GENSCAN 1.0	Date run:  7-Nov-116	Time: 21:22:00

Sequence gi568815585r:100439904_100640248 : 200345 bp : 44.01% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   9349   9402   54  0  0   97  103    22 0.397   3.78
 1.02 Term +  16741  16920  180  0  0   27   48   202 0.994   7.71
 1.03 PlyA +  20375  20380    6                               1.05

 2.00 Prom +  22394  22433   40                              -5.06
 2.01 Init +  23683  23754   72  0  0   33  113    66 0.481   4.67
 2.02 Term +  30090  30296  207  2  0   -6   41   230 0.485   6.24
 2.03 PlyA +  30727  30732    6                               1.05

 3.03 PlyA -  31348  31343    6                               1.05
 3.02 Term -  56753  56574  180  2  0   96   48   124 0.990   6.81
 3.01 Init -  59113  59030   84  1  0   50   86    86 0.799   5.42
 3.00 Prom -  70132  70093   40                              -3.16

 4.00 Prom +  70202  70241   40                              -5.16
 4.01 Init +  72942  72980   39  2  0   22   91    46 0.339  -1.46
 4.02 Intr +  75524  75664  141  1  0   60   91    88 0.501   6.85
 4.03 Intr +  79773  79820   48  2  0   77   77    40 0.449   0.68
 4.04 Intr +  87772  87849   78  0  0  131  113    53 0.690  11.85
 4.05 Term +  90195  90263   69  2  0   53   49    69 0.306  -2.56
 4.06 PlyA +  90509  90514    6                               1.05

 5.08 PlyA -  90668  90663    6                               1.05
 5.07 Term -  92698  92227  472  0  1  139   49   861 0.997  81.70
 5.06 Intr -  93871  93660  212  1  2   63   37   100 0.668   0.11
 5.05 Intr -  95012  94832  181  1  1   93   47    50 0.596   1.27
 5.04 Intr - 100380 100002  379  1  1    1   75   389 0.009  22.92
 5.03 Intr - 104144 104029  116  1  2   49   69   104 0.058   4.69
 5.02 Intr - 113640 113526  115  1  1  114   74    96 0.054  10.31
 5.01 Init - 129613 129535   79  1  1   61   77    77 0.007   3.15
 5.00 Prom - 132923 132884   40                              -3.76

 6.16 PlyA - 133072 133067    6                               1.05
 6.15 Term - 148784 148508  277  1  1   90   48   102 0.285   1.33
 6.14 Intr - 157241 157163   79  0  1   90   66    39 0.007   0.51
 6.13 Intr - 166524 166455   70  0  1   95   86    27 0.288   1.95
 6.12 Intr - 172607 172495  113  0  2  109  100    56 0.702   9.00
 6.11 Intr - 174527 174413  115  2  1   69   92   119 0.956  10.42
 6.10 Intr - 184598 184506   93  2  0  -14   86   160 0.973   5.76
 6.09 Intr - 185773 185632  142  0  1   75  107    74 0.999   8.36
 6.08 Intr - 185989 185882  108  0  0   90   72    75 0.978   5.50
 6.07 Intr - 186247 186168   80  1  2  110   86   184 0.976  18.75
 6.06 Intr - 195033 194902  132  0  0   63   77    75 0.913   4.74
 6.05 Intr - 195292 195121  172  0  1   57   64   156 0.767  10.05
 6.04 Intr - 196831 196629  203  1  2   54  116   109 0.985   8.38
 6.03 Intr - 197799 197635  165  0  0   74   96   185 0.868  18.06
 6.02 Intr - 198119 198027   93  2  0  104  105    91 0.976  12.56
 6.01 Intr - 198841 198778   64  0  1   76   88    52 0.726   2.72

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  66331  66219  113  2  2   66   48   112 0.923   3.72
S.002 Init - 113670 113641   30  0  0  114   97    18 0.833   3.45


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815585r:100439904_100640248|GENSCAN_predicted_peptide_1|77_aa
CLSREAGGNMSIQFLGTVVAEAEREKAAYVSVFFYALIRKIKDFKTFTISSTAIYYELQR
GTRSYGRNMKVDKERDR

>gi568815585r:100439904_100640248|GENSCAN_predicted_CDS_1|234_bp
tgtctttctcgagaagcaggtggaaacatgagcattcagtttcttggtacagtggtagcc
gaagctgagagagagaaggcagcatacgtcagcgttttcttctatgcacttataagaaag
atcaaagactttaagacttttactatttcttctaccgctatctactacgagcttcaaaga
ggaaccaggagttacgggaggaacatgaaagtggacaaggagcgtgaccgttga

>gi568815585r:100439904_100640248|GENSCAN_predicted_peptide_2|92_aa
MPRDIYDIREISGLESKKKIKSEHVKNKTIPLTDNTVVAEHLGKYFQETSWFLRRFHLSV
AHHATKNRVGFLEMGTPGYRGEHVNQLIRQLN

>gi568815585r:100439904_100640248|GENSCAN_predicted_CDS_2|279_bp
atgccaagagacatctatgatataagggaaatttctggtctggagagcaagaagaagatt
aagagtgagcacgtcaagaataagaccatccctctgacagacaacacagtggttgcggag
cacctggggaagtatttccaggagacttcatggttcttgcgtcgtttccacctctcagtg
gcccatcatgctaccaaaaatagagtgggcttcctcgagatgggcacacctggctatcgg
ggtgaacacgtcaatcagctcatccgccagctgaactag

>gi568815585r:100439904_100640248|GENSCAN_predicted_peptide_3|87_aa
MRVEVLSSTAKFSEPENQINALLKGFDKINGKRKVVTSEWRKGQTPPEPNDQSDAINSGT
KRNVNMRLPRGDNEDNAAAPPLRSCQK

>gi568815585r:100439904_100640248|GENSCAN_predicted_CDS_3|264_bp
atgcgggtggaagtcttgtcttccactgccaagttctcagaaccagagaaccaaatcaat
gccttgttaaaaggttttgacaagataaatggaaaaaggaaagtagtaacttcagagtgg
agaaagggacaaacaccacctgaaccaaatgatcaaagtgatgccattaacagtgggaca
aagagaaacgtgaacatgcgcctcccgagaggggacaacgaggacaacgcagcagcacca
ccgttacgttcctgccaaaaatga

>gi568815585r:100439904_100640248|GENSCAN_predicted_peptide_4|124_aa
MPTVKPSLYPTVQYKVNILTRLAAELNKFMLEKVTEDTSSVLRSPMPGVVVAVSVKPGDA
PHVTELIADHTELANLVAEGQEICVIEAMKMQNSMTAGKTGTVKSVHCQAGDTVGEGDLL
VELE

>gi568815585r:100439904_100640248|GENSCAN_predicted_CDS_4|375_bp
atgcccacggtgaaaccgagcttgtaccccacggtccagtacaaggtgaatatcttaacc
agacttgccgcagaattgaacaaatttatgctggaaaaagtgactgaggacacaagcagt
gttctgcgttccccgatgcccggagtggtggtggccgtctctgtcaagcctggagacgcg
cctcatgtaactgagcttatagccgaccatacagaactggcaaacttggtagcagaaggt
caagaaatttgtgtgattgaagccatgaaaatgcagaatagtatgacagctgggaaaact
ggcacggtgaaatctgtgcactgtcaagctggagacacagttggagaaggggatctgctc
gtggagctggaatga

>gi568815585r:100439904_100640248|GENSCAN_predicted_peptide_5|517_aa
MQPRDMVPPCLPVAAAPAVAKRVQCKGKLVLQCVPLSGRSQVVLLMVNAIVLLPLFILVA
IEYPRMAAFAQGWHSVGLLVVTEGLEQQLVSLKPVYSRDHHALQKPTLSPVRASKMTKKR
RNNGRAKKGRGHVQPIRCTNCARCVPKDNAIKKFVIRNIVEAAAVRDISEASVFDAYVLP
KLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFRPAGAAPRPPPKPMSGAGRGRSHL
DEGREGAGDEVGELSLQQEIDKDPLGGALGAGSRGTKTTGMQAGIGGGEQSVAQTQASGK
YLPSRWSQDRCGESREAPLPSKTLEGETPEGVGAELRCVRLPGPEWNSVLKPGFSLQLDS
SSARMALVFVYGTLKRGQPNHRVLRDGAHGSAAFRARGRTLEPYPLVIAGEHNIPWLLHL
PGSGRLVEGEVYAVDERMLRFLDDFESCPALYQRTVLRVQLLEDRAPGAEEPPAPTAVQC
FVYSRATFPPEWAQLPHHDSYDSEGPHGLRYNPRENR

>gi568815585r:100439904_100640248|GENSCAN_predicted_CDS_5|1554_bp
atgcagcctcgggacatggtgcccccctgcctcccagttgctgcagctccagctgtggct
aaaagggtccagtgtaaaggtaaacttgtcctgcagtgtgtgcccttgtctggccgctct
caggtggtgctgctcatggtgaatgccatcgtgttgctgcccctattcattcttgttgcc
atagagtatcccagaatggctgcgtttgctcagggctggcacagtgtggggctgctggtg
gtcacagaaggactagagcagcagttggtgtccttgaaaccagtgtacagccgtgatcac
catgcccttcaaaagcccactctctctccggtccgtgcctccaagatgacaaagaaaaga
aggaacaatggtcgtgccaaaaagggccgcggccacgtgcagcctattcgctgcactaac
tgtgcccgatgcgtgcccaaggacaacgccattaagaaattcgtcattcgaaacatagtg
gaggccgcagcagtcagggacatttctgaagcgagcgtcttcgatgcctatgtgcttccc
aagctgtatgtgaagctacattactgtgtgagttgtgcaattcacagcaaagtagtcagg
aatcgatctcgtgaagcccgcaaggaccgaacacccccacctcgatttagacctgcgggt
gctgccccacgtcccccaccaaagcccatgtcaggcgctggtcggggcaggagccacctg
gatgaggggagagagggtgcaggagatgaggtgggagagttaagtctgcagcaggagatt
gacaaggaccctctgggtggtgcactgggggcaggatccaggggaacaaagacaacaggg
atgcaggcaggcattggaggaggagagcagtctgtggcccagacccaggcaagtggtaaa
tatttaccttcacgctggagccaagatcgctgcggggagtcccgtgaagcaccactgccc
tctaagaccttggaaggggaaacaccagaaggtgtgggtgctgagctccgctgcgtcaga
ctgccaggacctgagtggaactcagtgctgaaacctgggttctcactgcagctggatagc
agctctgcccggatggccctagtcttcgtgtacggcaccctgaagcggggtcagcccaac
cacagggtcctgcgggacggcgcccacggctccgcagcctttcgggcgcgcggccgcacg
ctggagccctacccgttggtgatcgcgggggagcacaacatcccgtggctgctgcacctg
cccggctcggggcgcctcgtggagggcgaggtctacgcggtagacgagcggatgctgcgc
tttctggatgacttcgagagttgcccggccctgtaccagcgcacggtgctgcgggtacag
ctgctggaggaccgggccccgggcgcagaggagccgccagcgcccaccgcggtgcagtgc
ttcgtgtacagcagggccaccttcccgccggagtgggcccagctcccgcaccatgacagc
tacgactccgaggggccgcacgggctgcgctacaacccccgggagaacagataa

>gi568815585r:100439904_100640248|GENSCAN_predicted_peptide_6|635_aa
XQLEGETKWECVPKFYNQTSKMGLNAVFDILVIGKFNVLEIVQKVLHKDKSLENLGMLRN
GGLLFRMTLLTSGGAGMLYVRWRIMGTGPPAFTEVDNPASFADSMLVRAVNYNYYYSLNA
WLLLCPWWLCFDWSMGCIPLIKSISDWRVIALAALWFCLIGLICQALCSEDGHKRRILTL
GLGFLVIPFLPASNLFFRVGFVVAERVLYLPSVGYCVLLTFGFGALSKHTKKKKLIAAVV
LGILFINTLRCVLRSGEWRSEEQLFRSALSVCPLNAKVHYNIGKNLADKGNQTAAIRYYR
EAVRLNPKYVHAMNNLGNILKERNELQEAEELLSLAVQIQPDFAAAWMNLGIVQNSLKRF
EAAEQSYRTAIKHRRKYPDCYYNLGRLLLVDGFQGYFMELERLAAQALRAGGPNGMATYA
DLNRHVDALNAWRNATVLKPEHSLAWNNMIILLDNTGNLAQAEAVGREALELIPNDHSLM
FSLANVLGKSQKYKESEALFLKAIKANPNAASYHGNLDYSWEIKTSACRVRVLTKALPKT
TSSRRGVLAPAGTWGVAPCAASGSRPQHSASPRVREEAWGAAGRRGQPEGGDGGPRNASS
IAPRGGHGRDCQNGQRAVKARNRLTHGRCFPVKEA

>gi568815585r:100439904_100640248|GENSCAN_predicted_CDS_6|1908_bp
nnccagctggaaggggaaaccaagtgggaatgtgtgcccaagttttacaaccaaacatcc
aaaatgggtttaaatgcggtatttgacatcttggtgataggcaaattcaatgttctggaa
attgtccagaaggtactacataaggacaagtcattagagaatctcggcatgctcaggaac
gggggcctcctcttcagaatgaccctgctcacctctggaggggctgggatgctctacgtg
cgctggaggatcatgggcacgggcccgccggccttcaccgaggtggacaacccggcctcc
tttgctgacagcatgctggtgagggccgtaaactacaattactactattcattgaatgcc
tggctgctgctgtgtccctggtggctgtgttttgattggtcaatgggctgcatccccctc
attaagtccatcagcgactggagggtaattgcacttgcagcactctggttctgcctaatt
ggcctgatatgccaagccctgtgctctgaagacggccacaagagaaggatccttactctg
ggcctgggatttctcgttatcccatttctccccgcgagtaacctgttcttccgagtgggc
ttcgtggtcgcagagcgtgtcctctacctccccagcgttgggtactgtgtgctgctgact
tttggattcggagccctgagcaaacataccaagaaaaagaaactcattgccgctgtcgtg
ctgggaatcttattcatcaacacgctgagatgtgtgctgcgcagcggcgagtggcggagt
gaggaacagcttttcagaagtgctctgtctgtgtgtcccctcaatgctaaggttcactac
aacattggcaaaaacctggctgataaaggcaaccagacagctgccatcagatactaccgg
gaagctgtaagattaaatcccaagtatgttcatgccatgaataatcttggaaatatctta
aaagaaaggaatgagctacaggaagctgaggagctgctgtctttggctgttcaaatacag
ccagactttgccgctgcgtggatgaatctaggcatagtgcagaatagcctgaaacggttt
gaagcagcagagcaaagttaccggacagcaattaaacacagaaggaaatacccagactgt
tactacaacctcgggcgtctgctgcttgtcgatggctttcaaggttacttcatggagctg
gagcgcttggctgcgcaggccctgagggctggcggtcccaatggcatggccacgtatgca
gatctcaatcgccacgtggatgccttgaatgcgtggagaaatgccaccgtgctgaaacca
gagcacagcctggcctggaacaacatgattatactcctcgacaatacaggtaatttagcc
caagctgaagcagttggaagagaggcactggaattaatacctaatgatcactctctcatg
ttctcgttggcaaacgtgctggggaaatcccagaaatacaaggaatctgaagctttattc
ctcaaggcaattaaagcaaatccaaatgctgcaagttaccatggtaatttggattattct
tgggaaattaaaacgtcagcatgtcgagtcagagtcttaacaaaggctctgccaaagacg
acatccagcaggcggggtgtcctggcgcccgcgggaacctggggcgtcgctccctgcgcg
gcgtccgggtcgaggccgcagcactcggcgtccccgcgggtgagggaggaggcctggggc
gccgccggccggcgaggccagccggagggaggggacggtggaccccgaaacgcgtcctcc
attgccccgcgcgggggccacgggcgcgattgccagaacgggcagagggcggtaaaagcc
aggaaccgcctcacgcacgggcgctgcttccctgtaaaggaagcgtga