GENSCAN 1.0	Date run:  4-Nov-116	Time: 19:48:00

Sequence gi568815586r:106877560_107078714 : 201155 bp : 39.40% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +   8345   8456  112  2  1  113   42   162 0.687  11.15
 1.02 PlyA +   8878   8883    6                               1.05

 2.00 Prom +   9602   9641   40                              -6.25
 2.01 Sngl +  13632  14126  495  2  0   42   41   216 0.209   8.12
 2.02 PlyA +  14336  14341    6                              -0.45

 3.05 PlyA -  14624  14619    6                               1.05
 3.04 Term -  16750  16611  140  2  2   23   54   106 0.355  -2.16
 3.03 Intr -  18276  18107  170  2  2   47   85   242 0.441  18.47
 3.02 Intr -  24606  24434  173  0  2   57   27   242 0.247  12.82
 3.01 Init -  24779  24681   99  2  0   96   13    87 0.153   2.32
 3.00 Prom -  24885  24846   40                              -8.35

 4.00 Prom +  25092  25131   40                              -6.35
 4.01 Sngl +  25488  25934  447  2  0   65   42   327 0.475  21.77
 4.02 PlyA +  26439  26444    6                               1.05

 5.04 PlyA -  26482  26477    6                               1.05
 5.03 Term -  36065  35819  247  1  1   67   50   155 0.767   3.88
 5.02 Intr -  36339  36223  117  2  0  109   27   150 0.687   9.66
 5.01 Init -  38235  38078  158  0  2   53   97    53 0.484   2.16
 5.00 Prom -  61663  61624   40                              -4.95

 6.00 Prom +  71828  71867   40                              -4.25
 6.01 Sngl +  77800  77997  198  0  0   69   38   281 0.879  16.12
 6.02 PlyA +  79102  79107    6                               1.05

 7.00 Prom +  82964  83003   40                              -7.55
 7.01 Init +  86527  86582   56  0  2   77  100    30 0.460   3.91
 7.02 Intr +  87525  87606   82  0  1   28  115    54 0.728   0.82
 7.03 Intr +  89552  89621   70  1  1   86  115    78 0.794   8.14
 7.04 Term +  93546  93832  287  1  2   79   44   323 0.991  21.58
 7.05 PlyA +  96403  96408    6                               1.05

 8.02 PlyA -  97116  97111    6                               1.05
 8.01 Sngl - 101155  99998 1158  1  0   83   44   442 0.535  33.25
 8.00 Prom - 106888 106849   40                              -8.05

 9.00 Prom + 107135 107174   40                              -6.55
 9.01 Init + 107726 107816   91  1  1   84    7    61 0.570  -3.18
 9.02 Term + 109486 109844  359  2  2   98   43   344 0.871  24.59
 9.03 PlyA + 109855 109860    6                              -0.45

10.12 PlyA - 110208 110203    6                               1.05
10.11 Term - 110560 110394  167  2  2   32   41   140 0.032   0.80
10.10 Intr - 119827 119735   93  2  0  105  100    86 0.926  10.52
10.09 Intr - 120131 119929  203  1  2   82   77   136 0.979   9.91
10.08 Intr - 120420 120356   65  0  2   68   99     7 0.567  -3.60
10.07 Intr - 122303 121992  312  2  0   85  115    92 0.984   7.06
10.06 Intr - 122523 122383  141  0  0  111   61    93 0.996   8.53
10.05 Intr - 123809 123721   89  0  2  101   16    55 0.980  -1.63
10.04 Intr - 124389 124205  185  2  2   79   95   184 0.998  16.71
10.03 Intr - 127689 127547  143  0  2   88   89   129 0.965  11.23
10.02 Intr - 144633 144525  109  2  1  110   86    78 0.899   9.17
10.01 Init - 159013 158925   89  1  2   23   64    86 0.135  -0.14
10.00 Prom - 162574 162535   40                              -4.65

11.03 PlyA - 163713 163708    6                               1.05
11.02 Term - 165619 165455  165  1  0   93   37    89 0.703   1.23
11.01 Init - 165734 165657   78  2  0   92   98    50 0.973   7.51

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:106877560_107078714|GENSCAN_predicted_peptide_1|37_aa
XEELLKPMGLKPDGTITPLEEALNQYSVIEETSSDTD

>gi568815586r:106877560_107078714|GENSCAN_predicted_CDS_1|114_bp
nnagaggagttgcttaaaccaatgggactaaaacctgatgggacaataacgcctttggag
gaagcactcaaccagtactctgtcatcgaagagaccagctctgacacagactaa

>gi568815586r:106877560_107078714|GENSCAN_predicted_peptide_2|164_aa
MGKRFTEHKLLSMMETAIPCLVIGHMSSSLSGMKRTPPGRALWLPYREWIDAGTDRRDQT
ESCCLYLGGASRAWIRTLAVDVEKGMDSRNISKIKETHFDLGERQERAHLTHENENVRRK
DHLNHWLLTCELNNSGFGSRRIELRVNSRSLQMCMVTKHYLYTK

>gi568815586r:106877560_107078714|GENSCAN_predicted_CDS_2|495_bp
atgggcaaaaggtttacagaacacaagttgttgagtatgatggaaacagctatcccatgt
ctcgtgattggacacatgagcagcagcctttcaggcatgaaaaggaccccaccaggaaga
gcactctggctgccgtatagagaatggattgatgcagggacagacagaagagaccagaca
gaaagctgttgcctctacctgggaggggcaagtagggcctggattagaacactggcagta
gacgtagaaaaggggatggactcaagaaatatttcaaagataaaagaaacacactttgat
cttggagaaaggcaagaaagagctcatttaactcatgagaatgagaatgttcggagaaaa
gatcatctgaaccattggctcctaacctgtgaactaaacaactctgggtttgggagtagg
agaatagagttaagagttaattcaaggagtctgcaaatgtgtatggtcaccaaacattat
ttatataccaaataa

>gi568815586r:106877560_107078714|GENSCAN_predicted_peptide_3|193_aa
MGFRDLKSPASLQVLNDYLVDKSYIEGMCHHKHIKSYEKEKASLPGVKKAVGRYGPAKVE
DTTGSGATNSKDDDEIDLLGSDEEESEEAKSSVPAVTALSDDDDDDDNDDGYDDSKPFCA
SLEKLQAVLYQLEKNSLSTPLLNTVKTGSRSPVSLSSASTSCPTGRSSGAMACMELSSPV
IAMPSGIPPEGPA

>gi568815586r:106877560_107078714|GENSCAN_predicted_CDS_3|582_bp
atgggtttcagagatctgaaaagcccggctagcctccaggtgctcaacgattacctggtg
gacaagagctacatcgagggtatgtgccatcacaagcacatcaagtcttatgaaaaggaa
aaggccagcctgccaggagtgaagaaagctgtgggcaggtatggtcctgctaaggtggaa
gacactacaggaagtggagctacaaatagtaaagatgatgatgaaattgatctccttgga
tctgatgaggaggaaagtgaagaagcaaagagttcagttcctgctgttacggctttgtct
gatgatgatgatgatgatgataacgatgatggttatgatgatagcaagcctttttgtgca
agcttagaaaaactccaggccgttttgtaccagttagaaaaaaactccctttccacacct
ctcctaaacacagtcaagactgggtcaagatccccagtatcactgtcttccgcctccaca
tcctgtcccactggaaggtcttcaggggcaatggcatgcatggagctgtcatctcctgtg
atagcaatgccttctggaataccccctgaaggacctgcctga

>gi568815586r:106877560_107078714|GENSCAN_predicted_peptide_4|148_aa
MPMMTVMMLPVRLRERKDERTTRDPRGLEAAEKGPQEIPIPCKLSFVIRHRALLDHTDGI
LIQPRFCKRSKKFLQGVGIEGSSINKNKCTFQEAAKALTFPDYALEVPVYTRLDSRATWI
REPMVQLDHPACSGHPPREWSARIQVQI

>gi568815586r:106877560_107078714|GENSCAN_predicted_CDS_4|447_bp
atgccgatgatgacggtgatgatgctgccagtgcgtctcagagagagaaaggacgaacgc
acaacccgggatccaaggggcctggaagctgctgagaaaggccctcaggaaatcccaata
ccgtgcaaattgagctttgtaataaggcacagggcacttttggatcacacggacgggatt
cttatccagcctaggttctgcaagagatcaaaaaagttcctccaaggagtgggcatagaa
gggagcagtataaataaaaataaatgcacattccaagaagctgctaaagctctaaccttt
ccggactacgctttggaagtgccagtttacaccaggctcgacagtcgagccacttggatc
cgagagcccatggtccagctggaccacccagcctgctcaggacacccgcctcgcgagtgg
agcgctaggattcaggtccagatctga

>gi568815586r:106877560_107078714|GENSCAN_predicted_peptide_5|173_aa
MSLSRNSRESGQSLVMSVVPADRGVGATVPEAGMALYVPGQHNWRAGSWGARRTGDSLRL
SVSNKRGFVRRTVGSEGGPGHGVTCICAKQQGHLRAGASWQVRSSEENGAFLRLFPGTTS
LDIWGDEKRKRQGIACSSGSISVSVVERQKGSSCGSATYQPYIRSLTYSRHCE

>gi568815586r:106877560_107078714|GENSCAN_predicted_CDS_5|522_bp
atgtcattgagcagaaactccagggagagtgggcagagccttgtcatgtcagtggtccca
gcagacagaggagtaggagcaacagtcccagaggcgggaatggccttgtatgttcctggc
cagcacaactggagagcagggagctggggggccagaaggactggcgactctctgagactc
agcgtttccaacaagcggggctttgtcagaagaactgtgggctccgagggaggccctggt
catggggtcacctgcatttgtgcgaagcagcaggggcacctgcgggccggggcttcttgg
caggtgagaagcagcgaggagaatggggcttttctcagactgttccctggaacaacatct
cttgacatctggggagatgagaagcggaaaagacaaggcattgcgtgttcatctgggtcc
ataagcgtctcggtggtggagaggcagaaagggagctcatgtggaagcgctacttaccag
ccttacatccggagcttaacatattccagacactgtgaatga

>gi568815586r:106877560_107078714|GENSCAN_predicted_peptide_6|65_aa
MQGRLTSLDEESAGETGDRPTFPKAKALNSEDRYSARNAGTADVKTPGLGAAAYASPGLR
APRPI

>gi568815586r:106877560_107078714|GENSCAN_predicted_CDS_6|198_bp
atgcaagggaggttgacgtccctggacgaagaaagtgctggagaaactggcgaccgtccc
accttccctaaggcgaaggctctgaattccgaagaccgttactcggcgcggaacgcgggc
accgccgacgtcaaaacaccgggcctgggggccgcggcctacgcgtctcccgggcttcgc
gcccctcgcccgatttga

>gi568815586r:106877560_107078714|GENSCAN_predicted_peptide_7|164_aa
MNKLDKGVCPLEINCPAGKPHSLSSSPTALDATLPHFTGCSFLLIQEIMNQTDKNQQEIP
SYLNDEPPEGSMKDHPQQQPGMLSRVTGGIFSVTKGAVGATIGGVAWIGGKSLEVTKTAV
TTVPSMGIGLVKGGVSAVAGGVTAVGSAVVNKVPLTGKKKDKSD

>gi568815586r:106877560_107078714|GENSCAN_predicted_CDS_7|495_bp
atgaacaaattggacaaaggtgtctgtcctcttgaaattaattgtccagcagggaaacct
cactctttgtcttcctctcctactgcccttgatgcgaccctgccacactttactggctgt
tccttcttgctgatccaggagatcatgaatcagacagataaaaatcaacaagaaatccca
tcataccttaatgatgaaccaccagaaggttcaatgaaagatcacccacagcagcagcca
ggcatgttgtcccgtgtgactgggggtatcttcagtgttacaaagggagctgttggtgcc
accattggtggtgtggcttggattggtggaaagagtctggaagtgaccaaaacagctgtt
acaactgtgccttccatgggaatagggctggtgaaagggggtgtctctgctgtggctgga
ggtgttacagctgttgggtctgctgttgtaaacaaagtgcccttaacaggaaagaagaaa
gacaaatctgactga

>gi568815586r:106877560_107078714|GENSCAN_predicted_peptide_8|385_aa
MLWKLLLRSQSCRLCSFRKMRSPPKYRPFLACFTYTTDKQSSKENTRTVEKLYKCSVDIR
KIRRLKGWVLLEDETYVEEIANILQELGADETAVASILERCPEAIVCSPTAVNTQRKLWQ
LVCKNEEELIKLIEQFPESFFTIKDQENQKLNVQFFQELGLKNVVISRLLTAAPNVFHNP
VEKNKQMVRILQESYLDVGGSEANMKVWLLKLLSQNPFILLNSPTAIKETLEFLQEQGFT
SFEILQLLSKLKGFLFQLCPRSIQNSISFSKNAFKCTDHDLKQLVLKCPALLYYSVPVLE
ERMQGLLREGISIAQIRETPMVLELTPQIVQYRIRKLNSSGYRIKDGHLANLNGSKKEFE
ANFGKIQAKKVRPLFNPVAPLNVEE

>gi568815586r:106877560_107078714|GENSCAN_predicted_CDS_8|1158_bp
atgttgtggaagctgctgctgagatcccagtcctgcaggctgtgttctttcagaaagatg
cgatcacctccaaaatacagacctttcttagcatgcttcacctatacaactgataaacag
tcgagcaaagaaaatacaagaacagtggaaaagctctataaatgttcagttgacattagg
aaaattcgtagattaaaaggatgggtacttttagaggatgaaacctatgttgaagaaatt
gcgaatattttacaagaactaggtgccgatgagactgctgtagccagtattttggaacgc
tgcccggaagcaattgtctgtagtccaaccgctgttaacacccagagaaaactctggcag
ttggtctgcaaaaatgaggaagagttaatcaagttaatagagcagtttccagaatctttc
tttactattaaagaccaagagaaccagaagctgaatgttcagttctttcaagagttggga
ctaaaaaatgtggtcattagcagacttttgacagctgcacctaatgtttttcataatcct
gttgagaagaataagcaaatggtaagaattctccaagagagttatctagatgtaggtggc
tctgaggccaacatgaaagtttggctactaaaattgttaagccaaaacccatttattttg
ttaaattctcccacagctataaaggaaacactagaatttctccaggagcaaggtttcacc
agctttgaaattctccagcttctatccaaactcaaaggatttctttttcaactttgccca
agaagtatacagaatagtatttccttctctaaaaatgcttttaaatgcacagatcatgac
ctgaagcaattagttttgaaatgtcctgcccttttatattattctgttccagttttagaa
gagagaatgcaaggattattgagagaaggaatttccatagctcagataagagagacgcca
atggttcttgaattaacaccacagatagtacagtacaggataaggaaactgaattcctca
ggctacagaataaaggatggacatctagcaaatctaaatggatcaaaaaaagagtttgaa
gctaattttggcaaaattcaggccaaaaaagtaaggccattatttaaccctgtggcacca
ttaaatgttgaagaatga

>gi568815586r:106877560_107078714|GENSCAN_predicted_peptide_9|149_aa
MAYKASLGSATTLIPISLSCTSCICFLSVPASPQSAVPEAWSRDFGPRSQEAPDSSQQRQ
PGHQSLRPWPIRAREMTANPRPPKTRPRVPTQPVRARDTTTRPSPHHEGESEWESAFQAA
QPVLAGASGIFTPFPSQHFRKRSSSSFDA

>gi568815586r:106877560_107078714|GENSCAN_predicted_CDS_9|450_bp
atggcctacaaggcctctttgggctctgccaccaccctaattcccatttccctctcctgc
accagctgcatttgcttcctgtcagtccctgcctccccacagtccgcagtccccgaggcc
tggagccgggatttcggtcctcggtctcaagaagctcccgacagttctcagcagcgccaa
ccaggccatcagtcccttcgcccatggccaatcagggctcgggagatgaccgccaacccc
cgcccccccaagacacgcccccgcgtcccaacgcagccagtcagagcgcgggacacaact
acgcgtccctccccgcaccacgagggcgagtcggagtgggaatcggctttccaggcagcc
cagcctgtgctggcgggggcatctggcattttcacaccctttccttcccagcattttagg
aagcggagttccagtagctttgacgcttag

>gi568815586r:106877560_107078714|GENSCAN_predicted_peptide_10|531_aa
MDWEVIAVGDFVHRDDMTTWHLGEDWTGWQFLLQCLEDLDANLRKLNSRLFVIRGQPADV
FPRLFKEWNITKLSIEYDSEPFGKERDAAIKKLATEAGVEVIVRISHTLYDLDKIIELNG
GQPPLTYKRFQTLISKMEPLEIPVETITSEVIEKCTTPLSDDHDEKYGVPSLEELGFDTD
GLSSAVWPGGETEALTRLERHLERKAWVANFERPRMNANSLLASPTGLSPYLRFGCLSCR
LFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNNPRFDKMEGNPICVQIPWDKN
PEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKFFHC
YCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPEGIQKVAKCLIGVNYPKPMVN
HAEASRLNIERMKQIYQQLSRYRGLGLLASVPSNPNGNGGFMGYSAENIPGCSSSGRCEG
SLYASATDGRTVHSVLRTPDSRHLQLGKPVFLTPTPHKQNHQAQLRAPCPR

>gi568815586r:106877560_107078714|GENSCAN_predicted_CDS_10|1596_bp
atggactgggaagtcattgcagttggagactttgttcatagagatgacatgaccacttgg
catctgggtgaagactggactggatggcaatttttgcttcagtgtcttgaggatcttgat
gccaatctacgaaaattaaactcccgtctgtttgtgattcgtggacaaccagcagatgtg
tttcccaggcttttcaaggaatggaacattactaaactttcaattgagtatgattctgag
ccctttggaaaggaacgagacgcagctattaagaaactggcaactgaagctggagtagaa
gtcattgtaagaatttcacatacattatatgacctagacaagatcatagaactcaatggt
ggacaaccgcctctaacttataaaagattccagactctcatcagcaaaatggaaccacta
gagataccagtagagacaattacttcagaagtgatagaaaagtgcacaactcctctgtct
gatgaccatgatgagaaatatggagtcccttcactggaagagctaggttttgatacagat
ggcttatcctctgcagtgtggccaggtggagaaactgaagcacttactcgtttggaaagg
catttggaaagaaaagcttgggtggcaaattttgaaagacctcgaatgaatgcgaattct
ctgcttgcaagccctactggacttagtccttatctccgatttggttgtttgtcatgtcga
ctgttttacttcaaactaacagatctctacaaaaaggtaaagaagaacagttcccctccc
ctttccctttatgggcaactgttatggcgtgaatttttctatacagcagcaacaaataat
ccacgctttgataaaatggaaggaaaccctatctgtgttcagattccttgggataaaaat
cctgaggctttagccaaatgggcggaaggccggacaggctttccatggattgatgccatc
atgacacagcttcgtcaggagggttggattcatcatctagccaggcatgcagttgcttgc
ttcctgacacgaggggacctgtggattagttgggaagaaggaatgaagttttttcactgc
tattgccctgttggttttggtaggagaacagatcccaatggagactatatcaggcgttat
ttgcctgtcctaagaggcttccctgcaaaatatatctatgatccctggaatgcaccagaa
ggtatccaaaaggtagccaaatgtttgataggagttaattatcctaaaccaatggtgaac
catgctgaggcaagccgtttgaatatcgaaaggatgaaacagatctatcagcagctttca
cgatatagaggactaggtcttctggcatcagtaccttctaatcctaatgggaatggaggc
ttcatgggatattctgcagaaaatatcccaggttgtagcagcagtggaaggtgcgagggc
agtctgtatgccagtgccaccgacggcagaactgtgcacagtgtgctacgaacacctgac
agcagacacctccagctgggaaaaccagttttcctgactccaactccacacaaacagaat
caccaggcccagctcagggcaccctgtcctcgataa

>gi568815586r:106877560_107078714|GENSCAN_predicted_peptide_11|80_aa
MTAQSGQGTVFARGKILLQLKHKGGGERKLGLGMLDHLAGAVVQLHLSLRDEGESRLLTA
RARHPPAIVPILRWHSVVAL

>gi568815586r:106877560_107078714|GENSCAN_predicted_CDS_11|243_bp
atgactgctcagagtggccaaggtactgtttttgcaagaggcaagatactacttcagctc
aagcacaagggtggaggggaaaggaagcttggcttggggatgttggaccacttggctggg
gcggtggttcagttgcatcttagtctcagagatgaaggagagtcacggctactcaccgcc
agagcaagacaccctccagccatagttccaattctacgatggcatagcgtagtagccctg
tag