GENSCAN 1.0	Date run:  4-Nov-116	Time: 04:07:35

Sequence gi568815586r:108191844_108392960 : 201117 bp : 46.71% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   3990   4371  382  2  1   88   94   313 0.963  28.93
 1.02 Intr +  14446  14560  115  2  1   90   66   205 0.966  18.01
 1.03 Intr +  18278  18466  189  2  0   17   83   315 0.630  22.60
 1.04 Intr +  18623  18813  191  2  2  123   40    81 0.878   6.03
 1.05 Intr +  32896  33017  122  2  2   96  105   188 0.887  21.51
 1.06 Intr +  35147  35314  168  1  0   93  -24   142 0.618   3.64
 1.07 Term +  35817  36101  285  2  0   69   51   514 0.711  41.20
 1.08 PlyA +  36284  36289    6                               1.05

 2.00 Prom +  38364  38403   40                              -5.26
 2.01 Init +  39320  39326    7  1  1   89   78     0 0.927   0.31
 2.02 Intr +  40888  41052  165  2  0  114  100   209 0.896  24.63
 2.03 Intr +  44510  44541   32  0  2   73   81     4 0.418  -3.95
 2.04 Intr +  45041  45076   36  1  0  113   80     2 0.289   0.36
 2.05 Intr +  48464  48701  238  1  1   53   87   479 0.670  41.49
 2.06 Term +  56148  56500  353  1  2  153   44   549 0.998  51.65
 2.07 PlyA +  62986  62991    6                               1.05

 3.02 PlyA -  64048  64043    6                               1.05
 3.01 Sngl -  90521  89931  591  2  0   61   45   326 0.777  21.79
 3.00 Prom -  96228  96189   40                              -5.46

 4.06 PlyA -  99070  99065    6                               1.05
 4.05 Term - 101116  99998 1119  1  0  114   42  1281 0.555 118.13
 4.04 Intr - 118554 118515   40  2  1   96   66    31 0.006  -0.07
 4.03 Intr - 132391 132257  135  0  0   64   99    73 0.154   5.68
 4.02 Intr - 133997 133949   49  0  1  105   46    12 0.015  -3.56
 4.01 Init - 141563 141443  121  2  1   63   60   117 0.440   5.75
 4.00 Prom - 145122 145083   40                              -3.86

 5.00 Prom + 149334 149373   40                              -4.26
 5.01 Init + 157678 157715   38  0  2   65   68    94 0.644   2.72
 5.02 Intr + 159573 159796  224  0  2   87   94    66 0.710   4.87
 5.03 Intr + 169601 169881  281  0  2   60   59    99 0.312   1.40
 5.04 Intr + 174500 174569   70  1  1   65   93    62 0.010   3.15
 5.05 Intr + 176444 176583  140  0  2   86   75    75 0.321   6.18
 5.06 Term + 177801 177926  126  2  0   94   46    30 0.307  -2.32
 5.07 PlyA + 178545 178550    6                               1.05

 6.00 Prom + 196876 196915   40                              -6.06
 6.01 Sngl + 197609 198145  537  1  0   50   36  1015 0.998  88.58
 6.02 PlyA + 199827 199832    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 175893 176022  130  2  1  103   82    75 0.967   8.72


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:108191844_108392960|GENSCAN_predicted_peptide_1|483_aa
MAKLWFKFQRYFRRKPVRFFTFLALYLTAGSLVFLHSGFVGQPAVSGNQANPAAAGGPAE
GAELSFLGDMHLGRGFRDTGEASSIARRYGPWFKGKDGNERAKLGDYGGAWSRALKGRVV
REKEEERAKYIGCYLDDTQSRALRGVSFFDYKKMTIFRCQDNCAERGYLYGGLEFGAECY
CGHKIQATNVSEAECDMECKGERGSVCGGANRLSVYRLQLAQESARRCTALCPSSFEWSC
MRFSLPPTELRLVPAVSLILTSLPPSETELEPEPRLPILIFSEQTVSNDDDGDGSAVFRG
CFRRPDNLSLALPVTAAMLNMSVDKCVDFCTEKEYPLAALAGTACHCGFPTTRFPLHDRE
DEQLCAQKCSAEEFESCGTPSYFIVYQTQRNPHLLLSPLLSPGATRHDDNDGDDDDDDDD
GDDYDDGDDHNDGDDYDDGDDDNGDDSDKSDADSADDSDDESDDDDDGDEKEEEEEAATL
GVS

>gi568815586r:108191844_108392960|GENSCAN_predicted_CDS_1|1452_bp
atggccaagctctggttcaaattccagcggtacttccgccggaaacctgtgcgcttcttt
accttcctggcactctacctgactgctgggagccttgtcttccttcactctggctttgtg
ggccagcccgctgtctcggggaaccaggcgaaccccgctgctgcaggaggcccagctgag
ggtgctgagctgtccttcttgggtgacatgcatctgggcagaggtttccgggacacaggt
gaagcctcaagcattgctcgcaggtacggaccctggttcaagggcaaggatgggaatgag
agagccaagcttggcgactacggtggagcctggagccgagccctcaaggggagggttgtc
cgggagaaggaggaagagcgagccaagtacatcggctgctacctggatgacacccagagt
cgggcccttcgaggagtgtccttttttgactacaaaaagatgaccatcttccgttgccag
gacaactgtgctgaacggggttacctgtatggcgggctggagttcggcgccgagtgctac
tgcggccacaagatccaggcgacgaacgtgagcgaggcagagtgcgacatggagtgcaag
ggcgagcgaggcagcgtgtgcggcggcgccaaccgcctctctgtctaccggctgcagctg
gcccaggagtcggcccgcaggtgtacagccctttgccccagctcctttgaatggtcctgc
atgcgcttttctctccctcccactgagctgcgtctggttccagctgtatccctcattctc
accagtcttcctccttctgaaactgagttggagcctgagcctcgccttcccatcctgatt
ttctcagagcagactgtctctaatgatgatgatggtgatggaagtgcagtgttccggggc
tgcttccgcaggcccgacaacctttccctggccttacccgtgacagctgccatgctgaac
atgtctgtggacaaatgcgtggacttctgcactgagaaggagtacccgctggcagctctt
gcaggcaccgcctgccactgtgggtttcccaccacccgattcccgctccatgacagagag
gatgagcagctctgtgcccagaagtgcagcgcggaggagtttgagagctgcgggactcct
agttacttcattgtgtaccagacacaacggaatccacacttactgttatctcctcttctg
tctcctggggctaccagacatgatgataatgatggtgatgatgatgatgatgatgatgat
ggtgatgattatgatgatggtgatgatcataatgatggtgatgattatgacgatggtgat
gatgataatggtgatgatagtgataagagtgacgctgatagtgctgatgatagtgatgat
gaaagtgatgatgacgatgatggtgatgagaaggaggaagaggaggaggcagcaacactt
ggagtttcttga

>gi568815586r:108191844_108392960|GENSCAN_predicted_peptide_2|276_aa
MGDNRCMDRRFLPGKSKQLIALASFPGAGNTWARHLIELATGFYTGSYYFDGSLYNKVWK
RVHSTSELRPHCPNADSSSALTSPVPHLWLREGFKGERDHWRSGRTICIKTHESGQKEIE
AFDAAILLIRNPYKALMAEFNRKYGGHIGFAAHAHWKGKEWPEFVRNYAPWWATHTLDWL
KFGKKVLVVHFEDLKQDLFVQLGRMVSLLGVAVREDRLLCVESQKDGNFKRSGLRKLEYD
PYTADMQKTISAYIKMVDAALKGRNLTGVPDDYYPR

>gi568815586r:108191844_108392960|GENSCAN_predicted_CDS_2|831_bp
atgggagacaaccgttgcatggacagaaggttcctgccaggcaagtccaagcagctcatt
gctttggccagcttcccaggtgctggcaacacgtgggctcgccacctcattgaattggcc
acaggcttctacactggcagctactacttcgatggctccctctacaacaaagtctggaaa
agggtccactccaccagtgagctgagacctcattgtcctaatgcagactcaagctctgcg
ctcaccagtcctgttcctcacctctggctgcgggaagggtttaaaggtgagcgggaccac
tggcgcagcggacggaccatctgcatcaagacgcacgaaagcggccagaaagagatcgag
gccttcgacgccgccatcctgctcatccgcaacccctacaaagccctcatggctgagttc
aaccgcaagtacggcggccacataggctttgctgcgcatgcccactggaagggcaaagag
tggccagagttcgtgaggaactatgccccgtggtgggccactcacacactggactggctc
aagtttggcaagaaggtgctggtggtgcactttgaggacctgaagcaggacctctttgtc
cagctgggccggatggtcagcctgctgggcgtggctgtcagggaggaccggctgctctgt
gtggagagccagaaggatggcaacttcaagcgctcagggctccggaagctcgagtatgac
ccctatactgcggacatgcagaagaccatctctgcctacatcaagatggtggatgcagcc
ctcaaagggcggaacctaacgggtgtccccgatgactactacccaagatga

>gi568815586r:108191844_108392960|GENSCAN_predicted_peptide_3|196_aa
MLGQLKFEPSLSEKLSRNILEVGTGDKFQTKIMVRASLPRRLHMKPQIRNLMEWMYPGTF
YYNFENRPILSGWNTTWLCYKMKTKKDPSKPPLDARIFGGQVYSKPEHHPEMRFVDWFCN
SRLHRDQDYLVIWYISWSPCSEYAGNVAEFLAKDGKVTLTIFVAHLYYFWEADYQEELHR
WCQKKQSTCQHEDHEL

>gi568815586r:108191844_108392960|GENSCAN_predicted_CDS_3|591_bp
atgctgggtcagctgaaattcgagccctcactgtcagagaagctaagcagaaacatctta
gaggtagggacaggggacaaatttcagacaaagatcatggtcagggcaagcctgccaaga
aggctgcacatgaagcctcagatcagaaacctgatggagtggatgtatccaggcacattc
tactacaactttgaaaacagacccatcctctcaggttggaacaccacctggctgtgctac
aaaatgaaaacaaagaaggacccctcaaagccccctttggacgcaaggatctttggaggc
caggtctattccaagcctgaacaccacccagagatgagattcgtagattggttctgcaac
tcgaggctgcatcgtgaccaggactacctggtcatctggtacatctcctggagtccctgc
tcagagtatgcagggaacgtggcagagttcctggccaaggatggcaaggtcaccctgacc
atcttcgttgcccacctctactacttctgggaagcagattaccaagaggagcttcacaga
tggtgtcagaaaaaacagtccacatgccagcatgaagatcatgaactatga

>gi568815586r:108191844_108392960|GENSCAN_predicted_peptide_4|487_aa
MSGPKERSWALLVESALGLTVFTIDSLWQCWKYQRLTQQGGSGSENWERMWCWWLRCQAT
FPGQLRCACSTTSVITCSSQKKETGKNPVVTRDPKYLSTGDSLSSSNAVPTSATQRMEDE
DYNTSISYGDEYPDYLDSIVVLEDLSPLEARVTRIFLVVVYSIVCFLGILGNGLVIIIAT
FKMKKTVNMVWFLNLAVADFLFNVFLPIHITYAAMDYHWVFGTAMCKISNFLLIHNMFTS
VFLLTIISSDRCISVLLPVWSQNHRSVRLAYMACMVIWVLAFFLSSPSLVFRDTANLHGK
ISCFNNFSLSTPGSSSWPTHSQMDPVGYSRHMVVTVTRFLCGFLVPVLIITACYLTIVCK
LQRNRLAKTKKPFKIIVTIIITFFLCWCPYHTLNLLELHHTAMPGSVFSLGLPLATALAI
ANSCMNPILYVFMGQDFKKFKVALFSRLVNALSEDTGHSSYPSHRSFTKMSSMNERTSMN
ERETGML

>gi568815586r:108191844_108392960|GENSCAN_predicted_CDS_4|1464_bp
atgtctggccccaaggagaggtcttgggctctgctggtggagagtgccctgggcctcact
gtcttcaccatagacagtctctggcaatgttggaagtaccagcggctgactcagcaggga
gggagtggaagtgagaactgggagaggatgtggtgttggtggctgcgctgccaggccaca
tttcctggacagctgagatgtgcttgttctacaacaagcgtgatcacatgcagctcccag
aaaaaagagaccggcaagaacccagtcgtcaccagggaccccaagtacctttccactggg
gacagcctttcctcttccaacgcagtgcccacatcagccacccagagaatggaggatgaa
gattacaacacttccatcagttacggtgatgaataccctgattatttagactccattgtg
gttttggaggacttatcccccttggaagccagggtgaccaggatcttcctggtggtggtc
tacagcatcgtctgcttcctcgggattctgggcaatggtctggtgatcatcattgccacc
ttcaagatgaagaagacagtgaacatggtctggttcctcaacctggcagtggcagatttc
ctgttcaacgtcttcctcccaatccatatcacctatgccgccatggactaccactgggtt
ttcgggacagccatgtgcaagatcagcaacttccttctcatccacaacatgttcaccagc
gtcttcctgctgaccatcatcagctctgaccgctgcatctctgtgctcctccctgtctgg
tcccagaaccaccgcagcgttcgcctggcttacatggcctgcatggtcatctgggtcctg
gctttcttcttgagttccccatctctcgtcttccgggacacagccaacctgcatgggaaa
atatcctgcttcaacaacttcagcctgtccacacctgggtcttcctcgtggcccactcac
tcccaaatggaccctgtggggtatagccggcacatggtggtgactgtcacccgcttcctc
tgtggcttcctggtcccagtcctcatcatcacagcttgctacctcaccatcgtgtgcaaa
ctgcagcgcaaccgcctggccaagaccaagaagcccttcaagattattgtgaccatcatc
attaccttcttcctctgctggtgcccctaccacacactcaacctcctagagctccaccac
actgccatgcctggctctgtcttcagcctgggtttgcccctggccactgcccttgccatt
gccaacagctgcatgaaccccattctgtatgttttcatgggtcaggacttcaagaagttc
aaggtggccctcttctctcgcctggtcaatgctctaagtgaagatacaggccactcttcc
taccccagccatagaagctttaccaagatgtcatcaatgaatgagaggacttctatgaat
gagagggagaccggcatgctttga

>gi568815586r:108191844_108392960|GENSCAN_predicted_peptide_5|292_aa
MGEVGALALGLGGACSAAAGCLLVHTFPHSFCVMLRREKGNGSPKKLPSIQQKKPVNHTR
QKDVTRPRNHSPQKDSYICSDAFLQDAERGSQQARLQSVTAYILYRVPHSPQAQHQWGGV
DLPPSEGIAKTHHKGINTCMGTERMLHRQREKSGWDIASVEASVNPTENAGAEMILQSQE
EDAHIITFTKSSRKGIASHRLEREAAPGTFHRTLGPQGTQFANHYSSQMEKQAQKGKCLA
RRRCKGDAPSQLPLGSGHQLQCQCWWEAPSITHQQTRARVGCHMPHSNHTAK

>gi568815586r:108191844_108392960|GENSCAN_predicted_CDS_5|879_bp
atgggagaagtgggggcgctggccctgggcctgggtggtgcctgctctgcagcagctggc
tgcctcctggtccatacatttccacattccttttgtgtgatgttgaggagagagaaagga
aatgggagccccaagaagttacctagcattcagcaaaagaaacctgtgaatcacacacgc
caaaaagatgtcactcgccccagaaatcactcaccccagaaagattcctatatctgctca
gatgcattccttcaggacgcagaacgggggagccaacaggcaaggctacagtctgttacc
gcatatattctctatagagttcctcatagcccccaggcccaacaccagtggggtggagta
gacttaccccctagtgaaggcattgcaaagacacatcacaaaggaatcaacacctgcatg
gggacagaaaggatgctgcatcggcagagggagaaatctggctgggacatagcctcagtg
gaggcttctgttaaccccacagagaatgctggagctgagatgatcctacagagccaggaa
gaggatgctcacatcatcaccttcacgaaaagcagcagaaagggaattgcttctcaccga
cttgagcgtgaagcagccccagggaccttccacagaactctggggccccagggaacccag
tttgcaaaccactactctagtcagatggagaaacaggcccagaagggaaaatgtctggca
aggaggcgatgcaaaggtgatgccccttcccagcttcccttgggttctggacaccagctc
cagtgccagtgctggtgggaagctccgagcatcacccaccaacagaccagagccagagtg
ggctgccacatgccacacagcaaccacacagcaaaataa

>gi568815586r:108191844_108392960|GENSCAN_predicted_peptide_6|178_aa
MITTTTIIITIITTTNTIMIITITIIIIPIIIIISAITTIISTIPTITINISITIITTTI
ITTIIIITTTIITITTTITITTTIITITIIIIPIIIIITTITTIITTIPTITVIIIITII
TITIITTIIIIITTIITITTTIITIIITTMTTIITIILIITTTIIIMAVLLIFMSLTL

>gi568815586r:108191844_108392960|GENSCAN_predicted_CDS_6|537_bp
atgatcactaccaccaccatcatcatcaccattatcaccactaccaacactatcatgatc
atcactatcaccattattatcatccccatcatcattatcatttcagccatcaccaccatc
atcagcactatccccaccatcaccatcaacatcagcatcactattatcaccaccaccatt
atcacaaccatcatcattatcaccaccaccattatcaccattaccaccacaatcactatc
actaccaccatcatcaccatcaccattattatcatccccatcattattatcattacgact
atcaccaccatcatcaccactatccccactattacagtcatcatcatcatcactatcatc
accatcaccattatcacaaccatcatcattatcatcaccaccattatcaccattactacc
actatcatcaccatcataatcaccacaatgaccaccatcatcaccatcatcctcatcatc
accaccaccatcatcatcatggcagtattactcatttttatgagcttgacactgtaa