GENSCAN 1.0	Date run:  2-Nov-116	Time: 23:56:36

Sequence gi568815585f:30327991_30528452 : 200462 bp : 43.96% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   5349   5427   79  2  1   69   39   104 0.675   4.82
 1.02 Term +  14395  14465   71  2  2   82   42    68 0.341  -0.30
 1.03 PlyA +  14900  14905    6                               1.05

 2.04 PlyA -  15352  15347    6                               1.05
 2.03 Term -  27171  26985  187  2  1   37   41   135 0.439   0.66
 2.02 Intr -  29831  29756   76  0  1  115  101     8 0.438   3.37
 2.01 Init -  40847  40712  136  2  1   64   61    98 0.560   4.72
 2.00 Prom -  41631  41592   40                              -2.96

 3.00 Prom +  44035  44074   40                              -2.56
 3.01 Init +  52734  52795   62  2  2   78   84    10 0.360  -0.23
 3.02 Intr +  54968  55057   90  2  0  116   59    65 0.180   5.51
 3.03 Term +  60281  60419  139  2  1    3   42   167 0.066   1.04
 3.04 PlyA +  60744  60749    6                               1.05

 4.05 PlyA -  60814  60809    6                               1.05
 4.04 Term -  60994  60980   15  1  0  122   48    18 0.859  -0.56
 4.03 Intr -  62184  62060  125  1  2   96   93    97 0.982  11.30
 4.02 Intr -  67397  67322   76  2  1  101   41    52 0.593   0.89
 4.01 Init -  67835  67479  357  2  0   85   37   140 0.696   5.71
 4.00 Prom -  75492  75453   40                              -4.46

 5.00 Prom +  85769  85808   40                              -2.96
 5.01 Sngl + 100001 100465  465  1  0   99   38   448 0.989  37.05
 5.02 PlyA + 101122 101127    6                               1.05

 6.03 PlyA - 102489 102484    6                               1.05
 6.02 Term - 118538 118476   63  2  0   98   48   121 0.580   6.99
 6.01 Init - 125096 125094    3  2  0  113   22     0 0.091  -4.10
 6.00 Prom - 131660 131621   40                              -1.76

 7.05 PlyA - 131888 131883    6                               1.05
 7.04 Term - 133543 133367  177  1  0   61   38   465 0.999  36.49
 7.03 Intr - 134722 134548  175  0  1   54  116   219 0.999  21.24
 7.02 Intr - 135362 135217  146  2  2   52   75   179 0.987  12.08
 7.01 Init - 135690 135541  150  0  0   85  116    74 0.834   9.94

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  80455  80153  303  1  0   82   38   177 0.940   5.94


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815585f:30327991_30528452|GENSCAN_predicted_peptide_1|49_aa
MEKQNYLVEKKKEEERKKKKKEEEKKAPFSALFSNAWLQNTASVAKHFP

>gi568815585f:30327991_30528452|GENSCAN_predicted_CDS_1|150_bp
atggagaaacagaactacttagtggaaaagaagaaagaggaagagaggaagaaaaagaaa
aaggaagaggagaaaaaagcgcctttctctgcactgttcagcaatgcctggctacagaac
acggccagtgtggccaagcattttccatga

>gi568815585f:30327991_30528452|GENSCAN_predicted_peptide_2|132_aa
MVHQLKATGVALALVGKDAGAYTGFAGEWGTEGLFQGLVHLVSVPDPKPWAGLQQNEGVL
SALRPMYHERCNSCNSDMRSKQFLLYQEESSSPFITLWFQDTVYISAPIAVQLEHTVRMN
ASLHQESRALRL

>gi568815585f:30327991_30528452|GENSCAN_predicted_CDS_2|399_bp
atggtgcatcagctcaaggcaactggtgtggctctggctctggtgggcaaagatgctggg
gcctacactggctttgcaggcgaatggggcacagagggcctctttcagggattggtgcat
ttggtctcagttccagacccaaaaccatgggctgggctgcagcaaaatgagggtgtactc
agtgcactgaggcccatgtaccatgagagatgtaactcgtgcaattctgacatgaggagc
aagcagttcttgctttatcaggaggaatcttcctctccctttatcaccctctggttccag
gataccgtgtacatttccgcccccatcgccgtgcagctggaacacactgtcagaatgaat
gcctcattgcatcaggaatccagagctcttcgtctgtaa

>gi568815585f:30327991_30528452|GENSCAN_predicted_peptide_3|96_aa
MDRRAPKLGLSPGFAQERIQGTIIALQLKQKAGFGRSAFLATGPYQQLLSFLGDKSKTLL
KKKKKEEEEGGRGGGGGGEEEEEVNRETQTEGYSTT

>gi568815585f:30327991_30528452|GENSCAN_predicted_CDS_3|291_bp
atggacaggcgagccccaaaactggggcttagcccgggctttgcccaggaaagaattcaa
gggacaatcattgctttgcaacttaaacagaaggcaggttttgggcggagtgccttcctt
gccacgggaccataccagcagctgctgtctttcctgggtgacaaaagcaagactctgttg
aagaagaagaagaaagaagaagaagaaggaggaagaggaggaggaggaggaggagaagaa
gaggaggaagtcaaccgagaaactcaaacagagggatattctacaacataa

>gi568815585f:30327991_30528452|GENSCAN_predicted_peptide_4|190_aa
MDFHFGKYKIVFVLPYETTGASGRRGCTVRCVTRLGNHVAQTSPTGFYCNNKLDLLIQIQ
VTTTAGSKSRVQVTWHTDAEADWQSLANAYYQEENPGIKDTNSVFIKQPGLQEKAFDVGN
FPNLPSVAAFSKPGGVLGCSIRSSGSTEPISLRTSMIVNKAVLSRERSVTTKDWDQGSWL
QASWSKSGKV

>gi568815585f:30327991_30528452|GENSCAN_predicted_CDS_4|573_bp
atggactttcactttggaaaatataaaatcgtgtttgttttaccttacgaaacaactgga
gcctctggaagacgaggctgtacggtgcgttgtgtaacccgcctggggaatcacgttgca
cagacaagtcccacaggcttttactgcaataataagcttgatcttcttattcaaatacaa
gtaacaaccacagccggctccaagtcacgtgtccaggtcacatggcacacagacgcagaa
gccgactggcaatcattagccaatgcttactaccaggaagaaaatcctggcattaaagac
acgaactcagtttttataaaacaaccaggactgcaagagaaggcatttgatgtggggaac
tttccaaacttgcccagcgtagccgccttttccaaacctggaggagtgctgggctgcagc
atccgcagctcaggaagtacagagcccatctccttgagaacgtccatgattgtcaacaaa
gctgtgctttcccgagaaaggtcagtcaccaccaaggactgggatcagggttcttggctg
caggcctcttggtctaagtccggcaaagtctaa

>gi568815585f:30327991_30528452|GENSCAN_predicted_peptide_5|154_aa
MAASRRLMKELEEIRKCGMENFRNIQVDEANLLTWQGLIVPDNPPYNKGAFRIEINFPAE
YPFKPPRITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHP
LRADLAEEYSNDRKKFCKNAEEFTKKYGEKRPVD

>gi568815585f:30327991_30528452|GENSCAN_predicted_CDS_5|465_bp
atggcggccagcaggaggctgatgaaggagcttgaagaaatccgcaaatgtggaatggaa
aacttccgtaacatccaggttgatgaagctaatttattgacttggcaagggcttattgtt
cctgacaaccctccgtataataagggggccttcagaatcgaaatcaactttccagcagag
tacccattcaaaccaccgaggatcacatttaaaacaaagatctatcacccgaacatcgac
gaaaaggggcaggtctgtctgccagtaattagtgctgaaaactggaagccagcaaccaaa
accgaccaagtaatccagtccctcatagcactggtgaatgacccgcagcccgagcacccg
cttcgggctgacctagctgaagaatactctaacgaccgtaaaaaattctgtaagaatgct
gaagagtttacaaagaaatatggggaaaagcgacctgtggactaa

>gi568815585f:30327991_30528452|GENSCAN_predicted_peptide_6|21_aa
MVEDNISKGKNEKPNNYLIDE

>gi568815585f:30327991_30528452|GENSCAN_predicted_CDS_6|66_bp
atggtcgaagacaacatctccaaaggtaaaaatgagaaacccaacaactacttgattgat
gagtag

>gi568815585f:30327991_30528452|GENSCAN_predicted_peptide_7|215_aa
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF
EDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL
SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK
SKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE

>gi568815585f:30327991_30528452|GENSCAN_predicted_CDS_7|648_bp
atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattttttgtg
caaacttgtcgggaggagcataagaagaagcacccagatgcttcagtcaacttctcagag
ttttctaagaagtgctcagagaggtggaagaccatgtctgctaaagagaaaggaaaattt
gaagatatggcaaaagcggacaaggcccgttatgaaagagaaatgaaaacctatatccct
cccaaaggggagacaaaaaagaagttcaaggatcccaatgcacccaagaggcctccttcg
gccttcttcctcttctgctctgagtatcgcccaaaaatcaaaggagaacatcctggcctg
tccattggtgatgttgcgaagaaactgggagagatgtggaataacactgctgcagatgac
aagcagccttatgaaaagaaggctgcgaagctgaaggaaaaatatgaaaaggatattgct
gcatatcgagctaaaggaaagcctgatgcagcaaaaaagggagttgtcaaggctgaaaaa
agcaagaaaaagaaggaagaggaggaagatgaggaagatgaagaggatgaggaggaggag
gaagatgaagaagatgaagatgaagaagaagatgatgatgatgaataa