GENSCAN 1.0	Date run:  5-Nov-116	Time: 17:16:28

Sequence gi568815585f:27548377_27765950 : 217574 bp : 39.76% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.08 Intr -   2115   1957  159  2  0   97   87    66 0.119   5.58
 1.07 Intr -   5063   4832  232  0  1  102   84   306 0.634  27.51
 1.06 Intr -   8037   7860  178  0  1   95   94   112 0.991  11.07
 1.05 Intr -  11609  11466  144  2  0   82  100    61 0.987   6.26
 1.04 Intr -  14405  14037  369  2  0   90   97   454 0.991  40.88
 1.03 Intr -  19463  19264  200  0  2   53   69   212 0.996  13.95
 1.02 Intr -  20900  20653  248  1  2   63   45   204 0.804   9.78
 1.01 Init -  33327  32921  407  0  2   60  115   142 0.838  10.21
 1.00 Prom -  42630  42591   40                              -6.15

 2.00 Prom +  42647  42686   40                              -6.45
 2.01 Init +  44227  44278   52  0  1   70   58    41 0.013   0.67
 2.02 Intr +  51118  51199   82  2  1   74  103    36 0.079   1.48
 2.03 Intr +  71791  72261  471  1  0   43   54   240 0.171   7.37
 2.04 Intr +  73062  73219  158  0  2  102  110    72 0.821   9.53
 2.05 Intr +  73285  73366   82  2  1   21   99    20 0.588  -5.82
 2.06 Intr +  73559  73633   75  2  0   37   82   112 0.567   3.21
 2.07 Intr +  74499  74734  236  0  2   11   65   211 0.007   7.51
 2.08 Intr +  79394  79455   62  0  2   74   75    36 0.004  -1.57
 2.09 Intr +  93316  93391   76  0  1   41   80   103 0.276   2.97
 2.10 Intr +  97405  97477   73  2  1   86   98    -3 0.558  -1.95
 2.11 Intr + 100003 100077   75  1  0  120  111    79 0.989  11.11
 2.12 Intr + 106516 106629  114  1  0   60   81    98 0.870   4.94
 2.13 Intr + 113212 113329  118  1  1   73   55   105 0.698   5.25
 2.14 Intr + 115792 115822   31  0  1  123   60    48 0.422   2.29
 2.15 Intr + 117387 117573  187  1  1   20   77   323 0.239  22.23
 2.16 Intr + 128658 128689   32  0  2   50  115    19 0.003  -2.34
 2.17 Intr + 130367 130560  194  0  2   84   49    95 0.007   3.49
 2.18 Term + 131852 131905   54  1  0   93   37    57 0.061  -2.32
 2.19 PlyA + 134019 134024    6                               1.05

 3.00 Prom + 140424 140463   40                              -6.05
 3.01 Sngl + 144400 144783  384  0  0   66   42   202 0.967   9.43
 3.02 PlyA + 147017 147022    6                               1.05

 4.03 PlyA - 147118 147113    6                               1.05
 4.02 Term - 148417 148029  389  2  2  -29   49   473 0.952  25.82
 4.01 Init - 148601 148448  154  2  1   25  -17   177 0.755   1.09
 4.00 Prom - 155554 155515   40                              -6.25

 5.00 Prom + 162201 162240   40                              -6.35
 5.01 Init + 167437 167580  144  0  0   39  116   144 0.446  12.47
 5.02 Intr + 172012 172081   70  0  1   66   71    66 0.105   0.54
 5.03 Intr + 177211 177339  129  2  0   50  115    34 0.116   2.05
 5.04 Intr + 179124 179244  121  1  1    4    8   248 0.562   7.03
 5.05 Intr + 182062 182140   79  1  1   40   83    41 0.096  -2.57
 5.06 Term + 188429 188569  141  1  0   85   42   117 0.551   3.75
 5.07 PlyA + 188749 188754    6                               1.05

 6.02 PlyA - 189479 189474    6                               1.05
 6.01 Sngl - 193432 192947  486  1  0   65   48   381 0.801  27.61
 6.00 Prom - 194440 194401   40                              -7.85

 7.05 PlyA - 195075 195070    6                               1.05
 7.04 Term - 196641 196478  164  1  2   51   52    92 0.004  -0.98
 7.03 Intr - 197351 197136  216  0  0   44   94   130 0.005   6.75
 7.02 Intr - 199968 199849  120  1  0   46   44    93 0.002   0.25
 7.01 Init - 204953 204872   82  2  1   84   41    77 0.034   3.78

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  74499  74874  376  0  1   11   37   306 0.821  11.03


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815585f:27548377_27765950|GENSCAN_predicted_peptide_1|646_aa
MGTTSDEMVSVEQTSSSSLNPLCFECGQQHWTRENHLYNYQNEVDDDLVCHICLQPLLQP
LDTPCGHTFCYKCLRNFLQEKDFCPLDRKRLHFKLCKKSSILVHKLLDKLLVLCPFSSVC
KDVMQRCDLEAHLKNRCPGASHRRVALERRKTSRTQAEIENENGPTLLDPAGTLSPEADC
LGTGAVPVERHLTSASLSTWSEEPGLDNPAFEESAGADTTQQPLSLPEGEITTIEIHRSN
PYIQLGISIVGGNETPLINIVIQEVYRDGVIARDGRLLAGDQILQVNNYNISNVSHNYAR
AVLSQPCNTLHLTVLRERRFGNRAHNHSDSNSPREEIFQVALHKRDSGEQLGIKLVRRTD
EPGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQASGERVNLTIAR
PGKPQPGNTIREAGNHSSSSQHHTPPPYYSRPSSHKDLTQCVTCQEKHITVKKEPHESLG
MTVAGGRGSKSGELPIFVTSVPPHGCLARDGRIKRGDVLLNINGIDLTNLSHSEAVAMLK
ASAASPAVALKALEVQIVEEATQNAEEQPSTFSENEYDASWSPSWVMWLGLPSTLHSCHD
IVLRRSYLGSWGFSIVGGYEENHTNQPFFIKTIVLGTPAYYDGRLN

>gi568815585f:27548377_27765950|GENSCAN_predicted_CDS_1|1938_bp
atgggaacaacaagtgatgagatggtgtctgtggaacagacctcctcctcttctctaaac
cccctgtgttttgaatgtggccaacagcactggacaagagaaaaccatttgtacaattac
cagaatgaagtggatgatgacctagtctgccatatttgccttcaacctctgctgcagcca
ctagacacaccctgtggacatacattctgctacaagtgcctcagaaactttttacaagag
aaagatttctgtccgttggaccggaaaagacttcattttaagttgtgcaagaagtctagt
attctagttcataaactcctagacaaattattagttttatgtccattttcttcagtgtgc
aaagatgtaatgcaacgttgtgatctggaggcacatctcaaaaacagatgtcctggagct
tctcatcggagagttgccctggagagaaggaaaactagtagaactcaagcagagattgag
aatgaaaatgggcccactctactagatcctgcaggtaccttatctccagaagcagactgt
ttggggacaggcgcagtgcctgtggagcggcacttgacatcagcgtctctttccacatgg
agtgaggagcctggccttgacaaccctgcctttgaggagagcgctggagctgacaccaca
caacagccacttagtttaccagaaggagaaatcaccacgattgaaattcatcggtccaat
ccttacattcagttaggaatcagcattgtgggtggcaacgaaacacctttgattaacatt
gtcatccaggaggtctatcgggatggggtcattgccagagacgggagacttcttgctgga
gaccagattcttcaggtcaacaactacaatatcagcaatgtgtcccataactatgcccga
gctgtcctttcccagccctgcaacacactgcatcttactgtgcttcgagagaggcgcttt
ggcaaccgagcacacaaccattctgatagtaactctccacgagaagagattttccaagtg
gctcttcataaacgggactctggtgaacagcttggcattaaattggtgcgaaggacagat
gagccaggggtttttattcttgacctgttggaaggggggttggctgcccaggacggcagg
ctaagcagcaatgaccgagtgctggccatcaatgggcacgacctgaagtatggaactccg
gagcttgctgcccagattattcaggccagtggagagagagtgaatttaacaattgctaga
ccagggaaaccccagcctggtaacaccattagagaagcaggaaatcatagcagcagcagc
cagcaccacacaccaccaccgtattatagcagaccaagctcacataaggatcttactcag
tgtgttacatgccaagaaaaacacattactgtaaagaaggaaccacatgaatcccttggc
atgaccgttgctgggggcaggggaagtaagagtggtgagctgcccatctttgtgaccagt
gtgccaccccatggctgccttgcacgagatggcagaataaagagaggtgatgtgttgcta
aatatcaacggcattgatttgaccaatttaagtcacagtgaggcagttgcaatgctgaaa
gccagtgccgcgtcccctgctgttgcccttaaagcacttgaggtccagattgttgaggag
gcgactcagaacgcggaggagcagccgagtactttcagcgaaaatgagtatgatgccagt
tggtccccatcatgggtcatgtggcttgggcttcccagcacacttcatagctgccacgat
atagttttacgaagaagttacttgggaagttggggctttagtatcgttggtggatatgaa
gagaaccacaccaatcagccttttttcattaaaactattgtcttgggaactcctgcttat
tatgatggaagattaaan

>gi568815585f:27548377_27765950|GENSCAN_predicted_peptide_2|723_aa
MVWKAIRLEKITKSVDESSSLQSELTIPVKEIHLRYRQYTYVLTRPTPESTPAPQPGRAK
TAAKDQGSGASCGAAPAASRGAALTHTQLTPAPEAAARSQREGAQRGGQGKVTHWESAAA
RAAHGLLAPLLGTSSRSPRPAEGAESLPGSAPPGIAAAAAAAADFLAKSKLRPRLHFSTA
PAAFPGAAPRPSGPTRTRANRRCVDRLQFKPVVPQKAREGRGPRKGHPGSTPPQLGSRAA
FGLATGKGSDLGAAGLSGPRGKAALAPPPAPPAASGLAWSPRAPDPPAPPEDPETAPAME
EDQELERKISGLKTSMAEGERKTALEMVQAAGTDRHCVTFVLHEEDHTLGNSLRYMIMKN
PEVEFCGYTTTHPSESKINLRIQTREWVSGRKLEDSSELGTFVIVQWAYKKGAVTSIDVE
QTGRSGKAWWRGSLSHTYIFFSLCTRKPEGILKRARKAIEELLKEAKRGKTRAETMGPMG
CANVNLLEKSKLYQNYGNSFDFVDCLMSLEDSQGSRVTWAQMVTLKLIREKPGMVECLMP
VYHVISNTVEDRGRREMAECPNASVPPGEQDHEQKEGDKEPAKSQAQKEENPKKHRSHPY
KHSFRARGSASYSPPRKRSSQDKYEKRSNRRGTSSPTSSIHDNPVCCSCVWKEQAIKWDF
GAESFTAQLAMWTPCTDGVSIVKTSTGGESGEWTSGKGCTAEVMSQHVSDHLAKSLSSDY
ESV

>gi568815585f:27548377_27765950|GENSCAN_predicted_CDS_2|2172_bp
atggtatggaaagccatcagattggaaaagatcactaaaagtgtagatgagtcatcctca
ttgcaatctgaacttacgattcccgtaaaagaaattcatttacgttacagacaatatact
tatgttctaaccagacccacacccgagtccacgccagccccgcagcccgggcgagcgaag
acagccgcgaaggaccaaggctccggggcgagctgtggcgccgctccggccgcctcccgg
ggcgcggcgctgacccacacccagctgacgcccgcacctgaggcggctgcccgcagccag
cgagagggcgcgcagcgaggcgggcagggcaaagttactcactgggaaagcgcggctgcc
cgggccgcgcacgggctcctggcgccgctgctcggcaccagctcccgctctccgcggccc
gctgagggagcggagagcctgcccggctccgctccgccaggaatcgccgccgccgccgcc
gccgccgcggatttcctggcaaaaagcaaactccggccaagacttcacttctcaaccgcc
cctgctgccttcccgggggcagcgccaaggccgagcggcccaacccgcacccgggccaat
cggaggtgtgttgaccgactacagtttaagcctgtcgtcccacaaaaggcccgggagggc
cggggtcccaggaagggccatcctgggtcaacaccgccccagttgggaagtcgggccgct
ttcggacttgccactgggaagggaagtgatttgggggcggcaggcctgtctgggcctcgg
ggtaaggcggcgctggccccgccccctgcccctcccgccgcgagtggcctcgcgtggtcg
cccagagcccccgatccgccagcaccacctgaggatccagaaaccgccccagcgatggaa
gaggatcaggagctggagagaaaaatatctggattgaagacctcaatggctgaaggcgag
aggaagacagccctggaaatggtccaggcagctggaacagatagacactgtgtgacattt
gtattgcacgaggaagaccataccctaggaaattctctacgttacatgatcatgaagaac
ccggaagtggaattttgtggttacactacgacccatccttcagagagcaaaattaattta
cgcattcagactcgagaatgggtgagtggaaggaaactggaagacagcagtgaactgggg
acatttgtaatagtccagtgggcctataagaaaggagcagttacatctattgatgtggag
caaacagggagatcgggaaaggcttggtggagaggcagtctttctcatacatatatcttc
ttttctctttgtactcgtaaaccagaaggcatccttaagcgtgccaggaaagcaatagaa
gaactgcttaaggaggcaaaacgtgggaaaactagagctgaaacaatgggacccatgggt
tgtgcaaatgtcaaccttctggagaaaagcaaattatatcaaaactatggaaatagcttt
gactttgtagattgcctcatgagtctggaggactctcagggttcacgggtcacatgggct
cagatggttaccctaaagctgatacgagaaaagccaggaatggtggagtgtctaatgcca
gtttatcatgtcatctcaaatactgtggaagatcgggggaggcgggaaatggcagaatgt
cctaatgccagcgtgcccccaggagagcaagaccatgaacaaaaagagggcgataaggaa
ccagcgaagagccaggcccagaaagaagaaaacccgaagaaacacagaagccatccttac
aagcacagcttccgcgctcgaggttccgccagttactccccgccacgaaagcggagcagc
caggacaagtacgaaaagcggtccaaccggcgaggaacttccagtcctacaagctctatt
catgacaatccagtttgctgcagttgtgtctggaaagagcaggcaatcaaatgggatttt
ggagctgaatcattcaccgcccagctagcaatgtggacaccttgcacagatggtgtttcc
attgttaaaacttccactggtggtgaatcaggagagtggacttctggaaagggatgcact
gcagaggtgatgagtcagcatgtctctgaccatctggccaaatcattgtccagcgactat
gagtcagtatag

>gi568815585f:27548377_27765950|GENSCAN_predicted_peptide_3|127_aa
MDLLTIAPNSLLLEFLLPIPATLSSAGLELLVAKVVVVGKWENASSRDHMNGSTELEDET
ATRPFWASYATEATCVKGGRGGVTLLVEVIDSNYQTEIGGKEDYVWNPGDSLGCLLSGYT
ILHPPQQ

>gi568815585f:27548377_27765950|GENSCAN_predicted_CDS_3|384_bp
atggatcttctcaccattgcacctaatagtcttctcctggaatttttgcttcctatccca
gcaactttgagctctgctggtttggaactcttagtcgccaaggtggtggtagttgggaag
tgggagaatgcttccagcagggatcacatgaatggttccacagaactagaagatgagact
gctaccaggccattttgggcatcttatgccactgaagcaacatgcgtaaaaggagggagg
ggtggtgttaccctacttgttgaagtgattgattccaattaccaaactgaaattggaggc
aaggaggactatgtgtggaacccaggggactctctggggtgcctcttaagtggctatacc
attttgcatcccccccagcaatga

>gi568815585f:27548377_27765950|GENSCAN_predicted_peptide_4|180_aa
MVSLGGFEITPPVLLRLKCGSGPVHNSGQHVVAVEEDAESEDEKEEVVKLLSGSKISQKK
VAADEEEEEDDDDEDDEETEKKSTSEEIYTRYSSQKSTEVKREWKRLKTINTKIKKTRIL
QKEKKTETPKGSSSVEDIKAKMQASVEKGGSLPKVETTFINYVKNCFWMTDQEAIQDLWQ

>gi568815585f:27548377_27765950|GENSCAN_predicted_CDS_4|543_bp
atggtttcccttgggggctttgaaataacaccacctgtgcttttacgactgaagtgtggt
tcagggccagtgcataatagtggacagcacgtagtagctgtagaggaagatgcagagtca
gaagatgaaaaggaggaggttgtaaaactcttaagtggtagcaagatttcacagaaaaaa
gttgctgctgatgaagaagaagaagaagatgatgatgatgaagatgatgaggaaactgaa
aaaaaaagcacaagtgaagaaatctataccagatactccagccaaaaaagcacagaagtc
aaacgagaatggaaaagactcaaaaccatcaacaccaagataaaaaagacaagaatcctt
caaaaagagaaaaaaactgaaacaccaaaaggatctagttctgtagaagatattaaagca
aaaatgcaagcaagtgtagaaaaaggtggttctcttcccaaagtggaaaccacgttcatc
aattatgtgaagaattgtttctggatgactgaccaggaggctattcaagatctctggcag
tga

>gi568815585f:27548377_27765950|GENSCAN_predicted_peptide_5|227_aa
MHVKGAGSWKEDGGKSQAGHKECEIYCECEKKVCIQEKQGEIGVHRRKAGDSSDHKSCES
QIWKRKSTLREEDTHTTQTGHLRGPMACFQVAESKREAIVRTDHSSSSIVSMSAEFRESD
DDDGDDGKEEEEDDDQGGGEGGAGAGGKAPSMHQCWALCPCSELPDRELSFFQSVCTFGL
EFPEHQQPDPCPPSRRLRNLKAEEDKTKIGTLDVPQDPSRPGKDNKL

>gi568815585f:27548377_27765950|GENSCAN_predicted_CDS_5|684_bp
atgcatgtcaaaggagctgggagttggaaggaagatggaggcaagagtcaagcaggtcac
aaggaatgtgagatatactgtgagtgtgagaagaaagtctgcatccaagagaaacagggt
gaaattggtgtccacaggagaaaggctggggatagctcagaccataagagctgtgaaagt
cagatttggaagaggaagtccacattgcgggaagaggacacacacaccacacagactgga
catctcagagggcccatggcatgttttcaagttgcggagagcaaaagagaggccatagtt
aggactgatcatagttcatcctcaatcgtgtcaatgagtgcagagtttagggaatctgat
gatgatgatggagatgatggtaaggaggaggaggaggacgatgaccaaggaggaggagag
ggaggagcaggagcaggaggaaaagcaccatcaatgcatcaatgctgggctctctgtcct
tgctcagaacttcctgatcgtgaattgtcgttttttcagtcagtatgcacctttggactt
gagttcccagaacaccagcagccagatccttgccccccaagcaggagactaagaaacctt
aaagccgaagaggataaaacaaagatagggacattggatgttcctcaagacccctcaagg
cctgggaaggacaacaagctttaa

>gi568815585f:27548377_27765950|GENSCAN_predicted_peptide_6|161_aa
MAKIHVCLSECYKVPSQINNSNKVFGNTERSRNFDVVIMKMHPKTSEKTVACMKELLKSM
EEDVERSEPDNKGPDGACDSRWHLQERLSGIELHERPGRLLEFLLLIKPILEKEEEEKKP
KHFYRLVEKQKAAAELATRSLDLALVADATTLRQHLRALSD

>gi568815585f:27548377_27765950|GENSCAN_predicted_CDS_6|486_bp
atggctaaaatacatgtctgcctcagtgaatgttacaaagtcccaagtcagatcaacaac
tccaacaaagtatttggtaacacagagagaagcaggaactttgatgttgtcattatgaaa
atgcatccaaagacttcagaaaaaactgtggcatgcatgaaggagctgctgaagtcaatg
gaggaagatgtagaaagaagtgagcctgacaacaaaggcccggatggagcatgtgacagc
aggtggcatttacaggaaaggctgtcggggattgaactgcatgagagaccagggagactg
cttgaattcttgctgttaataaagccaattctggagaaggaggaggaggaaaagaaacca
aaacatttctataggcttgtagaaaaacagaaggctgctgctgagttagcaactagatcc
ctagatctggccttggtggcagatgccaccacactgaggcaacatctacgggccttaagt
gattga

>gi568815585f:27548377_27765950|GENSCAN_predicted_peptide_7|193_aa
MALLWLFAKLAMTQVAEQQKLLGVGGAVPSTTQGLRIAGAQPWDWQAAPPAAPARDPMGE
ASRAPESACKQALVQSHKAVRTPTANQGYRDAICSCMVNGGRYGKLPFKCVIKKENQSRG
NSHWWGCVPGQRSLRSQYPAGQPAAEKLLEFLFAFHLLGRKLTQMVHKGPRRLASSVELH
TSQRACTCLPIPL

>gi568815585f:27548377_27765950|GENSCAN_predicted_CDS_7|582_bp
atggctcttctgtggctgtttgcaaagttggcaatgactcaggtggcagagcagcagaaa
cttctgggagtggggggagcagtcccatcgaccacccaagggctgaggattgcgggtgca
cagccctgggactggcaggcagctccacctgcagccccggcgcgggatccaatgggtgaa
gccagccgggctcctgagtctgcctgcaaacaggccctggtgcaaagccacaaagcagtg
aggaccccaacagcaaatcaaggctaccgtgatgctatatgttcatgcatggttaatgga
ggcagatacgggaaactgccctttaaatgcgttataaagaaggaaaatcaatccaggggg
aacagccattggtggggctgtgtgcctggccagaggtctctgagaagccagtacccagct
gggcagccggcagctgaaaaactgctggaatttttatttgcatttcatttacttggaagg
aaattgacccagatggtccacaaaggccctagaaggctggcaagcagtgtagagctgcac
acttctcagagggcctgcacttgtctgcccatccctctttga