GENSCAN 1.0	Date run:  7-Nov-116	Time: 20:52:07

Sequence gi568815584r:70630383_70909171 : 278789 bp : 44.27% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   5883   5957   75  2  0   78  113     3 0.598   1.51
 1.02 Intr +  11283  12153  871  2  1  117   99   657 0.733  60.61
 1.03 Intr +  22843  23011  169  2  1   37   70    57 0.005  -2.20
 1.04 Intr +  34988  35233  246  2  0   70   82    62 0.016   0.37
 1.05 Intr +  36337  36518  182  1  2   33   30   183 0.322   6.51
 1.06 Intr +  37182  37364  183  1  0  105  110   216 0.998  25.26
 1.07 Term +  40694  40773   80  0  2   99   41   136 0.960   7.93
 1.08 PlyA +  41623  41628    6                               1.05

 2.20 PlyA -  42309  42304    6                               1.05
 2.19 Term -  43366  43305   62  2  2   90   43    64 0.008   0.07
 2.18 Intr -  54169  54098   72  2  0  112   64    31 0.011   2.48
 2.17 Intr -  69269  69230   40  2  1   99   45    35 0.009  -1.90
 2.16 Intr -  78953  78854  100  1  1   93   81   100 0.627   9.91
 2.15 Intr -  88769  88718   52  0  1  120   53     8 0.072  -1.53
 2.14 Intr -  88912  88829   84  2  0   67   97    80 0.226   6.59
 2.13 Intr - 100482 100087  396  1  0   93  -13   205 0.007   5.45
 2.12 Intr - 102960 102157  804  1  0   98  109   667 0.999  61.23
 2.11 Intr - 103416 103375   42  1  0   83   98    76 0.967   6.31
 2.10 Intr - 104116 104004  113  0  2   85   94    94 0.987   9.72
 2.09 Intr - 108016 107863  154  2  1   35  110    56 0.961   1.63
 2.08 Intr - 109782 109660  123  1  0   60   28   133 0.627   5.06
 2.07 Intr - 112209 111969  241  0  1   96   65   483 0.951  43.92
 2.06 Intr - 118622 118447  176  0  2   61   92   164 0.999  13.76
 2.05 Intr - 119699 119551  149  1  2   97  115   140 0.999  17.48
 2.04 Intr - 122266 122118  149  1  2   74   76    71 0.290   3.53
 2.03 Intr - 122649 122556   94  2  1   61  110   -24 0.149  -2.93
 2.02 Intr - 130800 130620  181  1  1   82   94   148 0.648  13.73
 2.01 Init - 136213 136183   31  1  1   61   86    43 0.631   1.36
 2.00 Prom - 136584 136545   40                              -5.56

 3.00 Prom + 144677 144716   40                              -3.66
 3.01 Init + 162682 162834  153  0  0  107   81    44 0.616   5.58
 3.02 Term + 166346 166402   57  1  0  108   48    61 0.744   1.79
 3.03 PlyA + 166681 166686    6                               1.05

 4.03 PlyA - 168413 168408    6                               1.05
 4.02 Term - 170698 170193  506  2  2  102   44   665 0.995  58.11
 4.01 Init - 178789 178384  406  1  1   73   56   879 0.970  77.95
 4.00 Prom - 190195 190156   40                              -3.96

 5.03 PlyA - 190852 190847    6                               1.05
 5.02 Term - 191794 191540  255  1  0   56   44   191 0.591   7.09
 5.01 Init - 200736 200683   54  0  0   54  115   -22 0.092  -1.58
 5.00 Prom - 201320 201281   40                              -4.66

 6.00 Prom + 202666 202705   40                              -1.46
 6.01 Init + 207284 207360   77  1  2   64   42    75 0.193   1.06
 6.02 Intr + 212268 212393  126  0  0   85   93    20 0.250   1.99
 6.03 Term + 218793 218895  103  0  1   33   55   130 0.304   1.95
 6.04 PlyA + 220321 220326    6                               1.05

 7.04 PlyA - 221005 221000    6                               1.05
 7.03 Term - 240501 240369  133  2  1  119   44    70 0.090   3.26
 7.02 Intr - 277533 276992  542  0  2   -5   74   420 0.665  23.00
 7.01 Init - 277999 277547  453  1  0   38   54   207 0.532   6.17

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 100482  99998  485  1  2   93   42   223 0.984  13.11


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584r:70630383_70909171|GENSCAN_predicted_peptide_1|601_aa
GWTTKSKLIPIAYFKESEGTSWSGKTRRASQSGIEWERAGPSLSLILPSFGQAKLLPGQR
PSPPPHSGPRSPRSASPGPASTGPRHPQVAEGGGRERAARSREAGEGPASEAAAAAAGAA
SGSSGENGSAGRQTAAGCHGRHEACEARGRRPRLLNPGRRGGGGGGGQIAARTRRRGGGR
MERKGSAAGAKGNPSPPAAGEGQRPPPPLCVPGGGGGAPARGQVGAAAEPAELIRRAHEF
KSQGAQCYKDKKFREAIGKYHRALLELKGLLPPPGERERDSRPASPAGALKPGRLSEEQS
KTVEAIEIDCYNSLAVCMKTEENIGKERGKECSKEGYGETREASEQKGEDKTGARGKSAI
SLSVCKTGEVRSCISTSTGSDNMQVRKGTEGPKIPPWREREERGGGLVASAYQKDPLVHQ
KIVVLGEQELPSGVSSLLLLLTWLSALQPVKPDSFLTYKIETVIVPTLEYSEDYISNTCK
TMRPASVQGKHSTNIGHDGDDDDEDDDEEMMIASACLLQAELVNYERVKEYCLKVLKKEG
ENFKALYRSGVAFYHLGDYDKALYYLKEARTQQPTDTNVIRYIQLTEMKLSRCSQREKEA
M

>gi568815584r:70630383_70909171|GENSCAN_predicted_CDS_1|1806_bp
ggttggaccacaaagtctaagctaattccaattgcctattttaaagagagtgagggtaca
agctggagtggcaagactaggcgcgcctcgcagagcgggattgaatgggaaagagcgggg
ccgtctttgtcattaatcctcccctccttcgggcaagccaagcttcttccgggtcagcga
ccatccccgccaccccactcggggccacggtccccccgcagcgctagtcccgggcccgcg
agcaccggcccccgccacccgcaggttgcggagggaggagggcgggagcgggcggcgcgg
agccgggaggcgggggaggggccggcgtccgaggcggcggcggcggcggctggagcagcc
tctggcagcagcggggagaatgggagtgcggggcgccagaccgccgcggggtgtcacggc
cgccacgaagcctgcgaggcgcggggccggcgcccgcggcttttaaacccgggaaggcgc
ggcggcggcggcggcggcgggcagatcgcggcgcgcaccaggcgccggggcggcggccga
atggagagaaagggctcggcggccggggccaaggggaacccgagcccgcccgcggccgga
gaggggcagcggccaccgccgccgctgtgcgtcccgggcggcggcggaggagccccagcg
aggggccaggtcggggcggcggccgagccggccgagctcatccgacgagcgcacgagttc
aaaagccaaggggcgcagtgctacaaggacaagaaattccgtgaagccataggcaaatac
caccgggcgttgctggagctgaaggggctgctgccgccccccggggaacgggagcgggac
tcgcgcccggcctccccggctggggccctgaagcccggccgcctctcggaggagcagagc
aagacggtggaagccatcgagatcgactgttacaacagcctggcagtatgcatgaagaca
gaggaaaatatagggaaagagagagggaaagaatgcagcaaagaaggctatggggaaaca
cgggaagcaagtgagcaaaaaggtgaggacaaaacaggggccaggggaaagagtgccatc
tccctaagtgtctgcaagacaggagaggtgagaagctgtataagcaccagcacaggctcc
gacaacatgcaggtgaggaaggggacagaagggcctaagatcccaccatggagagagagg
gaggagaggggaggggggcttgtagcatcagcttatcagaaggaccccctggtgcaccag
aagattgtagtcctgggtgaacaagagctgccctcgggggttagcagcctgttgcttctg
ttgacttggctttctgccctgcagccagtgaaacctgacagcttcctcacctataaaatt
gaaacagtaatagtacccacattggagtattctgaggattatatcagtaatacatgtaaa
acaatgagaccagcatctgtacaaggtaagcactcaacaaatattggccatgatggtgat
gatgatgatgaagatgatgatgaagagatgatgattgcctctgcctgcctgctccaggct
gagctggtaaactatgaacgagtcaaggaatattgcctcaaagtcttgaagaaggaaggg
gagaacttcaaggccctttaccggtctggtgtggccttctaccaccttggggactatgac
aaagcactctactacctgaaagaagcaaggacccaacaaccaacagacaccaacgtgatt
cggtatatccagctgacggagatgaaactcagccgatgctcccagagagaaaaagaagcc
atgtaa

>gi568815584r:70630383_70909171|GENSCAN_predicted_peptide_2|1020_aa
MDINSIVLLRILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGTYAWMAPEVIRA
SMFSKGSDVWSILPTWAVVLTFLLAVEPLKWDRMQTNKETSQDGGGHLFQEQAMEDNSGF
DLGIWLAMLRVPGGHLVEAPQHDHYLDKSHESYGVLLWELLTGEVPFRGIDGLAVAYGVA
MNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTIEESGFFEMPKDSFHCL
QDNWKHEIQEMFDQLRAKEKELRTWEEELTRAALQQKNQEELLRRREQELAEREIDILER
ELNIIIHQLCQEKPRVKKRKGKFRKSRLKLKDGNRISLPSDFQHKFTVQASPTMDKRKSL
INSRSSPPASPTIIPRLRAIQLTPGESSKTWGRSSVVPKEEGEEEEKRAPKKKGRTWGPG
TLGQKELASGDEGLKSLVDGYKQWSSSAPNLVKGPRSSPALPGFTSLMEMALLAASWVVP
IDIEEDEDSEGPGSGESRLQHSPSQSYLCIPFPRGEDGDGPSSDGIHEEPTPVNSATSTP
QLTPTNSLKRGGAHHRRCEVALLGCGAVLAATGLGFDLLEAGKCQLLPLEEPEPPAREEK
KRREGLFQRSSRPRRSTSPPSRKLFKKEEPMLLLGDPSASLTLLSLSSISECNSTRSLLR
SDSDEIVVYEMPVSPVEAPPLSPCTHNPLVNVRVERFKRDPNQSLTPTHVTLTTPSQPSS
HRRTPSDGALKPETLLASRSPSSNGLSPSPGAGMLKTPSPSRDPGEFPRLPDPNVVFPPT
PRRWNTQQDSTLERPKTLEFLPRPRPSANRQRLDPWWFVSPSHARSTSPANSSSTETPSN
LDSCFASSSSTVEERPGLPALLPFQAGPLPPTERTLLDLDAEGQSVPEATGFKVVPCPKQ
YNEVIPEALLMEVESWCWNGEHLQTASRIQPLLNAIVAASFVWGNMRALLSHTREIKDAD
AQEERSLGKACDHSHTCEYKACHKLKSHSQGWQIQVHTSSGNNYSESFLTHKDQGKTLAV

>gi568815584r:70630383_70909171|GENSCAN_predicted_CDS_2|3063_bp
atggacataaacagcatcgtgctgctacgtatattgatcctccagaaggtggagaatgga
gacctgagcaacaagattctgaagatcactgattttggcctggctcgggaatggcaccga
accaccaagatgagtgcggcagggacgtatgcttggatggcacccgaagtcatccgggcc
tccatgttttccaaaggcagtgatgtgtggagcattctgcctacttgggcagtagttctc
acattccttttagctgtagaacccctgaagtgggatagaatgcagacaaacaaagaaaca
agccaggatggaggtgggcatttattccaagagcaagcaatggaggataacagtggcttt
gacctaggaatctggttggcaatgctgagagttcctggaggtcacttggtagaagctccc
cagcatgaccactacctggataagtcacatgaaagctatggggtgctactttgggagttg
ctgactggtgaggtgccctttcgaggcattgatggcttagcagtcgcttatggagtggcc
atgaacaaactcgcccttcctattccttctacgtgcccagaaccttttgccaaactcatg
gaagactgctggaatcctgatccccactcacgaccatctttcacgaatatcctggaccag
ctaaccaccatagaggagtctggtttctttgaaatgcccaaggactccttccactgcctg
caggacaactggaaacacgagattcaggagatgtttgaccaactcagggccaaagaaaag
gaacttcgcacctgggaggaggagctgacgcgggctgcactgcagcagaagaaccaggag
gaactgctgcggcgtcgggagcaggagctggccgagcgggagattgacatcctggaacgg
gagctcaacatcatcatccaccagctgtgccaggagaagccccgggtgaagaaacgcaag
ggcaagttcaggaagagccggctgaagctcaaggatggcaaccgcatcagcctcccttct
gatttccagcacaagttcacggtgcaggcctcccctaccatggataaaaggaagagtctt
atcaacagccgctccagtcctcctgcaagccccaccatcattcctcgccttcgagccatc
cagttgacaccaggtgaaagcagcaaaacctggggcaggagctcagtcgtcccaaaggag
gaaggggaggaggaggagaagagggccccaaagaagaagggacggacgtgggggccaggg
acgcttggtcagaaggagcttgcctcgggagatgaaggcctcaagtccctggtagatgga
tataagcagtggtcgtccagtgcccccaacctggtgaagggcccaaggagtagcccggcc
ctgccagggttcaccagccttatggagatggccttgctggcagccagttgggtggtgccc
atcgacattgaagaggatgaggacagtgaaggcccagggagtggagagagtcgcctacag
cattcacccagccagtcctacctctgtatcccattccctcgtggagaggatggcgatggc
ccctccagtgatggaatccatgaggagcccaccccagtcaactcggccacgagtacccct
cagctgacgccaaccaacagcctcaagcggggcggtgcccaccaccgccgctgcgaggtg
gctctgctcggctgtggggctgttctggcagccacaggcctagggtttgacttgctggaa
gctggcaagtgccagctgcttcccctggaggagcctgagccaccagcccgggaggagaag
aaaagacgggagggtctttttcagaggtccagccgtcctcgtcggagcaccagcccccca
tcccgaaagcttttcaagaaggaggagcccatgctgttgctaggagacccctctgcctcc
ctgacgctgctctccctctcctccatctccgagtgcaactccacacgctccctgctgcgc
tccgacagcgatgaaattgtcgtgtatgagatgccagtcagcccagtcgaggcccctccc
ctgagtccatgtacccacaaccccctggtcaatgtccgagtagagcgcttcaaacgagat
cctaaccaatctctgactcccacccatgtcaccctcaccaccccctcgcagcccagcagt
caccggcggactccttctgatggggcccttaagccagagactctcctagccagcaggagc
ccctccagcaatgggttgagccccagtcctggagcaggaatgttgaaaacccccagtccc
agccgagacccaggtgaattcccccgtctccctgaccccaatgtggtcttccccccaacc
ccaaggcgctggaacactcagcaggactctaccttggagagacccaagactctggagttt
ctgcctcggccgcgtccttctgccaaccggcaacggctggacccttggtggtttgtgtcc
cccagccatgcccgcagcacctccccagccaacagctccagcacagagacgcccagcaac
ctggactcctgctttgctagcagtagcagcactgtagaggagcggcctggacttccagcc
ctgctcccgttccaggcagggccgctgcccccgactgagcggacgctcctggacctggat
gcagaggggcagagtgttccagaggccactggcttcaaggttgtcccctgccctaagcag
tataacgaggtgattccagaagccctgcttatggaagtggagagttggtgctggaatggt
gagcacctgcagactgctagcagaatccaacccttgctcaatgccattgtagcggcgtca
tttgtctggggtaatatgcgagctttgttgtctcacaccagggaaatcaaggacgcagat
gcacaagaagaaaggtccctgggcaaagcctgtgaccacagccacacctgtgagtataag
gcctgccacaagctcaaatcccacagccagggatggcagatccaggttcacacttcctca
gggaataattactcggagtccttcctgacgcacaaagaccaagggaagaccctggcagtt
tga

>gi568815584r:70630383_70909171|GENSCAN_predicted_peptide_3|69_aa
MRSVTGSPQVGNKGSTEVGQNRLGVDPTAPGSGRLQQLLAAGNWLQWRRGPACDLDLITG
SPAAIWTTG

>gi568815584r:70630383_70909171|GENSCAN_predicted_CDS_3|210_bp
atgaggagcgtgacaggcagtccccaagttgggaacaaagggagtactgaggttggacag
aacagactgggagtagacccgacagcaccgggcagtggtcggctccagcagctcctagca
gccggcaactggctacagtggagacgtgggccagcctgtgacttggacctcataactggc
agtccagcagccatctggaccacagggtga

>gi568815584r:70630383_70909171|GENSCAN_predicted_peptide_4|303_aa
MEPSRALLGCLASAAAAAPPGEDGAGAGAEEEEEEEEEAAAAVGPGELGCDAPLPYWTAV
FEYEAAGEDELTLRLGDVVEVLSKDSQVSGDEGWWTGQLNQRVGIFPSNYVTPRSAFSSR
CQPGGEDPSCYPPIQLLEIDFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDED
ISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPD
ILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNSEYEEMGLEGLRAVAVVSHDVSRSGLL
MEP

>gi568815584r:70630383_70909171|GENSCAN_predicted_CDS_4|912_bp
atggagccctccagagcgcttctcggctgcctagcgagcgccgccgctgccgccccgccg
ggggaggatggagcaggggccggggccgaggaggaggaggaggaggaggaggaggcggcg
gcggcggtgggccccggggagctgggctgcgacgcgccgctgccctactggacggccgtg
ttcgagtacgaggcggcgggcgaggacgagctgaccctgcggctgggcgacgtggtggag
gtgctgtccaaggactcgcaggtgtccggcgacgagggctggtggaccgggcagctgaac
cagcgggtgggcatcttccccagcaactacgtgaccccgcgcagcgccttctccagccgc
tgccagcccggcggcgaggaccccagttgctacccgcccattcagttgttagaaattgat
tttgcggagctcaccttggaagagattattggcatcgggggctttgggaaggtctatcgt
gctttctggataggggatgaggttgctgtgaaagcagctcgccacgaccctgatgaggac
atcagccagaccatagagaatgttcgccaagaggccaagctcttcgccatgctgaagcac
cccaacatcattgccctaagaggggtatgtctgaaggagcccaacctctgcttggtcatg
gagtttgctcgtggaggacctttgaatagagtgttatctgggaaaaggattcccccagac
atcctggtgaattgggctgtgcagattgccagagggatgaactacttacatgatgaggca
attgttcccatcatccaccgcgaccttaagtccagcaacagtgagtatgaagagatgggg
ctggaggggctcagagcagttgcagttgtatcccacgacgtcagtaggagtggacttcta
atggaaccttag

>gi568815584r:70630383_70909171|GENSCAN_predicted_peptide_5|102_aa
MTSNSRVTPGETSRRTAQPRVHVGKLSLLCREETTHRLAEARKLCAGRHGPEAASDRSSD
PPAGGLPERGSRAQGPFSALAADLTLPGPLLPLGRERQRRGS

>gi568815584r:70630383_70909171|GENSCAN_predicted_CDS_5|309_bp
atgacttcaaactcacgagtaactccaggtgagaccagcagaagaactgcccagccccgc
gtccacgtggggaaactgtccctcctgtgccgggaagaaacgactcaccgccttgcagag
gcgcggaagctgtgcgcgggacgccacggccccgaagccgcgagtgaccgcagctccgat
cccccggcgggaggcctgcccgagcgtgggagccgagcccagggccctttctccgcactg
gctgcggacctaacccttcctgggcccctcctccccctggggagagaacgtcagcgccga
ggatcctga

>gi568815584r:70630383_70909171|GENSCAN_predicted_peptide_6|101_aa
MYEISNTLRYVKEDRAKRLHTVGFRWCSTGSFHRDDRMHGRKSTLEGKHTVPEASSNSTS
NAYIEVQRNILTCDENRLQTAKGKRKESDEETIAIIFGKIS

>gi568815584r:70630383_70909171|GENSCAN_predicted_CDS_6|306_bp
atgtatgaaatctcaaatacgttacgctacgtgaaagaagacagagccaaaaggttacat
acagtaggattccgttggtgttctacaggctccttccatagagatgacaggatgcatgga
aggaagagcaccctggaaggaaaacacacagttccagaggcctcttcaaacagtaccagt
aatgcatacatagaagtgcaaagaaacattctgacctgtgatgaaaataggctgcagaca
gccaagggcaaacgtaaagaatctgatgaggagaccattgcaattatttttggcaaaata
tcatga

>gi568815584r:70630383_70909171|GENSCAN_predicted_peptide_7|375_aa
MRRPLKPQSARRLPHSPTGGGPRRGRPSRVAAGGNPEKGPRTLPLPSERAGAAGAGCRGL
VARVTSETRKAPKRGVGARSGGGEPHTERVAAPGGRDPVEEEEGATPASPHRLAGKEPPA
PRPHTHHVEGEGQAQQKEPQVEVQRVHEGGLYQPPLSAAHTPCRRICSVCDPIPTRRRRR
RRRRRRRPRPGPSSASVAGACSCPVYPPPELRVSEPALRRSLVLLQEEEEAANEEEETRE
EEAASGGAEDGGEEETGLLRAAAILSPNTRSRGPAPATRGPPAPPLPPPRPPPAASPGPG
RERGPAPGSDREEAAPPPAPPLRSLRPLGRLRWVIVSLCYSTLPLDASSKLGKINIPYLK
LVALELNSEEGNLEG

>gi568815584r:70630383_70909171|GENSCAN_predicted_CDS_7|1128_bp
atgcggcgtcccctaaagccgcagagcgctcggcgcctgccacacagccccacgggcggg
gggccccggcggggacggcctagccgagtggccgcaggagggaaccccgagaaggggcct
aggacgctgccgcttcccagtgagcgggcgggggcggccggcgcgggttgccgtgggctc
gttgctcgtgtcacctccgaaaccaggaaagccccgaagagaggagtgggagcacgcagt
gggggcggggagcctcacaccgagagggtggcggcccccgggggacgagaccccgtggaa
gaggaagagggcgcgaccccagcatctccccaccggctcgcggggaaggagccacccgct
ccccgcccccacactcaccatgtagagggtgaagggcaggcccagcagaaagagccacag
gtagaggtgcagcgcgttcacgaaggtggcctgtaccagcccccgctgagcgcggcccac
accccctgtcggaggatctgcagcgtctgcgaccccatccccacccggcgccgccgccgt
cgccgccgccgccgccgccgtccccgccccggccccagctcggcctcggtcgccggagcc
tgcagctgccccgtctatccacctccggagctccgggtgagcgagccggcgcttcggcgg
tcgctggtgctgctgcaggaggaggaggaggcagcaaacgaggaggaggagacccgagag
gaggaggcggcgagcggcggggcggaggacggcggagaggaggagaccggccttctgaga
gccgccgccatcttgtctcctaacacccggagccgcggcccggcccccgccacccgcggc
ccgccagcgcccccactgccgccgccgcgacccccgccggccgccagccctgggccaggc
agagaaagaggcccggcgccagggagcgaccgagaggaagccgcgccccctccagctcct
cctctccgctccctccgccccctgggccggctacgatgggtaattgtgtccctgtgctac
agcacactccccttggatgcatcctccaaactgggaaaaattaatatcccctaccttaaa
ctggttgccttagaattgaactcagaggaagggaacctagaaggatga