GENSCAN 1.0	Date run:  6-Nov-116	Time: 14:36:39

Sequence gi568815585r:46734840_46995906 : 261067 bp : 38.56% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.09 PlyA -    304    299    6                               1.05
 1.08 Term -   6039   5898  142  2  1   53   47   109 0.794  -0.28
 1.07 Intr -   7138   7073   66  0  0   27   97    83 0.443   0.20
 1.06 Intr -   7328   7215  114  1  0   72   89    80 0.805   5.14
 1.05 Intr -   7605   7489  117  2  0   92   25    82 0.336   0.96
 1.04 Intr -  12250  12089  162  0  0  111   38   104 0.258   5.87
 1.03 Intr -  17606  17426  181  0  1   83   52    91 0.251   3.00
 1.02 Intr -  27335  27190  146  1  2   64   73    92 0.583   4.31
 1.01 Init -  27596  27439  158  2  2   65   56   131 0.572   7.03
 1.00 Prom -  31197  31158   40                              -6.15

 2.06 PlyA -  31565  31560    6                               1.05
 2.05 Term -  31982  31759  224  0  2  -34   39   211 0.004   0.10
 2.04 Intr -  42784  42613  172  1  1  118    6   182 0.092  11.59
 2.03 Intr -  47952  47828  125  1  2   36   76   168 0.916   9.78
 2.02 Intr -  49511  49413   99  0  0   83   99    34 0.873   3.16
 2.01 Init -  52251  52182   70  0  1   58  111    30 0.860   3.56
 2.00 Prom -  55162  55123   40                              -7.15

 3.00 Prom +  59143  59182   40                              -5.35
 3.01 Init +  61679  61774   96  1  0   65  109    91 0.362   9.26
 3.02 Term +  62033  62305  273  1  0   31   42   161 0.599   0.29
 3.03 PlyA +  62640  62645    6                               1.05

 4.11 PlyA -  63368  63363    6                               1.05
 4.10 Term -  69294  69247   48  0  0  105   40    46 0.367  -2.17
 4.09 Intr -  83508  83395  114  0  0  108   47    44 0.350   2.02
 4.08 Intr -  83789  83643  147  2  0   80   66    44 0.076   0.91
 4.07 Intr - 100800 100013  788  1  2  108  105   498 0.185  43.76
 4.06 Intr - 108971 108863  109  2  1   69  106    17 0.060   0.54
 4.05 Intr - 123665 123577   89  0  2   72  103    10 0.035  -0.33
 4.04 Intr - 132605 132477  129  0  0    6  101    79 0.003   0.75
 4.03 Intr - 142842 142750   93  1  0   90   86    41 0.062   3.12
 4.02 Intr - 157751 157551  201  0  0  115   97   127 0.775  14.64
 4.01 Init - 161067 160656  412  0  1   74  101   216 0.929  18.22
 4.00 Prom - 190441 190402   40                              -3.35

 5.03 PlyA - 191104 191099    6                               1.05
 5.02 Term - 201610 201099  512  2  2   14   36   357 0.102  16.65
 5.01 Init - 227639 227555   85  2  1   99   31   101 0.483   6.53
 5.00 Prom - 228379 228340   40                              -6.65

 6.03 PlyA - 228979 228974    6                               1.05
 6.02 Term - 229291 229121  171  1  0   59   36   155 0.522   4.24
 6.01 Intr - 256754 256589  166  1  1   60   71   135 0.394   8.04

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  42784  42596  189  1  0  118   33   170 0.907  10.97


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815585r:46734840_46995906|GENSCAN_predicted_peptide_1|361_aa
MEAEEFHDMPSESWRTRGAGSVAQSKSEGLRSREASGVTLSLTPETGNLGDCSSSRGLEN
LQFRRTGEASAPASGETENSPFLCLSVLSEPLADWVVPALIETSPHLPKSGGQPLPWLML
VCADCTLNPPPGGVFSFASPSTFVLQTVAAAALKTSNGFSRRPPEEAQRCPQITLLRLEG
CKKTHTGKQKPYTSMAILVILSQDWNEDSGGNYTLRKFGRNPIEWPSRQCEYVYTSNLVS
SGIIKVLYRSSWAKMAAAHREGEEELRGTAAGTMWMRKHAVCIHFAVVVVVFHFKTREIT
EDMTGMEVCKAKAQSHHVRKQNTYFSANCKLRGSVFCVDFQQPIAVRKQTIVSHAEFLNR
K

>gi568815585r:46734840_46995906|GENSCAN_predicted_CDS_1|1086_bp
atggaggctgaggagttccacgatatgccatctgagagctggagaaccagaggagctggt
agtgtggctcaatccaagtctgaaggcctgagaagcagggaagccagtggtgtcactctc
agtctgacgccggagactgggaacctgggggactgcagttctagcagagggctggagaac
ctgcagttcaggagaacaggagaagccagtgccccagcttcaggagaaacagagaattca
cctttcctctgcctttctgttctatctgagcccttggccgattgggtggtgcccgccctc
attgaaacctccccccatcttcccaagagtggagggcagccattgccttggttgatgttg
gtctgtgctgactgcacactgaatcctcctcctggtggtgtcttttcttttgcgtccccc
tctacatttgtcttacaaactgtggctgctgctgctctaaaaacttccaatggcttttcg
aggagaccccctgaggaagcccagaggtgccctcagattactttgctgaggttggaggga
tgtaagaagactcacacaggaaaacagaaaccttatacaagcatggccattctggttatt
ctatcacaggattggaatgaagactctggtgggaattacaccttgaggaaatttgggagg
aatccaatcgaatggccatcaaggcagtgtgagtacgtgtacacgtccaacttggtcagt
agtggtattattaaagttttgtatagatcaagttgggccaaaatggcagcagctcaccgg
gagggagaggaggaactgcgtggcactgctgctggcactatgtggatgaggaagcatgcg
gtgtgcatacactttgcagtcgtcgtcgttgtatttcacttcaaaactcgagagataact
gaagacatgacagggatggaagtttgcaaggcaaaggctcaaagtcaccatgtaaggaag
cagaacacctatttctcagctaactgcaaactaagaggctcagttttctgcgttgacttt
cagcagcctattgctgtcagaaagcaaacaattgtctcacatgctgaattcctgaaccgg
aaatga

>gi568815585r:46734840_46995906|GENSCAN_predicted_peptide_2|229_aa
MKFAVYLPPKAETGKCPALYWLSGLTCTEQNFISKSGYHQSASEHGLVVIAPDTSPRGCN
IKGEDESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEEAYDATHLVKSYPGSQLDILIDQ
GKDDQFLLDGQLLPDNFIAACTEKKIPVVFRLQEAKLGFRMKKGNVTVGVPVMGMATAVA
KKTLAEVAGGVVGGSKDAAMATAAQGTMTKEASTTVEMEDKVLEPVRVS

>gi568815585r:46734840_46995906|GENSCAN_predicted_CDS_2|690_bp
atgaaatttgctgtctacttaccaccaaaggcagaaacaggaaagtgccctgcactgtat
tggctctcaggtttaacttgcacagagcaaaattttatatcaaaatctggttatcatcag
tctgcttcagaacatggtcttgttgtcattgctccagataccagccctcgtggctgcaat
attaaaggtgaagatgagagctgggactttggcactggtgctggattttatgttgatgcc
actgaagatccttggaaaaccaactacagaatgtactcttatgtcacagaggaggcttat
gatgctacccaccttgtgaaatcctatccaggatctcagctggacatactaattgatcaa
gggaaagatgaccagtttcttttagatggacagttactccctgataacttcatagctgcc
tgtacagaaaagaaaatccccgttgtttttcgattgcaagaggcaaaattggggtttcgg
atgaagaaaggaaatgtcactgttggtgttccagtgatggggatggcaacagcagtagct
aagaagacattggcagaggttgccgggggggtggtggggggaagtaaagatgcagcgatg
gccacagcagcacaggggaccatgacaaaagaggcatccactacagtcgaaatggaggac
aaagtgttagaaccagtaagagtttcgtaa

>gi568815585r:46734840_46995906|GENSCAN_predicted_peptide_3|122_aa
MTSSPPQRSESILRPEQILSNSKDTCSPRHHQVGGSEKEKGLEARLRVTGKGPWPPVMDG
GAQGPGSPSLRSCLRIPAPQDSASAPITPSRAAAAGRLTTSRPLPEPSLTYGGGVTRRSG
PK

>gi568815585r:46734840_46995906|GENSCAN_predicted_CDS_3|369_bp
atgacttccagtcccccacagcgctctgagagcattttacgacccgaacagattttgtca
aactccaaagacacgtgctcccctcggcaccatcaggttggaggctcagagaaggaaaag
ggattagaggcgaggctccgggtcacgggaaaaggtccttggcctcctgtcatggatggt
ggcgcccaaggcccagggtcgccgtctctgcgctcgtgcctgcggatacctgcaccgcag
gactcggcgtccgccccgatcacgcctagccgtgccgcagccgcaggaaggctgacaacg
tccaggcctctacccgaacccagtcttacctacggtggcggagtgaccagaagaagcggg
ccgaagtaa

>gi568815585r:46734840_46995906|GENSCAN_predicted_peptide_4|709_aa
MDILCEENTSLSSTTNSLMQLNDDTRLYSNDFNSGEANTSDAFNWTVDSENRTNLSCEGC
LSPSCLSLLHLQEKNWSALLTAVVIILTIAGNILVIMAVSLEKKLQNATNYFLMSLAIAD
MLLGFLVMPVSMLTILYGYRWPLPSKLCAVWIYLDVLFSTASIMHLCAISLDRYVAIQNP
IHHSRFNSRTKAFLKIIAVWTISVGHKFSECKEWKAKQKMYFILSTNYVIENAYPVNSGT
RQIQIENDPFPEMLLTCQVIWITFIFHDEGNQSASAFKCIKHDRQNPSRIIPCLPSTALC
TTCNSSWHPPLLSPCYIEILEPLLIGVAFQGKESHQNWSRAKMKSISMPIPVFGLQDDSK
VFKEGSCLLADDNFVLIGSFVSFFIPLTIMVITYFLTIKSLQKEATLCVSDLGTRAKLAS
FSFLPQSSLSSEKLFQRSIHREPGSYTGRRTMQSISNEQKACKVLGIVFFLFVVMWCPFF
ITNIMAVICKESCNEDVIGALLNVFVWIGYLSSAVNPLVYTLFNKTYRSAFSRYIQCQYK
ENKKPLQLILVNTIPALAYKSSQLQMGQKKNSKQDAKTTDNDCSMVALGKQHSEEASKDN
SDGVNEKLSVERILLPAAAGHLPHLSILCSLSYLPILCPALAGPRAFMDLTGSPEEPFMA
PGSGPNPALRSEQAGVKRGQAVGADTPEPARTEGHIDVIASFRWTLGWP

>gi568815585r:46734840_46995906|GENSCAN_predicted_CDS_4|2130_bp
atggatattctttgtgaagaaaatacttctttgagctcaactacgaactccctaatgcaa
ttaaatgatgacaccaggctctacagtaatgactttaactccggagaagctaacacttct
gatgcatttaactggacagtcgactctgaaaatcgaaccaacctttcctgtgaagggtgc
ctctcaccgtcgtgtctctccttacttcatctccaggaaaaaaactggtctgctttactg
acagccgtagtgattattctaactattgctggaaacatactcgtcatcatggcagtgtcc
ctagagaaaaagctgcagaatgccaccaactatttcctgatgtcacttgccatagctgat
atgctgctgggtttccttgtcatgcccgtgtccatgttaaccatcctgtatgggtaccgg
tggcctctgccgagcaagctttgtgcagtctggatttacctggacgtgctcttctccacg
gcctccatcatgcacctctgcgccatctcgctggaccgctacgtcgccatccagaatccc
atccaccacagccgcttcaactccagaactaaggcatttctgaaaatcattgctgtttgg
accatatcagtaggtcacaaattttcagagtgcaaggaatggaaagcaaagcagaaaatg
tacttcatcttgagtacaaactatgtaatagaaaatgcctatccagtaaacagtggaaca
agacagattcaaattgaaaatgatccctttcctgagatgcttttaacttgtcaagttatt
tggataaccttcattttccatgatgaaggaaatcagtcagcgtcagcctttaaatgcata
aaacatgacaggcaaaacccatcaagaattattccctgccttccatccacagccctctgt
actacctgcaattcctcatggcatccgccactcctaagcccctgctacatagaaatcctg
gagcccctactcattggtgtagcatttcagggaaaggaaagtcatcaaaattggtccagg
gcaaaaatgaaaagtatatccatgccaataccagtctttgggctacaggacgattcgaag
gtctttaaggaggggagttgcttactcgccgatgataactttgtcctgatcggctctttt
gtgtcatttttcattcccttaaccatcatggtgatcacctactttctaactatcaagtca
ctccagaaagaagctactttgtgtgtaagtgatcttggcacacgggccaaattagcttct
ttcagcttcctccctcagagttctttgtcttcagaaaagctcttccagcggtcgatccat
agggagccagggtcctacacaggcaggaggactatgcagtccatcagcaatgagcaaaag
gcatgcaaggtgctgggcatcgtcttcttcctgtttgtggtgatgtggtgccctttcttc
atcacaaacatcatggccgtcatctgcaaagagtcctgcaatgaggatgtcattggggcc
ctgctcaatgtgtttgtttggatcggttatctctcttcagcagtcaacccactagtctac
acactgttcaacaagacctataggtcagccttttcacggtatattcagtgtcagtacaag
gaaaacaaaaaaccattgcagttaattttagtgaacacaataccggctttggcctacaag
tctagccaacttcaaatgggacaaaaaaagaattcaaagcaagatgccaagacaacagat
aatgactgctcaatggttgctctaggaaagcagcattctgaagaggcttctaaagacaat
agcgacggagtgaatgaaaagctctcagtggagaggatactcctccctgcagctgctggt
catcttcctcatctctccatcctctgctctcttagttatctgcccatcctctgccctgct
ctggctgggcccagggcttttatggacctcacaggcagcccagaagagccattcatggcc
ccggggtctggccccaaccctgctctgagatcagagcaggcaggagtgaagagaggccag
gcagtgggagcagacacccccgagcctgcaaggactgaggggcacatagatgtcattgct
tccttccgatggactctgggctggccttag

>gi568815585r:46734840_46995906|GENSCAN_predicted_peptide_5|198_aa
MDQLLHESEIMHIVIIRDHTFQPSRPSGGRCGGRGASGNRGCVRHLRASWSSGWAWAWRA
PTRSSQPALLAPGNEGLSTRASGCGGCTGSPSSASPPALHSISHRALAAFPRGRARDLQP
AMPEPPTHSMGSCAAQASPTSTTPCSMAPSPIDHPRAEECERTAWDWQAAPPAALVWDPL
GEASWAPESGGDMESLYI

>gi568815585r:46734840_46995906|GENSCAN_predicted_CDS_5|597_bp
atggatcagcttctgcatgagtcagagatcatgcacattgtcatcatccgggatcacact
tttcaaccatcaagaccaagtggagggaggtgtggaggtagaggcgccagcgggaaccgg
ggctgtgtgcggcacttgcgggccagctggagttctgggtgggcatgggcttggcgggcc
cccactcggagcagccagccagccctgctggccccgggcaatgagggacttagcacccgg
gccagtggctgcggagggtgcactgggtcccccagcagtgccagcccaccggcgctgcac
tcgatttctcaccgagccttagctgccttcccgcggggcagggctcgggacctgcagccc
gccatgcctgagcctcccacccactccatgggctcctgtgcggcccaagcctccccaacg
agcaccactccctgctccatggcgccaagtcccatcgaccacccaagggctgaggaatgc
gagcgcacggcgtgggactggcaggcagctccacctgcagccctggtgtgggatccacta
ggtgaagccagctgggctcctgagtctggtggggacatggagagtctttatatctag

>gi568815585r:46734840_46995906|GENSCAN_predicted_peptide_6|112_aa
XSTEAEAVNRNTSDEGSVNLAPNCNSFSGATLSQWLYIFAFKACMASRVDDPLQDEWEKD
LARFLLAIKGAESLALCSSSATPTAAHWAHCVACWIWGQGNRYCPVDALAVL

>gi568815585r:46734840_46995906|GENSCAN_predicted_CDS_6|339_bp
nngagcactgaggctgaagctgttaatagaaacacctccgatgagggctctgtaaatcta
gctcccaactgcaactctttcagtggtgcaacactgagccagtggctatacatctttgcc
ttcaaggcctgcatggcttccagggtagatgatcccctacaagacgagtgggagaaggat
ctggctcgcttcctgcttgctataaaaggtgctgagtccttggccctgtgttcctcttct
gcaacaccaaccgctgcccactgggctcattgcgtggcctgttggatttggggccaagga
aaccggtactgccctgttgatgctcttgctgtgctgtaa