GENSCAN 1.0	Date run:  8-Nov-116	Time: 09:50:11

Sequence gi568815586f:120338127_120540534 : 202408 bp : 47.85% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.15 PlyA -    422    417    6                               1.05
 1.14 Term -   4979   4944   36  2  0   85   52    64 0.433  -0.16
 1.13 Intr -   8163   8009  155  1  2  106   84   252 0.950  26.39
 1.12 Intr -   9388   9320   69  2  0   94   99    92 0.994  10.05
 1.11 Intr -   9562   9536   27  2  0   99   63    34 0.510   0.09
 1.10 Intr -  15253  15173   81  2  0   97  131    91 0.991  13.91
 1.09 Intr -  18893  18776  118  2  1   35   59   121 0.687   3.94
 1.08 Intr -  19772  19690   83  0  2   92  101   107 0.981  11.76
 1.07 Intr -  20927  20879   49  2  1   66  105   123 0.916  10.05
 1.06 Intr -  25009  24917   93  1  0  112   98   150 0.994  18.56
 1.05 Intr -  26629  26588   42  1  0   97  100    14 0.737   1.94
 1.04 Intr -  29966  29882   85  1  1   53   79    84 0.608   3.82
 1.03 Intr -  30147  30066   82  1  1   35   99   134 0.986   7.90
 1.02 Intr -  30361  30291   71  0  2   66   40    64 0.626  -1.77
 1.01 Init -  30855  30707  149  0  2  121   84    97 0.680  10.17
 1.00 Prom -  45133  45094   40                              -4.76

 2.04 PlyA -  46244  46239    6                               1.05
 2.03 Term -  50898  50820   79  2  1   77   38   106 0.823   1.74
 2.02 Intr -  55232  55171   62  2  2   77  107    32 0.718   1.53
 2.01 Init -  57672  57619   54  0  0   92   90    59 0.814   5.78
 2.00 Prom -  74039  74000   40                              -1.96

 3.00 Prom +  74172  74211   40                              -3.86
 3.01 Init + 100001 100103  103  1  1   85   84    74 0.818   5.65
 3.02 Intr + 100253 100395  143  0  2   85  107   240 0.941  25.67
 3.03 Term + 102654 102737   84  2  0   92   44    51 0.665  -1.25
 3.04 PlyA + 105274 105279    6                               1.05

 4.03 PlyA - 105865 105860    6                               1.05
 4.02 Term - 106829 106746   84  2  0   97   43   101 0.996   4.15
 4.01 Init - 108246 108100  147  0  0   97   99   298 0.636  31.89
 4.00 Prom - 108294 108255   40                             -16.83

 5.00 Prom + 108312 108351   40                             -16.89
 5.01 Init + 108355 108435   81  0  0   53  103   115 0.999   8.49
 5.02 Intr + 108531 108703  173  2  2  121   97   359 0.997  38.84
 5.03 Intr + 118950 119053  104  0  2   70   98   142 0.974  13.22
 5.04 Term + 120501 120508    8  1  2  121   42     0 0.606  -3.27
 5.05 PlyA + 121575 121580    6                              -0.45

 6.05 PlyA - 123271 123266    6                               1.05
 6.04 Term - 124036 123893  144  1  0  117   53    47 0.825   2.01
 6.03 Intr - 125981 125824  158  0  2   51   90   191 0.677  15.33
 6.02 Intr - 127661 127570   92  1  2   98   47   103 0.594   6.84
 6.01 Init - 131483 131296  188  2  2   34   93   527 0.997  46.33
 6.00 Prom - 133668 133629   40                              -4.16

 7.00 Prom + 146915 146954   40                              -4.46
 7.01 Init + 158296 158427  132  0  0   76  100   232 0.897  23.34
 7.02 Term + 159947 160084  138  1  0  116   42   130 0.993   9.16
 7.03 PlyA + 160347 160352    6                               1.05

 8.08 PlyA - 161275 161270    6                               1.05
 8.07 Term - 165759 165658  102  0  0  124   31   107 0.999   6.88
 8.06 Intr - 165955 165844  112  0  1   89   80    94 0.951   9.08
 8.05 Intr - 166857 166769   89  0  2   60   52    24 0.638  -5.23
 8.04 Intr - 171997 171891  107  2  2   86   80   177 0.842  16.63
 8.03 Intr - 178662 178441  222  1  0   96  105   172 0.998  17.80
 8.02 Intr - 184237 184088  150  2  0   48   95   110 0.989   7.83
 8.01 Init - 184865 184499  367  2  1   77   50   262 0.583  18.49
 8.00 Prom - 185576 185537   40                              -9.46

 9.00 Prom + 187322 187361   40                              -3.06
 9.01 Init + 188182 188540  359  0  2   60   33   289 0.176  17.18
 9.02 Intr + 196209 196263   55  0  1   60   57    69 0.441  -0.02
 9.03 Term + 196532 196831  300  1  0   92   40   340 0.845  24.82
 9.04 PlyA + 197470 197475    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586f:120338127_120540534|GENSCAN_predicted_peptide_1|379_aa
MADPGPAGPPRSPGPRPLRPGARRSRGPFVSLLLPQQDVHRGTQLADYAGPARPSASRGP
GGRQEAQRERGEGEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ
SRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAML
MFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKEVMSPTGSARGRS
RVMPYGMDAFMLGIGMLGYPGFQATTYASRSYTGLAPGYTYQFPGQDTDGVAQAIPLTAY
GPMAAAAAAAAVVRGTGSTPSRTGGFLGTTSPGPMAELYGAANQDSGVSSYISAASPAPS
TGFGHSLGRPSLQLTEDHE

>gi568815586f:120338127_120540534|GENSCAN_predicted_CDS_1|1140_bp
atggccgatccgggtccggccgggcctccccggagcccgggcccgcgccccctgcgccct
ggcgcccggcgctcacgcgggccctttgtgtctctcctcctcccgcagcaagatgttcat
cgggggactcagttggcagactacgcaggcccagctcggccctcggcttcccggggcccc
ggtgggcgccaggaggctcagcgggaacggggcgagggcgaagggctgcgcgaatacttc
ggccagttcggggaggtgaaggagtgtctggtgatgcgggaccccctgaccaagagatcc
aggggtttcggcttcgtcactttcatggaccaggcgggggtggataaagtgctggcgcaa
tcgcggcacgagctcgactccaaaacaattgaccctaaggtggccttccctcggcgagca
cagcccaagatggtgactcgaacgaagaagatctttgtgggggggctgtcggtgaacacc
acggtggaggacgtgaagcaatattttgagcagtttgggaaggtggacgacgccatgctg
atgtttgacaaaaccaccaaccggcaccgagggttcgggtttgtcacgtttgagagtgag
gacatcgtggagaaagtgtgtgaaattcattttcatgaaatcaacaacaaaatggtggaa
tgtaagaaagctcagccaaaggaggtgatgtcgccaacgggctcagcccgggggaggtct
cgagtcatgccctacggaatggacgccttcatgctgggcatcggcatgctgggttaccca
ggtttccaagccacaacctacgccagccggagttatacaggcctcgcccctggctacacc
taccagttccccggtcaggacacagatggtgtggcccaagccattcctctcactgcctac
ggaccaatggcggcggcagcggcggcagcggctgtggttcgagggacaggttcgactccc
agccgcacagggggcttcctggggaccaccagccccggccccatggccgagctctacggg
gcggccaaccaggactcgggggtcagcagttacatcagcgccgccagccctgcccccagc
accggcttcggccacagtcttgggcgccccagcctgcagctgactgaggaccacgagtga

>gi568815586f:120338127_120540534|GENSCAN_predicted_peptide_2|64_aa
MGRARWLTPVIPALLEAEVPIMHPLSACSLCHPVNALVRSRDADWLRAGPWAQRCVSIIV
RDCE

>gi568815586f:120338127_120540534|GENSCAN_predicted_CDS_2|195_bp
atgggccgggcacggtggctcacacctgtaatcccagcacttttggaggctgaggtcccc
atcatgcacccgctcagtgcttgttctctctgccatcctgtcaatgcccttgtgagatca
cgtgatgccgactggctccgagctgggccctgggctcagcgctgtgtgagcatcattgta
cgggactgtgaatag

>gi568815586f:120338127_120540534|GENSCAN_predicted_peptide_3|109_aa
MAVVGVSSVSRLLGRSRPQLGRPMSSGAHGEEGSARMWKTLTFFVALPGVAVSMLNVYLK
SHHGEHERPEFIAYPHLRIRTKKLAFELQVSVQVEKKLALVISVSTVKV

>gi568815586f:120338127_120540534|GENSCAN_predicted_CDS_3|330_bp
atggcggtagttggtgtgtcctcggtttctcggctgctgggtcggtcccgcccacagctg
gggcggcctatgtcgagtggcgcccatggcgaagagggctcagctcgcatgtggaagact
ctcaccttcttcgtcgcgctccccggggtggcagtcagcatgctgaatgtgtacctgaag
tcgcaccacggagagcacgagagacccgagttcatcgcctacccccatctccgcatcagg
accaagaaattagcatttgagcttcaagtcagtgtccaagttgaaaagaaattggcatta
gttatttctgtttccacagtgaaggtctag

>gi568815586f:120338127_120540534|GENSCAN_predicted_peptide_4|76_aa
MNSVGEACTDMKREYDQCFNRWFAEKFLKGDSSGDPCTDLFKRYQQCVQKAIKEKEIPIE
GLEFMGHGKEKPENSS

>gi568815586f:120338127_120540534|GENSCAN_predicted_CDS_4|231_bp
atgaacagtgtgggggaggcatgcacggacatgaagcgcgagtacgaccagtgcttcaat
cgctggttcgccgagaaatttctcaagggggacagctccggggacccgtgcaccgacctc
ttcaagcgctaccagcagtgtgttcagaaagcaataaaggagaaagagattcctattgaa
ggactggagttcatgggccatggcaaagaaaagcctgaaaattcttcttga

>gi568815586f:120338127_120540534|GENSCAN_predicted_peptide_5|121_aa
MWSRLVWLGLRAPLGGRQGFTSKADPQGSGRITAAVIEHLERLALVDFGSREAVARLEKA
IAFADRLRAVDTDGVEPMESVLEDRCLYLRSDNVVEGNCADELLQNSHRVVEEYFVAPPG
R

>gi568815586f:120338127_120540534|GENSCAN_predicted_CDS_5|366_bp
atgtggtcgcggttggtgtggctgggccttcgggcccctctgggcgggcgccagggcttc
acctccaaggcggatcctcagggcagtggccggatcacggctgcggtgatcgagcacctg
gagcgtctagcgcttgtggacttcggcagccgcgaggcagtggcgcgactggagaaagct
atcgccttcgccgaccggctacgcgccgtggacacagacggggtggagcccatggaatcg
gtcctggaggacagatgtctatacctgagatccgacaatgtggtagaaggcaactgtgct
gatgaattactacaaaactcccatcgcgtcgtggaggagtactttgtggcccccccaggt
aggtga

>gi568815586f:120338127_120540534|GENSCAN_predicted_peptide_6|193_aa
MSGWADERGGEGDGRIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFE
DPRDAEDAIYGRNGYDYGQCRLRVEFPRTYGGRGSWQDLKDHMREAGDVCYADVQKDGVG
MVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRVYPERSTSYGYSRSRSGSRGRDSPYQS
RGSPHYFSPFRPY

>gi568815586f:120338127_120540534|GENSCAN_predicted_CDS_6|582_bp
atgtcgggctgggcggacgagcgcggcggcgagggcgacgggcgcatctacgtggggaac
cttccgaccgacgtgcgcgagaaggacttggaggacctgttctacaagtacggccgcatc
cgcgagatcgagctcaagaaccggcacggcctcgtgcccttcgccttcgtgcgcttcgag
gacccccgagatgcagaggatgctatttatggaagaaatggttatgattatggccagtgt
cggcttcgtgtggagttccccaggacttatggaggtcggggcagctggcaggacctgaag
gatcacatgcgagaagctggggatgtctgttatgctgatgtgcagaaggatggagtgggg
atggtcgagtatctcagaaaagaagacatggaatatgccctgcgtaaactggatgacacc
aaattccgctctcatgagggtgaaacttcctacatccgagtttatcctgagagaagcacc
agctatggctactcacggtctcggtctgggtcaaggggccgtgactctccataccaaagc
aggggttccccacactacttctctcctttcaggccctactga

>gi568815586f:120338127_120540534|GENSCAN_predicted_peptide_7|89_aa
MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGR
NFGSYVTHETKHFIYFYLGQVAILLFKSG

>gi568815586f:120338127_120540534|GENSCAN_predicted_CDS_7|270_bp
atgtgcgaccgaaaggccgtgatcaaaaatgcggacatgtcggaagagatgcaacaggac
tcggtggagtgcgctactcaggcgctggagaaatacaacatagagaaggacattgcggct
catatcaagaaggaatttgacaagaagtacaatcccacctggcattgcatcgtggggagg
aacttcggtagttatgtgacacatgaaaccaaacacttcatctacttctacctgggccaa
gtggccattcttctgttcaaatctggttaa

>gi568815586f:120338127_120540534|GENSCAN_predicted_peptide_8|382_aa
MRFAKKHNKKGLKKMQANSARATSARADAIKALVKPKEVKPEIPKGVSRKLDPLAYIAHP
QAWEMCSFLHCQGAQAMSVKGQGQRSNQGPGCSSSLGSQRCPDTYEGFRVDISVCQCEDR
RTVYQVFESVAKKYDVMNDMMSLGIHRVWKDLLLWKMHPLPGTQLLDVAGGTGDIAFRFL
NYVQSQHQRKQKRQLRAQQNLSWEEIAKEYQNEEDSLGGSRVVVCDINKEMLKVGKQKAL
AQGYRAGLAWVLGDAEELPFDDDKFDIYTIAFGIRNVTHIDQALQEAHRVLKPGGRFLCL
EFSQVNNPLISRLYDLYSFQVIPVLGEVIAGDWKSYQYLVESIRRFPSQEEFKDMIEDAG
FHKVTYESLTSGIVAIHSGFKL

>gi568815586f:120338127_120540534|GENSCAN_predicted_CDS_8|1149_bp
atgcgctttgccaagaagcacaacaagaaaggcctaaaaaagatgcaggccaacagtgcc
agggccacgagtgcacgtgctgacgctatcaaggcccttgtaaagcccaaggaggttaag
cccgagatcccaaagggtgtcagccgcaagctcgatccacttgcctacattgcccacccc
caggcttgggaaatgtgctcattcctgcattgccaaggggctcaagctatgtcggtcaaa
ggccaaggccaaagatcaaaccaaggcccaggctgcagctccagcttaggctcccaaagg
tgcccggacacctacgaaggcttcagagtagatatctctgtctgccaatgtgaggacaga
aggactgtctatcaggtgtttgaaagtgtggctaagaagtatgatgtgatgaatgatatg
atgagtcttggtatccatcgtgtttggaaggatttgctgctctggaagatgcacccgctt
cctgggacccagctgcttgatgttgctggaggcacaggtgacattgcattccggttcctt
aattatgttcagtcccagcatcagagaaaacagaagaggcagttaagggcccaacaaaat
ttatcctgggaagaaattgccaaagagtaccagaatgaagaagattccttgggcgggtct
cgtgtcgtggtgtgtgacatcaacaaggagatgctaaaggttggaaagcagaaagccttg
gctcaaggatacagagctggacttgcatgggtattaggagatgctgaagaactgcccttt
gatgatgacaagtttgatatttacaccattgcctttgggatccggaatgtcacacacatt
gatcaggcactccaggaagctcatcgggtgctgaaaccaggaggacggtttctctgtctg
gaatttagccaagtgaacaatcccctcatatccaggctttatgatctatatagcttccag
gtcatccctgtcctgggagaggtcatcgctggagactggaagtcctatcagtaccttgta
gagagtatccgaaggtttccgtctcaggaagagttcaaggacatgatagaagatgcaggc
tttcacaaggtgacttacgaaagtctaacatcaggcattgtggccattcattctggcttc
aaactttaa

>gi568815586f:120338127_120540534|GENSCAN_predicted_peptide_9|237_aa
MKMLIMLEVKFKLSVSGVIGEIDDCGNIDTAATGETLDIQPEELQEDELTNMNKKWSCDK
KVEDVPEEVMPAKTFTLKEFLEVFHNIESTKDKISEVDKNLERNMAICQGIEKIFHTTRS
PSGFFEMLFGDSSPFPEQFEKPRKETGKNVAMKAENRCRRRPPPALNAMSLGPRRARSAP
TAVAAEAPVDAAELPQRRRHRLRHGQEQRLQQLLRLFGQQQRATAAPLRLGGASRRV

>gi568815586f:120338127_120540534|GENSCAN_predicted_CDS_9|714_bp
atgaaaatgctgataatgctggaagtgaaattcaaattgagtgtcagtggagttatagga
gaaatagatgactgtgggaatattgacactgctgccactggagagactctagacatacag
ccagaggaactgcaggaagatgaacttaccaacatgaacaagaaatggagctgtgacaaa
aaggttgaagatgtcccagaagaagtgatgccagcaaaaactttcacattaaaggagttc
ttggaggtatttcataacattgaaagcacaaaggataaaatatcagaagtagataaaaac
ttagaaagaaatatggcaatttgccaaggcatagaaaagatatttcatacgacaagaagt
ccatccgggttctttgagatgctgtttggcgactcgtcgccattcccggagcagtttgag
aagccaaggaaggaaacagggaaaaatgtcgccatgaaggccgagaaccgctgccgccgc
cgacccccgccggccctgaacgccatgagcctgggtccccgccgcgcccgctccgctccg
actgccgtcgccgccgaggcccccgttgatgccgctgagctcccccaacgccgccgccac
cgcctccgacatggacaagaacagcggctccaacagctcctccgcctcttcgggcagcag
caaagggcaacagccgccccgctccgcctcggcggggccagccggcgagtctaa