKKVNQKYITNKEEFTTLQKIVLHEVEADVAQ
VRNSATEALLWLKRGLKFLKGFLTEVKNGEKDIQTALNNAYGKTLRQHHGWVVRGVFALA
LRATPSYEDFVAALTVKEGDHRKEAFSIGMQRDLSLYLPAMKKQMAILDAL

>gi568815586r:45073416_45274713|GENSCAN_predicted_CDS_5|1956_bp
atggggagccctggcagtcctggtggaggcagtcgtgcaggacaaggatggttggctgtg
gtgggtgtccagctgtgcaagtgcaggctgaggcccctggcctgcagttgctactcagct
gcccagccccacgccacatcccggttcctgagcaccaccttccttggcaaagttgatgcc
cttgttggcctgggtccccattccacacagctgtgtgggtcggcatctgcaagacaggag
actgcgggacctagtccagacctcagaattcacaggaagttcagaaatcttcagcaactc
ccacatgaatggagaataaaattcagatctctgagcctgccattcaaggccagctacaac
ctgcttgttcacccttacctcctacttcttgtcttcataaacactaccatcgccagacag
gtctctttacagcttcctgaacatttctggctccttccatctacccattacttcacatta
catcatctggagatcaactttcctccactcttagccccctgtgaaccttatccctgcttc
aagatccttctccgtgaagcctttccagactcaggtttttcttctttcagtacttcaaat
atatcatcctactcccttttggcttgtgaggtttctgctgaaaaatctgctgataatcta
ctggaggaccccttgtggttagactgtgccaaatctttcagcgttccaagactggaaaaa
cagaataggacccagaaggataaagagtttgctgaaaacactgaaaacttgaaaaccaaa
atgtcagaactaagactctgctgtgacctccttgttcagcaagtagataaaacaaaagaa
gtgaccacaactggtgtgtccaattctgaggagggaattgatgtgggaactttgctgaaa
tcaacctgtaatacttttctgaagaccttggaagaatgcatgcagattgcaaatgcagcc
ttcacctctgagctgctctaccacactccaccaggatcaccacagctggccatgctcaag
tccagcaagatgaaacatcctattataccaattcataattcattggaaaggcaaacggag
ttgagcacttgtgaaaatggatctttaaatatggaaataaatggtgaggaagaaatccta
atgaaaaataagaattccttatatttgaaatctgcagagatagactgcagcatatcaagt
gaggaaaatacagatgataatataaccgtccaaggtgaaataatgaaggaagatagaatg
gaaaacctgaaaaatcatgacaataacttgtctcagtctggatcagactcaagttgctct
ccagaatgcctctgggaggaaggcaaagaagttatcccaactttctttagtaccatgaac
acaagctttagtgacattgaacttctggaagacagtggcattcccacagaagcattcttg
gcatcatgttgtgctgtggttccagtattagacaaacttggccctacagtgtttgctcct
gttaagatggatcttgttgaaaatattaagaaagtaaatcagaagtatataaccaacaaa
gaagagtttaccactctccagaagatagtgctgcacgaagtggaggcggatgtagcccag
gttaggaactcagcgactgaagccctcttgtggctgaagagaggtctcaaatttttgaag
ggatttttgacagaagtgaaaaatggggaaaaggatatccagacagccctgaataacgca
tatggtaaaacattgcggcaacaccatggctgggtagttcgaggggtttttgcgttagct
ttaagggcaactccatcctatgaagattttgtggccgcgttaaccgtaaaggaaggtgac
caccggaaagaagctttcagtattgggatgcagagggacctcagcctttacctccctgcc
atgaagaagcagatggccatactggacgctttataa

>gi568815586r:45073416_45274713|GENSCAN_predicted_peptide_6|263_aa
MNASWASSKSTQFGYYPPAKWVTPGLLPKPQGPSGRVKKALRSSLPGGIPPPITAPSRRS
AFTLTRIQMGHTLSSKCGPAPRTPPRGLAPVPRLLGNPSTLRVGEVTPKLLLSGDFRTQR
RPRSCQAFQGQHPPPQNIPAHLFHVSLRRRLRTWREVGGSRVPERRGSPRGRIGDRGACV
AWAQGPLSPASAGESRAEAPTDRSPEPEDASRLPSGARRLSMPSAAAAARCGMIELPRFY
EARRRKSAGETAEGVVRSCARGN

>gi568815586r:45073416_45274713|GENSCAN_predicted_CDS_6|792_bp
atgaacgccagctgggcgtcctctaaatcaactcaattcggatactatccacctgcaaaa
tgggtcaccccaggtttgctccccaagccccagggcccctcaggacgagtgaaaaaggcc
ctgcggtcctccctgcctgggggaattcctcctccgatcacagctccgagccgtcggtcg
gcttttactttaacgaggattcagatgggtcacaccctgtcctccaaatgcgggcctgct
ccccggaccccgcccagggggctcgccccagtgccgaggctcctgggcaaccctagcact
ctgcgagtcggggaagtgaccccaaagttgcttctgagtggagacttccgcacgcagagg
cgtccccgcagctgccaggcttttcaggggcagcatcccccgccccaaaacattcctgct
catctttttcatgtctccctcagaaggcggctccgaacttggcgcgaagttgggggctcc
cgggttccagaacggcgcggctctcccaggggccggatcggggaccgcggggcgtgtgtc
gcttgggctcaggggccgctgagcccagccagcgccggggaaagccgagccgaggcaccc
accgaccggagcccagagccggaggacgcctctcgcctgccgagcggagcccggagactg
agcatgcccagtgcggccgccgcggctcgctgcggaatgattgaacttccccggttttac
gaggcgcgcagaaggaagtcggcaggcgagactgcagagggagtagtgcgatcctgcgcg
cgggggaactag

>gi568815586r:45073416_45274713|GENSCAN_predicted_peptide_7|81_aa
MGTLKGSQASVEAHFFLNIALHSTYSRVPVHTLGQIKTQVAIDYHSITIVLRLCRDMRVD
EKKVLSQRPKIISNFRRFLEK

>gi568815586r:45073416_45274713|GENSCAN_predicted_CDS_7|246_bp
atgggaacattaaaaggatcacaggccagcgtggaagcccatttcttcctcaacatagct
ctccacagtacatacagcagggtgcctgtccacacccttggccaaattaagacccaagtg
gctatagattaccacagcattaccatagttctgagactgtgcagggatatgagggtggat
gagaagaaggtcctgtctcagagacccaagataatctccaattttagaagattcttagag
aaatga

>gi568815586r:45073416_45274713|GENSCAN_predicted_peptide_8|317_aa
MGRNQSRKAENSKNQSACSPPKDRSSSPAKEQSWTENDFDELTEVGFRMSVITNFSELKV
YVLIHPRKLKTLKKAPYSTYTKIDHIIGSKALLSKCRRTEITTNCLSDHSAIKLELRIKK
LTQNHTTTWKLNNLLLNYWVRNKMKAEIKNKDITYQNLWDTFKAVCRGKFIALNAHKRKQ
ERSKIDTLTSQLKELEKQEQTHSKASRRQEITKIRAELKETETQKTLQKKKINESRSWFS
EKINKIDRPLARLIKKKREKNQIDAIKNDKVDITTNPTGIQTTIREYYKHTHTNKLENLE
EMDKFLDTYNFPRLNQE

>gi568815586r:45073416_45274713|GENSCAN_predicted_CDS_8|954_bp
atgggaagaaaccagagcagaaaagctgaaaattctaaaaaccagagcgcctgttctcct
ccaaaagatcgcagttcctcaccagcaaaggaacaaagctggacggagaatgactttgac
gagttgacagaagtaggcttcagaatgtcggtaataacaaacttctctgagctaaaagtt
tatgttctaatccatccaaggaaactaaaaaccttgaaaaaagcaccatatagcacttat
actaaaattgaccacataattggaagtaaagcactcctcagcaaatgtagaagaacagaa
atcacaacaaactgtctctcagaccatagtgcaatcaaattagaactcaggattaagaaa
ctcactcaaaaccacacaactacatggaaactgaacaacctgctcctgaattactgggta
cgtaacaaaatgaaggcagaaataaagaacaaagacataacgtaccagaatctctgggac
acatttaaagcagtgtgcagagggaaatttatagcactaaatgcccacaagagaaagcag
gaaagatctaaaatcgacaccctaacatcacaattaaaagaactagagaagcaagagcaa
acacattcaaaagctagcagaagacaagaaataactaagatcagagcagaactaaaggaa
acagaaacacaaaaaacccttcaaaaaaaaaaaatcaatgaatccaggagctggttttct
gaaaagatcaacaaaattgatagaccgctagcaagactaatcaagaagaaaagggagaag
aatcaaatagatgcaataaaaaatgataaagtggatatcaccaccaatccaacaggaata
caaactaccatcagagaatactacaaacacacccacacaaataaactagaaaatctagaa
gaaatggataaattcctggacacatacaacttcccaagactaaaccaggaataa

>gi568815586r:45073416_45274713|GENSCAN_predicted_peptide_9|58_aa
MGMLWIIIAWGGSICQIHDFGSVKIRKMRAKMVKWLVRGQVLVVTEAGLMPPPALSAA

>gi568815586r:45073416_45274713|GENSCAN_predicted_CDS_9|177_bp
atggggatgttgtggatcatcattgcctggggaggcagtatctgccagatccatgacttt
ggctcagtgaagataaggaaaatgagagcaaaaatggtcaaatggcttgtacgaggtcag
gtccttgttgttacagaggcaggtctgatgccgcctcctgctctgtctgcagcctaa