GENSCAN 1.0	Date run:  7-Nov-116	Time: 01:13:04

Sequence gi568815586r:31515771_31716439 : 200669 bp : 41.71% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +   2182   2370  189  0  0  126   38   103 0.851   5.57
 1.02 PlyA +   2740   2745    6                               1.05

 2.03 PlyA -   4022   4017    6                               1.05
 2.02 Term -  12583  12416  168  1  0   66   47   112 0.059   1.80
 2.01 Init -  36228  35878  351  0  0   82   86   184 0.053  14.81
 2.00 Prom -  36708  36669   40                             -11.74

 3.02 PlyA -  37079  37074    6                               1.05
 3.01 Sngl -  37908  37168  741  0  0   49   48   293 0.907  17.35
 3.00 Prom -  38001  37962   40                              -6.15

 4.05 PlyA -  38170  38165    6                               1.05
 4.04 Term -  39240  38512  729  0  0  -15   36   475 0.850  24.48
 4.03 Intr -  39691  39502  190  0  1  -13   47   208 0.268   5.27
 4.02 Intr -  74634  74616   19  1  1   67  117    25 0.003  -1.95
 4.01 Init -  75062  74936  127  2  1   81   90   193 0.208  17.17
 4.00 Prom -  75962  75923   40                              -7.15

 5.02 PlyA -  76332  76327    6                               1.05
 5.01 Sngl -  81639  81337  303  0  0   60   38   280 0.944  15.78
 5.00 Prom -  86315  86276   40                              -5.85

 6.02 PlyA -  88960  88955    6                               1.05
 6.01 Sngl - 100669  99998  672  1  0   68   46   693 0.999  57.02
 6.00 Prom - 105811 105772   40                              -4.65

 7.00 Prom + 108414 108453   40                              -4.05
 7.01 Init + 117108 117196   89  2  2   83   12    84 0.003   0.46
 7.02 Intr + 127246 127300   55  1  1   75   94    70 0.010   4.36
 7.03 Intr + 134877 134933   57  2  0  105   88    21 0.032   1.96
 7.04 Intr + 146241 146419  179  2  2   74   48   118 0.149   4.20
 7.05 Intr + 150317 150447  131  2  2   96   66   143 0.997  12.32
 7.06 Term + 151877 152220  344  0  2   69   44   212 0.533   8.59
 7.07 PlyA + 153295 153300    6                               1.05

 8.07 PlyA - 154591 154586    6                               1.05
 8.06 Term - 156607 156534   74  2  2  114   44    54 0.340   0.69
 8.05 Intr - 173348 173237  112  2  1   91   92    24 0.379   2.13
 8.04 Intr - 181647 181591   57  0  0  100   76    74 0.838   5.56
 8.03 Intr - 182187 181970  218  1  2   86   99   130 0.995  11.20
 8.02 Intr - 186237 186093  145  0  1   45   95    84 0.953   3.73
 8.01 Init - 190233 190114  120  0  0   46   97    55 0.591   2.44
 8.00 Prom - 197249 197210   40                              -5.25

 9.02 PlyA - 197257 197252    6                               1.05
 9.01 Term - 199937 199785  153  2  0   23   54   162 0.605   3.24

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 128156 128085   72  2  0   67   80    89 0.851   7.12


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:31515771_31716439|GENSCAN_predicted_peptide_1|62_aa
VDEKVGAPSLNSALHCWNKKPEFPKVDLRAVSAMGAVQSGEAGKELYKLKLWKSETSHIQ
LL

>gi568815586r:31515771_31716439|GENSCAN_predicted_CDS_1|189_bp
gtggatgagaaagtgggggctccttccctcaactcagccttgcattgctggaataaaaag
cctgagttcccaaaggtagatctgcgggcagtctctgcaatgggagcagtgcaaagtgga
gaggcagggaaagagctttataaactgaagctctggaagtcagaaacctctcacattcag
cttctctga

>gi568815586r:31515771_31716439|GENSCAN_predicted_peptide_2|172_aa
MIVYLENPIVSAQNLLKLISNFSKVSGYKIDVQKSQAFFYTNNRQTESQIMSELPFTIAS
KRIKYLGIQLTRDVKGLFKENYKPLLNEIKEDTNKWKNIPCSWVGRINIVKMAILPKREA
KGSLTHAGGSDVKTGRVWSDAAVSQRMRIATRTWKKQEMNFPLDRLEGVRPC

>gi568815586r:31515771_31716439|GENSCAN_predicted_CDS_2|519_bp
atgattgtctatctagaaaaccccatcgtctcagcccaaaatctccttaagctgataagc
aacttcagcaaagtctcaggatacaaaatcgatgtgcaaaaatcacaagcattcttttac
accaataacagacaaacagaaagccaaatcatgagtgaactcccattcacaattgcttca
aagagaataaaatacctaggaatccaacttacaagggatgtgaagggcctcttcaaggag
aactacaaaccactgctcaatgaaataaaagaagatacaaacaaatggaagaacattcca
tgctcatgggtaggaagaatcaatatcgtgaaaatggccatactgcccaagagagaggca
aagggaagtttgacacacgcaggaggaagtgatgtgaagacaggcagagtttggagtgat
gcagctgtaagccaaagaatgcgcatagcaaccagaacttggaagaaacaagaaatgaat
tttcccctagaccgtctggagggagttcggccttgctga

>gi568815586r:31515771_31716439|GENSCAN_predicted_peptide_3|246_aa
MGDFNTPLSTLDRSMTQKVNKDTQELNSALHQVDLIDIYRTLHPKSTEYTFFAAPHHTYS
KIDYIVGSKALLNKCKRTEIITNCLSDHSAIKLGLRIKRLTQKHSTTWKLNNLLLNDYWV
NNEMKAEIKMFLETKENKDTTYQNLWDTFKAVCTGKFIALNVHKRKQERSKIDTLTSQLK
ELEKQEQTHSKASRRQEITKIRAELEEIETKKTLQKINESRTWFFEKINKIDRPLARLVK
KKRRIK

>gi568815586r:31515771_31716439|GENSCAN_predicted_CDS_3|741_bp
atgggagactttaacaccccactgtcaacattagacagatcaatgacacagaaagttaac
aaggatacccaggaattgaactcagctctgcaccaagtggacctaatagacatctacaga
actctccaccccaaatcaacagaatatacattctttgcagcaccacaccacacctactcc
aaaattgactacatagttggaagtaaagcactcctcaacaaatgtaaaagaacagaaatt
ataacaaactgtctctcagaccacagtgcaatcaaactaggactcaggattaagagactc
actcaaaaacactcaactacatggaaactgaacaacctgctcctgaatgactactgggta
aataatgaaatgaaggcagaaataaagatgttccttgaaaccaaggagaacaaagacaca
acataccagaatctctgggacacattcaaagcagtgtgtacagggaaatttatagcacta
aatgtccacaagagaaagcaggaaagatctaaaattgacaccctaacatcacaattaaaa
gaactagaaaagcaagagcaaacacattcaaaagctagcagaaggcaagaaataactaag
atcagagcagaactggaggaaatagagaccaaaaaaacccttcaaaaaattaatgaatcc
aggacctggttttttgaaaagatcaacaaaattgacagaccgctagcaagactagtaaag
aagaaaagaagaatcaaatag

>gi568815586r:31515771_31716439|GENSCAN_predicted_peptide_4|354_aa
MSGSCAAPGPGSGSSPAACRFAHYFVLCGIDADSGLEPDELAAALGGGRGGLTPHTARYS
SETKLPEERSGSSICGSPISAVLQPLLLIPRQTGSGVDLQQTPTDLQLRVLSEEVQTNGK
EVKSFEKKLDEWITRITNAEKSLKDLMELKTKARELRDECRSLSSQCDQLAERVSVMEDE
MNEVKREEKFRAKRIKRSEQSLQEIWDYVKRPNLHLIGVPESDGENGTKLENTLQDIGKL
PQSSKAGQHSNSGNTEDATKILLERATPRHIIVRFTKVEMKEKMLRAAREKGRVTHKGKP
IRLTADLLAEILQARREWGPIFNILKEKNFQPRISYPAKLSFISEGEIKYFTDK

>gi568815586r:31515771_31716439|GENSCAN_predicted_CDS_4|1065_bp
atgagcgggagctgcgcggcgcccggcccgggctcgggctcctccccggccgcctgccgc
ttcgcgcactacttcgtgctgtgcgggatcgacgcggacagcgggctggagcctgacgag
ctggcggccgcactcggaggcggccggggtggactgacacctcacacggccaggtactcc
tctgagacaaaacttccagaagaacgatcaggcagcagcatctgcggttcaccaatatcc
gctgttctgcagccactgctgctgatacccaggcaaacagggtctggagtggacctccag
caaactccaacagacctgcagctgagggtcctgtctgaggaagttcaaaccaatggcaaa
gaagttaaaagctttgaaaaaaaattagatgaatggataactagaataaccaatgcagag
aagtccttaaaggacctgatggagctgaaaaccaaggcacgagagctacgtgacgaatgc
agaagcctcagtagccaatgtgatcaactggcagaaagggtatcagtgatggaagacgaa
atgaatgaagtgaagcgagaagagaagtttagagcaaaaagaataaaaagaagtgaacaa
agcctccaagaaatatgggactatgtgaaaagaccaaatctacatctgattggtgtacct
gaaagtgacggggagaatggaaccaagttggaaaacactctgcaggatataggaaaactt
ccccaatctagcaaggcaggccaacattcaaattcaggaaatacagaggacgcgacaaag
atactcctcgagagagcaactccaagacacataattgtcagattcaccaaagttgaaatg
aaggaaaaaatgttaagggcagccagagagaaaggtcgggttacccacaaagggaagccc
atcagactaacagcagatctcttggcagaaattctacaagccagaagagagtgggggcca
atattcaacattcttaaagaaaagaattttcaacccagaatatcatatccagccaaacta
agcttcataagtgaaggagaaataaaatactttacagacaagtaa

>gi568815586r:31515771_31716439|GENSCAN_predicted_peptide_5|100_aa
MPPAKKGGEKNYSSAISELVTREYTINIHKRIHGVGFKKSAPRALSEIWKFAIKDMGTTD
VHTDTRLNKAVLTKGLRNVPYGIPMLSKIYRQSMWMRTNH

>gi568815586r:31515771_31716439|GENSCAN_predicted_CDS_5|303_bp
atgcctcccgcaaagaagggtggtgagaagaattacagttctgccatcagtgagctggtg
accagagaatataccatcaacattcacaagcgcattcatggagttggtttcaagaagagt
gcccctcgggcactcagcgagatctggaaatttgccatcaaggacatgggaactacggat
gtgcacactgataccaggcttaacaaagctgtcttgaccaaaggattaaggaatgtccca
tatggcatccctatgctttcaaaaatctacagacagtcaatgtggatgagaactaaccac
tga

>gi568815586r:31515771_31716439|GENSCAN_predicted_peptide_6|223_aa
MASKLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKASTEVGEVAKQYIEK
SLLVPDHVITRLMMSELENRRGQHWLLDGFPRTLGQAEALDKICEVDLVISLNIPFETLK
DRLSRRWIHPPSGRVYNLDFNPPHVHGIDDVTGEPLVQQEDDKPEAVAARLRQYKDAAKP
VIELYKSRGVLHQFSGTETNKIWPYVYTLFSNKITPIQSKEAY

>gi568815586r:31515771_31716439|GENSCAN_predicted_CDS_6|672_bp
atggcttccaaactcctgcgcgcggtcatcctcgggccgcccggctcgggcaagggcacc
gtgtgccagaggatcgcccagaactttggtctccagcatctctccagcggccacttcttg
cgggagaacatcaaggccagcaccgaagttggtgaggtggcaaagcagtatatagagaaa
agtcttttggttccagaccatgtgatcacacgcctaatgatgtccgagttggagaatagg
cgtggccagcactggctccttgatggttttcctaggacattaggacaagccgaggccctg
gacaaaatctgtgaagtggatctagtgatcagtttgaatattccatttgaaacacttaaa
gatcgtctcagccgccgttggattcaccctcctagcggaagggtatataacctggacttc
aatccacctcatgtacatggtattgatgacgtcactggtgaaccattagtccagcaggag
gatgataaacccgaagcagttgctgccaggctaagacagtacaaagacgcggcaaagcca
gtcattgaattatacaagagccgaggagtgctccaccaattttccggaacggagacgaac
aaaatctggccctacgtttacacacttttctcaaacaagatcacacctattcagtccaaa
gaagcatattga

>gi568815586r:31515771_31716439|GENSCAN_predicted_peptide_7|284_aa
MDGVGSCYPQQTNTGTENQTPYILDYKRELQIHRSTERLRHLIKLTELNHSGFSVEKRPK
EARRDKEALRSSGLLLFPCGQCPWRGAGSFLDPEIKAFLEENTEVTSSGSLTPEIQLRLL
TPRCKFWYLLDNPDVVRGKSVLDLGSGCGATAIAAKMSGASRILANDIDPIAGMAITLNC
ELNRLNPFPILIQNILNLEQDKWDLVVLGDMFYDEDLADSLHQWLKKCFWTYRTRVLIGD
PGRPQFSGHSIQHHLHKVVEYSLLESTRQENSGLTTSTVWGFQP

>gi568815586r:31515771_31716439|GENSCAN_predicted_CDS_7|855_bp
atggatggagttggaagctgttatcctcagcaaactaacacaggaacagaaaaccaaaca
ccgtatattctcgattataagcgagagctacaaattcaccgaagcacagagaggttacgg
cacttaatcaagctcacagagctaaatcactctggcttttctgttgagaagagaccaaag
gaagcaaggagggataaggaggctctgcgaagcagtggtcttctcttgtttccctgtggc
cagtgtccctggagaggagctggaagctttttggaccctgagataaaggctttcctggag
gagaacactgaagtcaccagcagtggtagcctcacccctgaaatccagttgcggcttttg
acccccagatgcaaattctggtatcttttggataatcctgatgttgtcagaggaaaatct
gtattagatcttgggagtggatgtggagctacagctattgctgctaagatgagtggggca
tcaaggatcttggccaatgacatagaccctattgcaggaatggctattacactaaattgt
gaattgaacagactgaatccttttcctattttaatccaaaacattttgaatttggaacaa
gataagtgggaccttgttgttcttggcgatatgttttatgatgaagaccttgcagatagt
cttcatcagtggctgaagaagtgcttctggacctatagaactcgagtactgattggtgac
cctgggcggccccagttcagtggacacagcattcagcatcacctgcacaaagtggtagaa
tattcacttttggagtctactaggcaggaaaacagtggactgacaacaagcacagtgtgg
ggttttcagccttga

>gi568815586r:31515771_31716439|GENSCAN_predicted_peptide_8|241_aa
MKIHCKGATGRTSKRGPNCQETKACWGFYRMELGLIDSTKILHPEVQTLDLRSCDISDAA
LLHLSNCRKLKKLNLNASKGNRVSVTSEGIKAVASSCSYLHEASLKRCCNLTDEGVVALA
LNCQLLKIIDLGGCLSITDVSLHALGKNCPFLQCVDFSATQVSDSGVIALVSGPCAKKLE
EIHMGHCVNLTDGAVEAVLTYCPQIRILLFHGCPLITDHSREVLEQLVGPNKLKQVTWTV
Y

>gi568815586r:31515771_31716439|GENSCAN_predicted_CDS_8|726_bp
atgaaaatacattgcaagggagcaacgggcagaaccagcaagagaggacccaactgccag
gagacaaaggcttgctggggattttatagaatggaacttgggctgattgacagcaccaag
attttacatcctgaagtccaaactctagatctacggagctgcgatatatcagatgctgct
ctcctgcacctgtctaactgtagaaaactgaagaaattaaatttaaatgcttcaaaaggg
aaccgagtttctgtaacttcagaaggaataaaagctgtggcttcatcttgttcataccta
cacgaagcttctttgaaaagatgctgcaatctcactgacgaaggagtcgttgctcttgca
ctcaattgccagctgctaaagatcatcgatttaggtggctgcttaagtattactgatgtg
tccttacatgcattaggaaaaaactgcccatttttgcagtgtgtcgacttttcagctact
caggtatctgacagtggtgtgattgcacttgttagtggaccttgtgcgaagaaattagag
gagattcatatgggacattgtgtaaatctgactgatggggctgtcgaagctgtccttact
tactgtcctcaaatacgtatattactcttccatggatgccccttgataacagatcattcc
cgagaagtgttggagcaattagtaggcccaaacaaactaaagcaagtgacatggactgtt
tattga

>gi568815586r:31515771_31716439|GENSCAN_predicted_peptide_9|50_aa
IPSKESIPEFLISPPKKKDLSLEEIQNKSEASEERHKPCEAEALKQLAEK

>gi568815586r:31515771_31716439|GENSCAN_predicted_CDS_9|153_bp
ataccatcaaaagaatccatcccagagttccttatttcccctccaaagaagaaagatctt
tccctggaggaaattcagaataaatcagaagcttcagaagaaagacacaagccctgcgaa
gctgaggccttgaagcagcttgctgaaaaatga