GENSCAN 1.0	Date run:  8-Nov-116	Time: 02:40:38

Sequence gi568815586r:122602118_122715576 : 113459 bp : 45.27% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    910   1126  217  0  1   58   86   181 0.873  12.98
 1.02 Intr +   2447   2520   74  0  2   73   89   -18 0.888  -4.07
 1.03 Intr +   2760   2970  211  2  1   20   81   249 0.995  15.89
 1.04 Intr +   3189   3298  110  1  2   37  100    55 0.958   1.60
 1.05 Intr +  10995  11113  119  2  2   96  100    39 0.824   5.16
 1.06 Intr +  11509  11644  136  1  1   69   78    10 0.645  -1.33
 1.07 Intr +  12874  12969   96  0  0   79  115    47 0.955   6.71
 1.08 Intr +  19764  19853   90  2  0   86   71    20 0.529   0.29
 1.09 Intr +  20345  20490  146  1  2   67  115    97 0.989   9.38
 1.10 Intr +  22481  22571   91  2  1   79   98    31 0.695   3.20
 1.11 Intr +  40604  40722  119  1  2   43   89    74 0.053   2.26
 1.12 Intr +  67449  67524   76  0  1   86   95    25 0.034   2.52
 1.13 Term +  69295  69360   66  0  0   86   54    38 0.100  -1.86
 1.14 PlyA +  70454  70459    6                               1.05

 2.02 PlyA -  72489  72484    6                               1.05
 2.01 Sngl -  73866  73528  339  0  0   83   43   259 0.992  16.94
 2.00 Prom -  73966  73927   40                              -3.56

 3.03 PlyA -  74002  73997    6                               1.05
 3.02 Term -  75066  74957  110  1  2    5   55    98 0.156  -3.13
 3.01 Init - 101166 100119 1048  0  1   57  105  1343 0.924 127.19

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:122602118_122715576|GENSCAN_predicted_peptide_1|516_aa
FSLDTLYVSTAKHVFEKKLKPKLLKLTQAKSSTLINKEITKITQTIESCLLSIVNPEWAV
AIAISLAQDIPEGSFKISALKFCLYLAERWLQNIPSQDEKREKAEALLKKLHIQYRRSGT
EAVLIAHKLNTEEYLRVIGKPAHLIVSLYEHPSINQRIQNSSGTDYPDIHAAAKEIAEVN
EINLEKVWDMLLEKWLCPSTKPGETLGMHQLTFAHRTRALQCLFYLADKETIESLFKKPI
EEVKSYLRCITFLASFETLNIPITYELFCSSPKEGMIKGLWKNHSHESMAVRLVTELCLE
YKIYDLQLWNGLLQKLLGFNMNFLGSCDPQVILKQLEEHMNTGQLAGFSHQIRSLILNNI
INKKEFGILAKTKYFQMLKMHAMNTNNITELVNYLANDLSLDEASVLITEYSKHCGKPVP
PDTAPCEILKAVHFSADTDLHYLPGDSMTCHRLPTQCHKTAPVGDANHKCLMNQFILRNV
ERCLIAAFIRKCLTPALVSVFFFVSTRTQGLAPTYK

>gi568815586r:122602118_122715576|GENSCAN_predicted_CDS_1|1551_bp
ttctctctggacactctgtacgtgtctacagcaaaacacgttttcgaaaaaaaactgaag
ccaaagctcctgaagttaacacaagctaaatcctcaacactgattaacaaggaaataact
aagatcacgcagaccatcgaatcctgcttactctctatagtcaacccagagtgggctgta
gctattgccatcagccttgcccaggatatccctgaaggttccttcaagatatctgctttg
aaattctgcctttatttagctgagagatggctacagaatatcccatcgcaggacgaaaaa
cgtgaaaaagccgaggctttgttgaagaagcttcatatccagtaccggcgatcgggcaca
gaagctgtgctcatagcccacaagctgaacactgaggaatatttaagagtgatcggaaag
ccagcacatcttattgtcagtctctacgaacatcctagcatcaatcaaagaattcagaat
tcatctggcacagattatcctgatattcatgcagcagctaaagaaatagccgaagtcaat
gaaattaatttggaaaaagtctgggacatgttgttggaaaaatggctatgcccttcaaca
aaacctggtgaaacattaggtatgcatcagttaacttttgcccatagaactcgagctctt
cagtgtctcttctatttggctgacaaggaaactatagaatctctctttaaaaaacccatt
gaagaagtgaaatcttatttgagatgtataacttttctggcatcatttgagactttgaat
atccccatcacatatgaattattttgcagcagtcctaaagaaggaatgattaagggtctg
tggaaaaaccacagccacgagtccatggcagtaagattggtgactgagctgtgtttagaa
tacaaaatctatgacctgcagctttggaatggactcttgcaaaagcttctgggcttcaat
atgaattttctgggttcctgtgaccctcaggttattttaaagcaattggaagagcatatg
aacacgggccagctagcaggattttcacatcaaattagaagtctgattttgaataatatc
atcaataagaaggagtttgggattttggcaaagaccaaatactttcaaatgttgaagatg
catgcgatgaataccaacaatatcactgagctagtgaactatttggcaaatgacttaagt
ttagatgaagcttcagtcttgataactgaatattcaaagcactgcgggaaacctgtgcct
ccagacactgctccctgtgaaattctgaaggcagttcacttctctgcagacaccgatttg
cactatctgcctggagatagcatgacatgccacaggttaccaacccagtgccacaagact
gcccccgttggagacgccaatcacaagtgcttgatgaatcagtttattctgaggaatgta
gagagatgtctcattgctgctttcattcgcaagtgtctgacccctgccctggtgtctgtg
tttttctttgtgtccacgcgaactcaaggtttagctcccacttataagtga

>gi568815586r:122602118_122715576|GENSCAN_predicted_peptide_2|112_aa
MHLKSCNTTKVCCFTPEPARPRTHQKEETPKTSEHQKEQTPHTLPLRTVTLTARVRGFIL
EVSKTKNPPIPDTLCPKPMAAEAVPPTSTWGFTHVGKHQQPDLTDRVTDQED

>gi568815586r:122602118_122715576|GENSCAN_predicted_CDS_2|339_bp
atgcaccttaagagctgtaacaccacgaaggtctgctgcttcactcctgagccagcgaga
ccacgaacccaccagaaggaagaaactccaaagacatccgaacatcagaaggaacaaact
ccgcacacgctgcctttaagaactgtaacactcaccgcgagggtccgcggcttcattctt
gaagtcagtaagaccaagaacccaccaattccggacacactatgtcccaagcccatggca
gcagaggctgttccacctacttctacctggggatttacccatgtaggaaagcatcaacaa
ccggatttgactgaccgagtgactgaccaagaggattaa

>gi568815586r:122602118_122715576|GENSCAN_predicted_peptide_3|385_aa
MNRHHLQDHFLEIDKKNCCVFRDDFIVKVLPPVLGLEFIFGLLGNGLALWIFCFHLKSWK
SSRIFLFNLAVADFLLIICLPFLMDNYVRRWDWKFGDIPCRLMLFMLAMNRQGSIIFLTV
VAVDRYFRVVHPHHALNKISNRTAAIISCLLWGITIGLTVHLLKKKMPIQNGGANLCSSF
SICHTFQWHEAMFLLEFFLPLGIILFCSARIIWSLRQRQMDRHAKIKRAITFIMVVAIVF
VICFLPSVVVRIRIFWLLHTSGTQNCEVYRSVDLAFFITLSFTYMNSMLDPVVYYFSSPS
FPNFFSTLINRCLQRKMTGEPDNNRSTSVELTGDPNKTRGAPEALMANSGEFYQLLLRGD
SVLAVLTALARSRRLLCLGSLFGRT

>gi568815586r:122602118_122715576|GENSCAN_predicted_CDS_3|1158_bp
atgaatcggcaccatctgcaggatcactttctggaaatagacaagaagaactgctgtgtg
ttccgagatgacttcattgtcaaggtgttgccgccggtgttggggctggagtttatcttc
gggcttctgggcaatggccttgccctgtggattttctgtttccacctcaagtcctggaaa
tccagccggattttcctgttcaacctggcagtggctgactttctactgatcatctgcctg
cccttcctgatggacaactatgtgaggcgttgggactggaagtttggggacatcccttgc
cggctgatgctcttcatgttggctatgaaccgccagggcagcatcatcttcctcacggtg
gtggcggtagacaggtatttccgggtggtccatccccaccacgccctgaacaagatctcc
aatcggacagcagccatcatctcttgccttctgtggggcatcactattggcctgacagtc
cacctcctgaagaagaagatgccgatccagaatggcggtgcaaatttgtgcagcagcttc
agcatctgccataccttccagtggcacgaagccatgttcctcctggagttcttcctgccc
ctgggcatcatcctgttctgctcagccagaattatctggagcctgcggcagagacaaatg
gaccggcatgccaagatcaagagagccatcaccttcatcatggtggtggccatcgtcttt
gtcatctgcttccttcccagcgtggttgtgcggatccgcatcttctggctcctgcacact
tcgggcacgcagaattgtgaagtgtaccgctcggtggacctggcgttctttatcactctc
agcttcacctacatgaacagcatgctggaccccgtggtgtactacttctccagcccatcc
tttcccaacttcttctccactttgatcaaccgctgcctccagaggaagatgacaggtgag
ccagataataaccgcagcacgagcgtcgagctcacaggggaccccaacaaaaccagaggc
gctccagaggcgttaatggccaactccggggaattctaccagcttctactgagaggtgac
agcgtgctggcagtcctcacagcccttgctcgctctcggcgcctcctctgcctgggctcc
ctctttggccgcacttga