GENSCAN 1.0	Date run:  3-Nov-116	Time: 21:32:49

Sequence gi568815586f:7939833_8152847 : 213015 bp : 43.44% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  10579  10628   50  0  2  100   45    90 0.735   4.32
 1.02 Intr +  17158  17240   83  1  2   91   90    17 0.750   1.48
 1.03 Term +  41620  41705   86  2  2   80   41    89 0.190   1.22
 1.04 PlyA +  42338  42343    6                               1.05

 2.00 Prom +  61281  61320   40                              -4.56
 2.01 Init +  61704  61796   93  2  0   62   84    82 0.496   5.58
 2.02 Intr +  70264  70379  116  0  2   43   60   161 0.568   8.05
 2.03 Intr +  75176  75407  232  2  1   62   31    74 0.186  -3.12
 2.04 Intr +  75458  75846  389  1  2  -34   36   455 0.351  21.69
 2.05 Intr +  78947  79046  100  2  1   55   69    97 0.546   4.61
 2.06 Intr +  79538  79599   62  1  2   71   86    20 0.282  -2.37
 2.07 Intr +  86528  86622   95  2  2   32   38   148 0.103   3.81
 2.08 Intr +  99987 100333  347  1  2  124   81   420 0.791  40.01
 2.09 Intr + 102826 102900   75  0  0  127  116    71 0.999  13.51
 2.10 Intr + 103869 103937   69  2  0   56   95    51 0.794   1.98
 2.11 Intr + 104928 105126  199  2  1   85  113   117 0.999  12.82
 2.12 Intr + 108050 108457  408  0  0  103   97   284 0.996  25.04
 2.13 Intr + 108865 108966  102  2  0   98   92    39 0.978   5.45
 2.14 Intr + 109530 109739  210  1  0   85   79   193 0.997  16.98
 2.15 Intr + 110690 110788   99  0  0   99  110    16 0.969   4.98
 2.16 Term + 112930 113018   89  2  2   98   39   127 0.950   6.62
 2.17 PlyA + 113673 113678    6                               1.05

 3.02 PlyA - 114615 114610    6                               1.05
 3.01 Sngl - 120275 118905 1371  2  0   58   48   461 0.754  33.23
 3.00 Prom - 122679 122640   40                              -5.36

 4.00 Prom + 124558 124597   40                              -7.06
 4.01 Init + 140117 140274  158  1  2   67   94    80 0.659   5.88
 4.02 Intr + 141802 141931  130  1  1   44   56    80 0.496   1.10
 4.03 Intr + 142292 142551  260  1  2   74   79   232 0.586  17.16
 4.04 Intr + 150104 150204  101  2  2  110   89    66 0.999   8.65
 4.05 Intr + 150363 150467  105  1  0   74   99   138 0.987  13.69
 4.06 Intr + 151937 152018   82  0  1   70   89    85 0.991   5.50
 4.07 Intr + 152844 152952  109  0  1   62   84   108 0.998   8.09
 4.08 Term + 156210 156326  117  2  0  117   55    56 0.670   3.74
 4.09 PlyA + 158015 158020    6                               1.05

 5.03 PlyA - 158043 158038    6                               1.05
 5.02 Term - 167878 167559  320  2  2   52   37   150 0.772   1.34
 5.01 Init - 173495 173363  133  2  1   78   75    59 0.449   3.90
 5.00 Prom - 185443 185404   40                              -4.56

 6.03 PlyA - 185835 185830    6                               1.05
 6.02 Term - 194490 193939  552  0  0   20   51   539 0.998  37.71
 6.01 Init - 195118 194522  597  1  0   72  -95   420 0.555  17.38
 6.00 Prom - 195185 195146   40                              -8.46

 7.00 Prom + 195490 195529   40                              -8.76
 7.01 Init + 195863 195904   42  1  0   72   80    30 0.921   1.02
 7.02 Intr + 196956 197071  116  2  2  149   94    90 0.859  14.95
 7.03 Term + 203835 203937  103  0  1   76   54   108 0.771   3.95
 7.04 PlyA + 205133 205138    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586f:7939833_8152847|GENSCAN_predicted_peptide_1|72_aa
MTRCILELLAQARSGLQCWEYTDKKDVQAGTVAHTYNPSSLGGREQRQGWKLENLGISKD
YGTDCATDFAKT

>gi568815586f:7939833_8152847|GENSCAN_predicted_CDS_1|219_bp
atgactcgctgcatcctagagctcctggctcaagcgaggtcggggctgcaatgctgggaa
tatacagataaaaaagatgttcaggccggcacagtggctcacacgtataatcctagcagt
ttgggaggccgagaacaaagacaaggttggaagttagaaaacctgggtatcagcaaagac
tatggtacagactgtgctacagacttcgcaaaaacttaa

>gi568815586f:7939833_8152847|GENSCAN_predicted_peptide_2|894_aa
MIGKLVTKKFEEDMQMDLSEWSKTVKIFVYHKLLPPPPAFGDHDPDQSAAINVEARPSTS
KKIVTRSRLSRPAEMLLPLPTVFPQMRLLSRVLAPHLTRAYAKDVKFGADARALMLQGVD
LLADAVAVTMGPKGRTVIIEQSWGSPQIQIRAKLVQDIANNTNEEAGNGTTSATVLARSI
AKEGFKKISKGANPVEIRKGVMLAVDAVIAELRKQSKFVTTPEEIAQVATTSANGDKEIG
NIISNAMKKVGRKGVITVKDGKTLNDELEIIESGWASRWDPLTASKSLGFDFEWSVNVVA
KRDSVHRALPGKAPADSTKVFWRDCSPPTQGFQKASVHADFGGSKQETIDPVQEMTLFEG
NEEPRSTMASDLESSLTSIDWLPQLTLRATIEKLGSASQAGPPGSSRKCSPGSPTDPNAT
LSKDEAAVHQDGKPRYSYATLITYAINSSPAKKMTLSEIYRWICDNFPYYKNAGIGWKNS
IRHNLSLNKCFRKVPRPRDDPGKGSYWTIDTCPDISRKRRHPPDDDGTGSVDGGAVAAGA
SGRESAEGPPPLYNTNHDFKFSYSEINFQDLSWSFRNLYKSMLEKSSSSSQHGFSSLLGD
IPPSNNYYMYQQQQPPPPQQQQQQQQPPQPPPQQSQPQQQQAPAQGPSAVGGAPPLHTPS
TDGCTPPGGKQAGAEGYGPPPVMAMHPPPLQHGGYHPHQHHPHSHPAQQPPPPQPQAQGQ
APINNTGFAFPSDWCSNIDSLKESFKMVNRLNWSSIEQSQFSELMESLRQAEQKNWTLDQ
HHIANLCDSLNHFLTQTGHVPPQGGTHRPPAPARIADSCALTSGKQESAMSQVNSYGHPQ
APHLYPGPSPMYPIPTQDSAGYNRPAHHMVPRPSVPPPGANEEIPDDFDWDLIT

>gi568815586f:7939833_8152847|GENSCAN_predicted_CDS_2|2685_bp
atgattggaaaattggtgacaaagaaatttgaggaagacatgcagatggacctctctgag
tggtcaaaaactgtgaagatatttgtataccataaattgctaccaccacccccagccttc
ggcgaccacgaccctgatcagtcagcagccatcaacgttgaggcaagaccctccaccagc
aaaaagattgtgacacgctcaaggctcagccgccccgcagaaatgcttcttccgttaccc
acagtctttccccagatgagactgctgtccagggtactggcccctcatctcactcgggct
tatgccaaagatgtaaaatttggcgcagatgcccgagccttaatgcttcaaggtgtagac
cttttagccgatgctgtagctgttacgatggggccaaagggaagaacagtgattattgag
cagagctggggaagtccccaaatacaaattagagctaaacttgttcaagatattgctaat
aacacaaatgaagaggctggaaatggcaccacctctgctaccgtactggcacgctctatt
gccaaggagggcttcaagaagattagcaaaggtgctaatccagtggaaatcaggaaaggt
gtgatgttggctgttgatgctgtaattgctgaacttagaaagcagtctaaatttgtgacc
acccctgaagaaattgcacaggttgctacaacttctgcaaacggagacaaagaaattggc
aatatcatctccaatgcaatgaaaaaggttggaagaaagggtgtcatcacagtaaaggat
ggaaaaacactgaatgatgaattagaaattattgaaagtggctgggcgagccgctgggac
ccactaactgcctcgaaaagcctaggattcgactttgaatggtccgttaatgtggtcgca
aaacgtgactcggttcatcgggcgctccctggtaaggcccctgcagacagcacgaaggtg
ttttggagagattgttctcccccgacccaaggattccagaaagccagtgtacacgcagac
ttcggaggcagtaaacaggaaaccatcgatcccgtgcaggaaatgaccttgtttgaaggc
aacgaagaacccagaagtaccatggcttctgacctagagagtagcctcacctccatagac
tggctcccccagctgaccctccgagctaccattgagaagcttggaagtgcctcccaggct
gggcctcccgggagcagccgcaagtgttcaccagggtcacccacagatcctaatgccacc
ctgagcaaagacgaggcagcagtgcaccaggacggcaagccacgatacagctatgccact
ctcatcacctatgccatcaactcctctccagccaagaagatgaccctcagcgagatttac
cgctggatctgtgataacttcccctattacaagaatgctggcattggttggaagaattca
atacggcacaacctttctctcaacaagtgtttccggaaggtgcccagacctcgggatgac
cctgggaagggttcctattggacaattgacacctgccctgacatttcccgaaagagaaga
caccctccagatgatgatggcacaggatctgtggatggtggagcagtggcagcaggggct
tcaggccgagaaagtgctgagggtccccctcccctctataacaccaaccatgactttaaa
ttctcctactcagagatcaactttcaggatctaagctggtccttccgcaacctctataag
tccatgctggagaagtcctcttcctcctctcagcacggcttttcttctctcctgggggac
atcccaccctcgaacaactactacatgtatcagcagcagcagccaccgccacctcaacag
cagcagcagcagcagcagccgccacagccacctccccagcagtcccagccacagcagcag
caggcacctgcccagggcccctcagctgtagggggtgctcctccactgcacaccccaagc
acagatggttgtaccccaccagggggaaagcaagctggggcggaaggctatgggcctccc
cctgtaatggccatgcatccacccccgctgcagcatggaggctaccaccctcatcagcac
catccccactcccaccctgcccagcagccaccacctccacagccacaggcacaaggccag
gctcccatcaacaacactggctttgcctttccttctgactggtgctctaatattgactct
ttaaaggaaagcttcaagatggtgaatcggctcaattggtccagcattgagcagtcacaa
ttctcagaactgatggagagtctacgacaggcagagcagaagaactggaccctcgaccag
catcacattgccaatctgtgtgactccctcaaccacttccttactcagactggtcacgtg
ccccctcaagggggtacccaccgcccaccagcccctgcccgtattgctgactcctgtgcc
ctcaccagtggcaaacaggagtcagccatgagccaagtgaactcttatgggcacccacaa
gctccccacctctaccctggcccatcaccaatgtacccaatccccacccaggactcagca
ggatacaatcgcccagcacaccatatggtccctcggccatcagtgccacctcctggtgcc
aatgaggagatccctgatgacttcgactgggacttgatcacttag

>gi568815586f:7939833_8152847|GENSCAN_predicted_peptide_3|456_aa
MVILSLTFLLGLPGNGLVLWVAGLKMQRTVNTIWFLHLTLADLLCCLSLPFSLAHLALQG
QWPYGRFLCKLIPSIIVLNMFASVFLLTAISLDRCLVVFKPIWCQNHRNVGMACSICGCI
WVVAFVMCIPVFVYREIFTTDNHNRCGYKFGLSSSLDYPDFYGDPLENRSLENIVQPPGE
MNDRLDPSSFQTNDHPWTVPTVFQPQTFQRPSADSLPRGSARLTSQNLYSNVFKPADVVS
PKIPSGFPIEDHETSPLDNSDAFLSTHLKLFPSASSNSFYESELPQGFQDYYNLGQFTDD
DQVPTPLVAITITRLVVGFLLPSVIMIACYSFIVFRMQRGRFAKSQSKTFRVAVVVVAVF
LVCWTPYHIFGVLSLLTDPETPLGKTLMSWDHVCIALASANSCFNPFLYALLGKDFRKKA
RQSIQGILEAAFSEELTRSTHCPSNNVISERNSTTV

>gi568815586f:7939833_8152847|GENSCAN_predicted_CDS_3|1371_bp
atggtcattctcagccttacttttttactgggattgccaggcaatgggctggtgctgtgg
gtggctggcctgaagatgcagcggacagtgaacacaatttggttcctccacctcaccttg
gcggacctcctctgctgcctctccttgcccttctcgctggctcacttggctctccaggga
cagtggccctacggcaggttcctatgcaagctcatcccctccatcattgtcctcaacatg
tttgccagtgtcttcctgcttactgccattagcctggatcgctgtcttgtggtattcaag
ccaatctggtgtcagaatcatcgcaatgtagggatggcctgctctatctgtggatgtatc
tgggtggtggcttttgtgatgtgcattcctgtgttcgtgtaccgggaaatcttcactaca
gacaaccataatagatgtggctacaaatttggtctctccagctcattagattatccagac
ttttatggagatccactagaaaacaggtctcttgaaaacattgttcagccgcctggagaa
atgaatgataggttagatccttcctctttccaaacaaatgatcatccttggacagtcccc
actgtcttccaacctcaaacatttcaaagaccttctgcagattcactccctaggggttct
gctaggttaacaagtcaaaatctgtattctaatgtatttaaacctgctgatgtggtctca
cctaaaatccccagtgggtttcctattgaagatcacgaaaccagcccactggataactct
gatgcttttctctctactcatttaaagctgttccctagcgcttctagcaattccttctac
gagtctgagctaccacaaggtttccaggattattacaatttaggccaattcacagatgac
gatcaagtgccaacacccctcgtggcaataacgatcactaggctagtggtgggtttcctg
ctgccctctgttatcatgatagcctgttacagcttcattgtcttccgaatgcaaaggggc
cgcttcgccaagtctcagagcaaaacctttcgagtggccgtggtggtggtggctgtcttt
cttgtctgctggactccataccacatttttggagtcctgtcattgcttactgacccagaa
actcccttggggaaaactctgatgtcctgggatcatgtatgcattgctctagcatctgcc
aatagttgctttaatcccttcctttatgccctcttggggaaagattttaggaagaaagca
aggcagtccattcagggaattctggaggcagccttcagtgaggagctcacacgttccacc
cactgtccctcaaacaatgtcatttcagaaagaaatagtacaactgtgtga

>gi568815586f:7939833_8152847|GENSCAN_predicted_peptide_4|353_aa
MVGIYKTGVFWVGCDGKTKRKGNLRMLARELLKQGDGRNKEKANNVQNMKKNRNWVDPTY
SLFNRIKFSKKIIGIHAESVAKHFNRCRPEKSEIKSVSIWLPASPKRLISETNLNSRGSD
ATEVVALCISASRAPPPVLRFAPGSADSGPKMATELEYESVLCVKPDVSVYRIPPRASNR
GYRASDWKLDQPDWTGRLRITSKGKTAYIKLEDKVSGELFAQAPVEQYPGIAVETVTDSS
RYFVIRIQDGTGRSAFIGIGFTDRGDAFDFNVSLQDHFKWVKQESEISKESQEMDARPKL
DLGFKEGQTIKLCIGLCSKPGTTAIQLGPVLNGIGRTLRTDLRNKNDLEGTNL

>gi568815586f:7939833_8152847|GENSCAN_predicted_CDS_4|1062_bp
atggttggaatatataagactggagtcttttgggttggctgtgatggaaagacaaagagg
aaaggaaacttaaggatgctggcaagagaactgttgaaacaaggagatgggaggaataaa
gagaaggctaacaatgtgcagaacatgaagaagaacaggaattgggttgatcccacgtat
agtctatttaacaggatcaaattttccaaaaagataatcggaatacacgccgaaagtgtg
gcaaaacattttaacaggtgtcgtcctgaaaaatcggagataaagagtgtttcaatatgg
ctccccgcgtcaccgaaaaggttaatctcagaaactaacttgaactcgcgcggaagtgac
gcaacagaagttgtcgcgctttgcatctccgcctcccgtgctccgcctccggtcttacgt
ttcgcccccggcagcgccgacagcggacccaagatggcgaccgagttggagtacgagtct
gtgctgtgtgtgaagccagacgtcagcgtctaccggattccgccccgggcctccaaccgc
ggttacagggcctctgactggaaattagaccagcctgattggactggtcgcctccgaatc
acttcaaaagggaagactgcctatatcaaactcgaggataaagtttcaggggagctcttt
gctcaggcaccagtagaacaatatcctggtattgctgtggagacggtgacagattctagc
cgctactttgtaatccggatccaggatggtactgggcgcagtgctttcattggcattggc
ttcacagatcggggagatgccttcgactttaatgtctccttgcaggatcacttcaagtgg
gtaaagcaggaatctgagatttccaaggaatctcaagaaatggatgctcgtcctaagttg
gatctgggcttcaaggaaggacaaaccatcaagttgtgtatcgggctctgttccaaacca
ggcaccacagccatccaactgggtccagttctgaatggcattggcaggacattaaggaca
gacttgaggaataaaaatgaccttgagggcaccaatctgtga

>gi568815586f:7939833_8152847|GENSCAN_predicted_peptide_5|150_aa
MEYYAAIKNDEFMSFVGTWMKLVTIILSKLSQGQKTKHRMFSLTEIQKTLRDYYEHLYAH
KLENLEKLEMDKFLETCNLPRLTQEEIESLNRSITSSETESVIKSLPTRKGPGPGGFTAK
FYWMYKEEVPAELFLLKLFQKFEEEGLIAN

>gi568815586f:7939833_8152847|GENSCAN_predicted_CDS_5|453_bp
atggaatactatgcagccataaaaaatgatgagttcatgtcctttgtagggacatggatg
aaactggtaaccatcattctcagcaaactatcgcaaggacaaaaaaccaaacaccgcatg
ttctcactcacagaaatacaaaaaaccctcagagactattatgaacacctctatgcacac
aaactagaaaacctagaaaaactagaaatggacaaattcttggaaacatgcaacctccca
agattgacccaggaagaaattgaatccctgaacagatcaataacaagttctgaaactgaa
tcagtaataaaaagcctaccaaccagaaaaggcccaggaccaggtggattcacagccaaa
ttctactggatgtataaagaagaggttcctgctgaactattcctactgaaactgttccaa
aaatttgaggaggaaggactcatcgctaactga

>gi568815586f:7939833_8152847|GENSCAN_predicted_peptide_6|382_aa
MLETNEKLESFSKELEDIKKNQDFTMLGAPSFPMAGHLASDFAFSPPPGGGGDGPGGPEP
GWVDPRTWLSFQGPPGGPGIGPGFGPGSEEWGIPPCPPPYEFCGGMAYCGPQTGVGLVPQ
DGLETSQPEGEAGVGVESNSDGASPEPCTVPSGAVKLEKEKLEQNPEESQDIKALQKELE
QFAKLLKQKRITLGYTQADVFSQTTICRFEALQLSFKNMCELRPLLQKWVEEADNNENLQ
EICKAETLVQARKRKRTSIENQVRGNLENLFLRCPKPTLQQISHIAQQLGLEKDVVRVWF
CNRRQKGKRSSSGYAQREDFEAVGSPFSGGPVSFPLAPGPHFGTPGYGSPHFTALYSSVP
FPEGEAFPPVSVTTLGSPMHSN

>gi568815586f:7939833_8152847|GENSCAN_predicted_CDS_6|1149_bp
atgcttgaaacaaatgaaaaactagaaagtttcagcaaagaactagaagatataaagaaa
aaccaagatttcaccatgcttggggcgccttccttccccatggcgggacacctggcttcg
gatttcgccttctcaccccctccaggcggtggaggtgatgggccaggggggccggagccg
ggctgggttgatcctcggacctggctaagcttccaaggccctcctggagggccaggaatc
gggccggggtttgggccaggctctgaggagtgggggattcccccatgtcccccgccgtat
gagttctgcggggggatggcgtactgtgggcctcagactggagtggggctagtgccccaa
gacggcttggagacctctcagcctgagggcgaagcaggagtcggggtggagagcaactcc
gatggggcctccccggagccctgcaccgtcccctctggtgccgtgaagctggagaaggag
aagctggagcaaaacccggaggagtcccaggacatcaaagctctgcagaaagaactcgag
caatttgccaagctcctgaagcagaagaggatcaccctgggatatacacaggccgatgtg
ttcagccaaacgaccatctgccgctttgaggctctgcagcttagcttcaagaacatgtgt
gagctgcggcccttgctgcagaagtgggtggaggaagctgacaacaatgaaaatcttcag
gagatatgcaaagcagaaaccctcgtgcaggcccgaaagagaaagcgaaccagtatcgag
aaccaagtgagaggcaacctggagaatttgttcctgcggtgcccgaaacccacactgcag
cagatcagccacatcgcccagcagcttgggctggagaaggatgtggtccgagtgtggttc
tgtaaccggcgccagaagggcaagcgatcaagcagtggctatgcacaacgagaggatttt
gaggctgttgggtctcctttctcagggggaccagtgtcctttcctctggccccagggccc
cattttggtaccccaggctatgggagccctcacttcactgcactgtactcctcggtccct
ttccctgagggggaagcctttccccctgtctccgtcaccactctgggctctcccatgcat
tcaaactga

>gi568815586f:7939833_8152847|GENSCAN_predicted_peptide_7|86_aa
MEAHLLVINTQEEQDFIFQNLQEESAYFVGLSDPEGQRHWQWVDQTPYNESSTGVDTVPH
SSRLMGLLYCSILDLEPLLECVLLYM

>gi568815586f:7939833_8152847|GENSCAN_predicted_CDS_7|261_bp
atggaggctcacctgctggtgataaacactcaagaagagcaggatttcatcttccagaat
ctgcaagaagaatctgcttattttgtggggctctcagatccagaaggtcagcgacattgg
caatgggttgatcagacaccatacaatgaaagttccacaggagttgacactgtgccccat
tcatcacggctgatggggctgctgtactgcagcatcttggacctggaaccactgctggag
tgtgtcctgctctacatgtga