GENSCAN 1.0	Date run:  6-Nov-116	Time: 14:50:32

Sequence gi568815586f:50948357_51159428 : 211072 bp : 43.46% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   4344   4359   16  2  1   81   99     0 0.129   0.75
 1.02 Intr +   5635   5736  102  2  0   60   97    57 0.377   3.95
 1.03 Intr +  12612  12746  135  1  0   84   59    82 0.833   5.44
 1.04 Term +  19702  19814  113  2  2   46   43   143 0.496   4.32
 1.05 PlyA +  20641  20646    6                               1.05

 2.00 Prom +  28006  28045   40                              -4.76
 2.01 Sngl +  28518  29648 1131  2  0   60   44   336 0.992  22.98
 2.02 PlyA +  30286  30291    6                               1.05

 3.18 PlyA -  30905  30900    6                               1.05
 3.17 Term -  31337  31272   66  2  0  114   39    29 0.032  -1.46
 3.16 Intr -  40079  40026   54  2  0   96  115    19 0.172   4.58
 3.15 Intr -  42592  42439  154  0  1  110  111   109 0.999  15.47
 3.14 Intr -  43316  43243   74  2  2  107   74    63 0.999   5.00
 3.13 Intr -  44013  43834  180  0  0  111   94   150 0.777  17.96
 3.12 Intr -  44573  44454  120  2  0   89   94    -5 0.646   0.89
 3.11 Intr -  46274  46188   87  2  0   58   86   112 0.991   8.17
 3.10 Intr -  47431  47273  159  1  0   88   89   163 0.828  16.58
 3.09 Intr -  48552  48461   92  1  2   45  105    68 0.797   3.91
 3.08 Intr -  50885  50811   75  0  0  129   37    77 0.935   6.19
 3.07 Intr -  51059  50989   71  1  2   84   91    13 0.999   0.03
 3.06 Intr -  52063  51957  107  1  2   69  100   124 0.998  10.71
 3.05 Intr -  56551  56432  120  1  0   48  105    31 0.718   1.49
 3.04 Intr -  57080  56955  126  2  0   99   61    65 0.977   5.78
 3.03 Intr -  60188  60120   69  2  0   86   88   126 0.357  11.78
 3.02 Intr -  69130  69106   25  0  1  112   62    24 0.091   0.23
 3.01 Init -  77670  77570  101  0  2   79   13   190 0.288   8.34
 3.00 Prom -  89252  89213   40                              -2.46

 4.00 Prom +  95349  95388   40                              -3.66
 4.01 Init + 100001 100122  122  1  2   96   85    88 0.969   6.96
 4.02 Intr + 100678 100829  152  1  2   93   93    95 0.944  10.31
 4.03 Intr + 105456 105504   49  1  1   50   82    46 0.665  -2.06
 4.04 Intr + 107479 107665  187  1  1  121   61    10 0.344   1.29
 4.05 Intr + 107994 108146  153  2  0   69  103    56 0.621   5.47
 4.06 Term + 111754 111852   99  0  0   80   48    62 0.635  -0.47
 4.07 PlyA + 113943 113948    6                               1.05

 5.19 PlyA - 114821 114816    6                              -3.24
 5.18 Term - 116313 115390  924  0  0  106   48   768 0.996  66.78
 5.17 Intr - 119613 119317  297  0  0   96   82   420 0.995  39.27
 5.16 Intr - 120318 120193  126  0  0   65   88    37 0.742   2.28
 5.15 Intr - 125726 125467  260  0  2   79   46   300 0.956  22.08
 5.14 Intr - 128223 128055  169  0  1   20   94   233 0.138  16.62
 5.13 Intr - 129628 129520  109  0  1   70   34    49 0.032  -2.01
 5.12 Intr - 135429 135339   91  1  1   64   33   128 0.015   3.95
 5.11 Intr - 147684 147633   52  0  1   97   85    18 0.498   0.88
 5.10 Intr - 150562 150420  143  2  2  117   61    78 0.974   8.07
 5.09 Intr - 151423 151299  125  0  2  115   86    57 0.940   8.43
 5.08 Intr - 158257 158169   89  1  2   84  110    14 0.977   1.97
 5.07 Intr - 158990 158880  111  2  0   59   83    53 0.844   2.48
 5.06 Intr - 160917 160765  153  0  0  105   61    63 0.974   5.57
 5.05 Intr - 162627 162521  107  1  2   95  110    23 0.949   5.13
 5.04 Intr - 168064 167959  106  1  1   84   95    78 0.997   7.89
 5.03 Intr - 169391 169315   77  0  2   98   93    99 0.904  10.63
 5.02 Intr - 170579 170525   55  2  1   34  113    -6 0.195  -4.95
 5.01 Init - 173311 173309    3  1  0  113   81     0 0.323   1.80
 5.00 Prom - 175051 175012   40                              -5.76

 6.03 PlyA - 175198 175193    6                               1.05
 6.02 Term - 176910 176272  639  0  0   -6   43   758 0.362  56.11
 6.01 Init - 177051 177025   27  0  0   88  127    27 0.707   6.25
 6.00 Prom - 187412 187373   40                              -2.46


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  40079  39969  111  2  0   96   41    84 0.819   3.06
S.002 Init - 128205 128055  151  0  1   37   94   227 0.860  18.40


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586f:50948357_51159428|GENSCAN_predicted_peptide_1|121_aa
MALPPEKKMSSDNQWSADEDEGQLSRLIRKSRDSPFVPIGIAGFVTVVSCGLYKLKYRRD
QKMSIHLIHMRVAAQGFVVGAVTLALATERGIVSNNKKKKEEEEEEEENEEEEEKGFITE
I

>gi568815586f:50948357_51159428|GENSCAN_predicted_CDS_1|366_bp
atggccttaccgccagagaaaaaaatgtcttcagataaccagtggtcagcagatgaggat
gaaggccaattatcccgactaatcaggaaatctagagactccccctttgtccctataggt
atagcaggctttgtgactgtggtgtcctgtggtctttacaagctaaagtacagaagagat
cagaaaatgtcaattcatcttattcacatgagagttgctgcccaaggatttgttgttgga
gctgtgactctagccttggccacagagcgaggcattgtctcaaataataagaagaagaag
gaggaggaggaggaggaggaggagaatgaggaggaggaggagaagggatttattacagag
atatga

>gi568815586f:50948357_51159428|GENSCAN_predicted_peptide_2|376_aa
MSEIPFTIASKRIKYLGIQLTREVKDLSKENYKPLLNEIKEDTNKWKNIPCSWVGRINIV
KTAILPKVIYRFNAIPIKLPMTFFTELGKTTLKFIWNQKRACIAKSILSQKNKAGSITLP
DFKLYYQATVTKTAWYWCQNRDIDQWNRTEPSEIIPHIYNHLTFDKPDKNEKWGKDSLFN
KWCWENWLAICRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGITIQDIGMGKD
FMSKPPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTEWEKISAIYSSDKGLISRI
YKELKQFHKKKNNPINKWVKDMNRHFSKEDIYAANRHMKKCSSSLAIREMQIKTTMRYHL
TPVRMAIIKKSGNNRY

>gi568815586f:50948357_51159428|GENSCAN_predicted_CDS_2|1131_bp
atgagtgaaatcccattcacaattgcttcaaagagaataaaatacctaggaatccaactt
acaagggaggtgaaggacctctccaaggagaactacaaaccactgctcaatgaaataaaa
gaggatacaaacaaatggaagaacattccatgctcatgggtaggaagaatcaatatcgtg
aaaacggccatactgcccaaggtaatttatagattcaatgccatccccatcaagctacca
atgactttcttcacagaattgggaaaaactactttaaagttcatatggaaccaaaaaaga
gcctgcattgccaagtcaatcctaagccaaaagaacaaagctggaagcatcacgctacct
gacttcaaactatactaccaggctacagtaaccaaaacagcatggtactggtgccaaaac
agagatatagaccaatggaacagaacagagccctcagaaataataccacacatctacaac
catctgacctttgacaaacctgacaaaaacgagaaatggggaaaggattccctatttaac
aaatggtgctgggaaaactggttagccatatgtagaaagctgaaactggatcccttcctt
acaccttatacaaaaattaattcaagatggattaaagacttaaacgttagacctaaaacc
ataaaaaccctagaagaaaacctaggcattaccattcaggacataggcatgggcaaggac
ttcatgtctaaaccaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatcta
attaaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaacct
acagaatgggagaaaatttctgcaatctactcatctgacaaagggctaatatccagaatc
tacaaagaactcaaacaatttcacaagaaaaaaaacaaccccatcaacaagtgggtgaag
gatatgaacagacacttctcaaaagaagacatttatgcagccaacagacacatgaaaaaa
tgctcatcatcactggccatcagagaaatgcaaatcaaaaccacaatgagataccatctc
acaccagttagaatggcgatcattaaaaagtcaggaaacaacaggtactag

>gi568815586f:50948357_51159428|GENSCAN_predicted_peptide_3|559_aa
MAQLPAAPDGAPGLCRGALTCFDASKEADGHRARDGLYYQFLSPGDSEEYFATYFNEKIS
IPEEEYSCFSFRKLWAFTGPGFLMSIAYLDPGNIESDLQSGAVAGFKLLWILLLATLVGL
LLQRLAARLGVVTGLHLAEVCHRQYPKVPRVILWLMVELAIIGSDMQEVIGSAIAINLLS
VGRIPLWGGVLITIADTFVFLFLDKYGLRKLEAFFGFLITIMALTFGYEASGCRTPQIEQ
AVGIVGAVIMPHNMYLHSALVKSRQVNRNNKQEVREANKYFFIESCIALFVSFIINVFVV
SVFAEAFFGKTNEQVVEVCTNTSSPHAGLFPKDNSTLAVDIYKGGVVLGCYFGPAALYIW
AVGILAAGQSSTMTGTYSGQFVMETVICSYVFFQGFLNLKWSRFARVVLTRSIAIIPTLL
VAVFQDVEHLTGMNDFLNVLQSLQLPFALIPILTFTSLRPVMSDFANGLGWRIAGGILVL
IICSINMYFVVVYVRDLGHVALYVVAAVVSVAYLGFVFYLGWQCLIALGMSFLDCGHTGL
LKLQIMRAANPATQAIESF

>gi568815586f:50948357_51159428|GENSCAN_predicted_CDS_3|1680_bp
atggcccagctcccagctgcaccggatggcgcgcccggcctgtgtcggggtgcgctgacc
tgcttcgacgcctcgaaagaggccgacgggcacagggcaagggatggcctttattaccag
tttttgtcccctggggactcagaggagtacttcgccacttactttaatgagaagatctcc
attcctgaggaggagtactcttgttttagctttcgtaaactctgggctttcaccggacca
ggttttcttatgagcattgcctacctggatccaggaaatattgaatccgatttgcagtct
ggagcagtggctggatttaagttgctctggatccttctgttggccacccttgtggggctg
ctgctccagcggcttgcagctagactgggagtggttactgggctgcatcttgctgaagta
tgtcaccgtcagtatcccaaggtcccacgagtcatcctgtggctgatggtggagttggct
atcatcggctcagacatgcaagaagtcattggctcagccattgctatcaatcttctgtct
gtaggaagaattcctctgtggggtggcgttctcatcaccattgcagatacttttgtattt
ctcttcttggacaaatatggcttgcggaagctagaagcattttttggctttctcatcact
attatggccctcacatttggatatgaggcaagtggctgtcgcactccacagattgaacag
gctgtgggcatcgtgggagctgtcatcatgccacacaacatgtacctgcattctgcctta
gtcaagtctagacaggtaaaccggaacaataagcaggaagttcgagaagccaataagtac
tttttcattgaatcctgcattgcactctttgtttccttcatcatcaatgtctttgttgtc
tcagtctttgctgaagcattttttgggaaaaccaacgagcaggtggttgaagtctgtaca
aataccagcagtcctcatgctggcctctttcctaaagataactcgacactggctgtggac
atctacaaagggggtgttgtgctgggatgttactttgggcctgctgcactctacatttgg
gcagtggggatcctggctgcaggacagagctccaccatgacaggaacctattctggccag
tttgtcatggagacagtcatctgctcctatgttttcttccagggattcctgaacctaaag
tggtcacgctttgcccgagtggttctgactcgctctattgccatcatccccactctgctt
gttgctgtcttccaagatgtagagcatctaacagggatgaatgactttctgaatgttcta
cagagcttacagcttccctttgctctcatacccatcctcacatttacgagcttgcggcca
gtaatgagtgactttgccaatggactaggctggcggattgcaggaggaatcttggtcctt
atcatctgttccatcaatatgtactttgtagtggtttatgtccgggacctagggcatgtg
gcattatatgtggtggctgctgtggtcagcgtggcttatctgggctttgtgttctacttg
ggttggcaatgtttgattgcactgggcatgtccttcctggactgtgggcatacgggcctc
ttgaaacttcagataatgagagcagccaaccctgcaactcaggctatagagtccttctga

>gi568815586f:50948357_51159428|GENSCAN_predicted_peptide_4|253_aa
MALSRVCWARSAVWGSAVTPGHFVTRRLQLGRSGLAWGAPRSSKLHLSPKADVKNLMSYV
VTKTKAINGKYHRFLGRHFPRFYVLYTIFMKGIISIPPFANYLVFLLMYLFPRQLLIRHF
WTPKQQTDFLDIYHAFRKQSHPEIISYLEKVIPLISDAGLRWRLTDLCTKKALSRAMLLT
SYLPPPLLRHRLKTHTTVIHQLDKALAKLGIGQLTAQEVKSPSLSIVFSGLYYSPLWIFN
SAASTVMQQSNCN

>gi568815586f:50948357_51159428|GENSCAN_predicted_CDS_4|762_bp
atggcgctctccagggtgtgctgggctcggtcggctgtgtggggctcggcagtcacccct
ggacattttgtcacccggaggctgcaacttggtcgctctggcctggcttggggggcccct
cggtcttcaaagcttcacctttctccaaaggcagatgtgaagaacttgatgtcttatgtg
gtaaccaagacaaaagcgattaatgggaaataccatcgtttcttgggtcgtcatttcccc
cgcttctatgtcctgtacacaatcttcatgaaaggtattatttccattccaccttttgcc
aactacctggtcttcttgctaatgtacctgtttcccaggcaactactgatcaggcatttc
tggaccccaaaacaacaaactgatttcttagatatctatcatgctttccggaagcagtcc
cacccagaaattattagttatttagaaaaggtcatccctctcatttctgatgcaggactc
cggtggcgtctgacagatctgtgcaccaagaaagccttgagccgggccatgcttctcaca
tcttacctgcctcctcccttgttgagacatcgtttgaagactcatacaactgtgattcac
caactggacaaggctttggcaaagctggggattggccagctgactgctcaggaagtaaaa
tcgccttcactctccattgtcttttctgggctgtattacagccctctgtggatcttcaac
tctgctgcctccactgtgatgcagcagtccaactgtaactga

>gi568815586f:50948357_51159428|GENSCAN_predicted_peptide_5|998_aa
MGDITAGNLNGILGMKLHQGQSYEIRMLDNRKLGELPEINGKLVKSIFRVVFHDRRLQYT
EHQQLEGWRWNRPGDRILDIDIPMSVGIIDPRANPTQLNTVEFLWDPAKRTSVFIQVHCI
STEFTMRKHGGEKGVPFRVQIDTFKENENGEYTEHLHSASCQIKVFKPKGADRKQKTDRE
KMEKRTPHEKEKYQPSYETTILTECSPWPEITYVNNSPSPGFNSSHSSFSLGEGMVRPRL
TIYVCQESLQLREQQQQQQQQQQKHEDGDSNGTFFVYHAIYLEELTAVELTEKIAQLFSI
SPCQISQIYKQGPTGIHVLISDEMIQNFQEEACFILDTMKGCSRAAASGAGLRAGFGFAA
VTAYNSRHAAGISAEQIRVLLELKSKDGGKRFVPREMDYLRLLGCMKETPLKPMDAFTGS
GLKRKFDDVDVGSSVSNSDDEISSSDSADSCDSLNPPTTASFTPTSILKRQKQLRRKNVR
FDQVTVYYFARRQGFTSVPSQGGSSLGMAQRHNSVRSYTLCEFAQEQEVNHREILREHLK
EEKLHAKKMKKASECKLGDTCLEIDGMFVEIDFRVGGKMRRVFEKLGPRKVMLTKNGTVE
SVEADGLTLDDVSDEDIDVENVEVDDYFFLQPLPTKRRRALLRASGVHRIDAEEKQELRA
IRLSREECGCDCRLYCDPEACACSQAGIKCQVDRMSFPCGCSRDGCGNMAGRIEFNPIRV
RTHYLHTIMKLELESKRQVSRPAAPDEEPSPTASCSLTGAQGSETQDFQEFIAENETAVM
HLQSAEELERLKAEEDSSGSSASLDSSIESLGVCILEEPLAVPEELCPGLTAPILIQAQL
PPGSSVLCFTENSDHPTASTVNSPSYLNSGPLVYYQVEQRPVLGVKGEPGTEEGSASFPK
EKDLNVFSLPVTSLVACSSTDPAALCKSEVGKTPTLEALLPEDCNPEEPENEDFHPSWSP
SSLPFRTDNEEGCGMVKTSQQNEDRPPEDSSLELPLAV

>gi568815586f:50948357_51159428|GENSCAN_predicted_CDS_5|2997_bp
atgggggatatcacagcaggtaatctaaatggaattcttgggatgaaactccaccaagga
cagtcttatgaaattcgaatgctagacaataggaaacttggagaacttccagaaattaat
ggcaaattggtgaagagtatattccgtgtggtgttccatgacagaaggcttcagtacact
gagcatcagcagctagagggctggaggtggaaccgacctggagacagaattcttgacata
gatatcccgatgtctgtgggtataatcgatcctagggctaatccaactcaactaaataca
gtggagttcctgtgggaccctgcaaagaggacatctgtgtttattcaggtgcactgtatt
agcacagagttcactatgaggaaacatggtggagaaaagggggtgccattccgagtacaa
atagataccttcaaggagaatgaaaacggggaatatactgagcacttacactcggccagc
tgccagatcaaagttttcaagcccaaaggtgcagacagaaagcaaaaaacggatagggaa
aaaatggagaaacgaacacctcatgaaaaggagaaatatcagccttcctatgagacaacc
atactcacagagtgttctccatggcccgagatcacgtatgtcaataactccccatcacct
ggcttcaacagttcccatagcagtttttctcttggggaagggatggtgcgtccaaggtta
accatttatgtttgtcaggaatcactgcagttgagggagcagcaacaacagcagcagcaa
cagcagcagaagcatgaggatggagactcaaatggtactttcttcgtttaccatgctatc
tatctagaagaactaacagctgttgaattgacagaaaaaattgctcagcttttcagcatt
tccccttgccagatcagccagatttacaagcaggggccaacaggaattcatgtgctcatc
agtgatgagatgatacagaactttcaggaagaagcatgttttattctggacacaatgaaa
ggttgcagcagagctgccgcctcgggagccggtttgcgcgccggcttcggctttgcagca
gttaccgcctacaactcccggcatgctgctggcatttctgctgagcagattcgtgtcctt
ctggaacttaaatccaaagatggaggaaaaagatttgtacctagggaaatggactatctc
agactccttggttgtatgaaagaaacccctttgaaaccaatggatgcattcacgggctcg
ggtctcaagaggaagtttgatgatgtggatgtgggctcatcagtttccaactcagatgat
gagatctccagcagtgatagtgctgacagctgcgacagcctcaatcctcctaccactgcc
agcttcacacccacatccatcctgaagcggcagaagcagctgcggaggaagaatgtacgc
tttgaccaggtgactgtatactactttgcccggcgccaaggttttaccagtgtgcccagc
cagggtggtagctctctgggcatggcccagcgccataactctgtacggagctatacactc
tgtgagtttgcccaggaacaggaggtgaaccatcgagagattctgcgtgagcacctgaag
gaagagaaactccatgccaagaaaatgaagaaggcaagtgagtgtaaattaggggataca
tgtctggaaatagacggtatgtttgtggaaatagattttcgtgtaggagggaagatgaga
cgggtttttgagaagcttggacccagaaaggtgatgctgaccaagaatgggacagtggag
tcggtggaggctgatggcctgacgctggatgatgtgtcagatgaagatattgatgtggaa
aatgtggaggtggatgattacttcttcctgcagcctctgcccaccaaacggcgacgggcc
ctgctgagggcttctggggtccaccgtattgatgctgaagagaagcaagaacttcgagcc
atccgcctgtcacgggaagaatgtggttgtgactgccgactgtattgtgacccagaagcg
tgtgcctgcagccaggctgggattaaatgccaggtggatcgcatgtcctttccatgtggc
tgctcccgggatggctgtgggaacatggcaggacgcattgaatttaatccaatccgggtc
cggactcattacctccacaccattatgaagctggagctggagagcaagcggcaggtgagc
cgcccagcagccccagatgaggagccctccccgactgccagttgcagcctgacaggagca
cagggctctgagacccaggacttccaggagttcattgctgagaatgagacagcagtgatg
cacctgcagagtgcagaggaactggagcggctcaaggcagaagaagattccagcggctct
agtgccagcctggactcgagcatcgagagcctgggtgtgtgcatcctagaggagcctctg
gctgtccccgaagagctgtgcccaggccttacagcccccattctcatccaggctcagctg
cccccaggctcctctgtcctgtgttttaccgagaactcagaccacccaactgcctcaacg
gtgaacagcccatcctacttgaacagtgggcccctggtctattatcaagtggagcagagg
ccagtcttgggagtgaaaggagagcctggtacggaagaaggctcagcctctttcccaaag
gagaaggatctgaatgtcttctctctccctgttacctcactcgtggcttgtagctccaca
gacccagctgccctctgtaaatcagaggtggggaaaacacccaccctagaagctctattg
cccgaagattgtaaccctgaggagcctgaaaatgaagacttccacccttcctggtccccc
tcaagcctccccttccgcacggacaatgaagagggctgtgggatggtgaagacctcccag
cagaatgaggatcggccccctgaagattcttccttagaactccctctggcagtgtga

>gi568815586f:50948357_51159428|GENSCAN_predicted_peptide_6|221_aa
MAAKVFESTDIVVGDSLSHPMGTETNYLCLSPPRNVPIITGSKDLQNVNITLRIIFQPVA
SQLPRIFTSIGEDYDEPVLTYITTEILKSVVARFDAGEVITQRELVSRQVSNDLTEQAAT
FGLILDDVSLTYLTFGKEFTEAVEAKQVAQQEAERARFVKEKAEQQKKAEQQKKVEQQKK
AAVISAEGDSKATELIANSLATAGDGLMELCKLEAAEALGT

>gi568815586f:50948357_51159428|GENSCAN_predicted_CDS_6|666_bp
atggcagccaaagtgtttgagtccacggacattgtggtaggggactcactttctcatccc
atgggtacagaaaccaattatctttgcctttctccaccacgtaatgtaccaatcatcact
ggtagcaaagatttacagaatgtcaatatcacactgcgcatcatcttccagcctgttgct
agccagcttcctcgcatcttcaccagcatcggagaggactatgatgagcctgtgctgacg
tacatcacgaccgagatcctcaagtcagtggtggctcgctttgatgctggagaagttatc
actcagagagagctggtctccaggcaggtgagcaacgaccttacggagcaagcagccaca
tttgggctcatcctggacgacgtgtccttgacatatctgacctttggaaaggagttcaca
gaagcagtggaagccaaacaggtggctcagcaggaagcagagagggccagatttgtgaag
gaaaaggctgagcagcagaaaaaggctgagcagcagaaaaaggttgagcagcagaaaaag
gcagccgtgatctctgctgagggcgactccaaggcaaccgagctgattgccaactcactg
gccaccgcgggggacggcctgatggagctgtgcaagttggaagccgcggaggctctcgga
acatga