GENSCAN 1.0	Date run:  8-Nov-116	Time: 10:31:51

Sequence gi568815584f:35726517_35970474 : 243958 bp : 38.78% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.09 PlyA -   1722   1717    6                               1.05
 1.08 Term -   1994   1842  153  2  0   83   42    69 0.020  -1.26
 1.07 Intr -   4881   4843   39  0  0  129   54    35 0.031   1.70
 1.06 Intr -  12134  11997  138  2  0   61   45   182 0.615  10.94
 1.05 Intr -  16049  15852  198  2  0   96   57   204 0.920  16.73
 1.04 Intr -  22308  22069  240  0  0   98   92   213 0.999  19.52
 1.03 Intr -  24174  23966  209  1  2   78   95   160 0.613  13.57
 1.02 Intr -  34490  34313  178  2  1   72   69   111 0.634   6.17
 1.01 Init -  36896  36810   87  2  0   42  111    25 0.353   0.89
 1.00 Prom -  37163  37124   40                              -6.45

 2.00 Prom +  37880  37919   40                              -8.55
 2.01 Sngl +  39396  40178  783  2  0   20   42   418 0.918  26.11
 2.02 PlyA +  41185  41190    6                               1.05

 3.07 PlyA -  41271  41266    6                               1.05
 3.06 Term -  44483  44431   53  0  2   67   35    47 0.091  -6.09
 3.05 Intr -  49229  49119  111  0  0  114  116    48 0.598   9.63
 3.04 Intr -  63238  63143   96  2  0  109   60    28 0.088   1.16
 3.03 Intr -  82409  82214  196  2  1  -32   85   381 0.885  23.87
 3.02 Intr -  82566  82526   41  1  2   96   46   -22 0.003  -8.58
 3.01 Init -  93609  93441  169  0  1   97   85   186 0.429  18.95
 3.00 Prom -  94661  94622   40                              -2.45

 4.00 Prom +  95652  95691   40                              -3.75
 4.01 Init +  98552  98599   48  1  0   67   80    19 0.826   0.20
 4.02 Intr +  99585  99846  262  2  1   63   24   254 0.938  12.64
 4.03 Intr +  99948 100142  195  1  0    7   85   272 0.890  17.26
 4.04 Intr + 104894 104984   91  0  1   74   89    97 0.965   6.53
 4.05 Intr + 106462 106589  128  1  2   46   91   156 0.909  11.10
 4.06 Intr + 108328 108402   75  2  0   73   40    89 0.184   1.17
 4.07 Term + 111527 111540   14  0  2  101   41     7 0.054  -5.31
 4.08 PlyA + 111809 111814    6                               1.05

 5.03 PlyA - 112602 112597    6                               1.05
 5.02 Term - 113633 113291  343  1  1   40   47   222 0.131   6.30
 5.01 Init - 116789 116644  146  2  2   68   80   158 0.107  12.64
 5.00 Prom - 120636 120597   40                              -2.95

 6.00 Prom + 126492 126531   40                              -4.25
 6.01 Init + 128330 128386   57  1  0   91   66   -12 0.495  -1.74
 6.02 Intr + 136074 136170   97  2  1  105  110    69 0.952   9.46
 6.03 Intr + 138431 138483   53  0  2   42   86    39 0.311  -3.19
 6.04 Intr + 141350 141516  167  1  2  105   93    69 0.790   6.94
 6.05 Intr + 155059 155249  191  1  2   91   80   144 0.169  12.21
 6.06 Term + 171379 171461   83  2  2   70   53   110 0.007   2.58
 6.07 PlyA + 172649 172654    6                              -3.44

 7.06 PlyA - 172702 172697    6                               1.05
 7.05 Term - 173585 173451  135  2  0   77   47   167 0.269   8.54
 7.04 Intr - 177155 177111   45  2  0   67   87    77 0.022   3.19
 7.03 Intr - 195899 195805   95  0  2   72   90    77 0.424   5.06
 7.02 Intr - 197140 196780  361  1  1   -6   29   278 0.114   6.37
 7.01 Init - 199866 199669  198  0  0   36   87   158 0.739   9.45
 7.00 Prom - 205491 205452   40                              -4.95

 8.00 Prom + 218865 218904   40                              -5.85
 8.01 Sngl + 221561 223366 1806  1  0   66   44   550 0.715  42.49
 8.02 PlyA + 224067 224072    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 143844 143961  118  0  1  124   37    59 0.969   1.43
S.002 Init - 230184 230093   92  0  2   30   50   123 0.827   2.71


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584f:35726517_35970474|GENSCAN_predicted_peptide_1|413_aa
MVSSGEERNNMIWASVIPVQLSKTLEIMQIRREGVRLFLLWLQALQNNCSKEQLWMFSCL
IPGFSAPQSEHGPRTLDNLINPPLNLQENIPQMRPKPHYVVIKKDAETNEAIYCTKEPFI
KARVIVIRWLVSFWLEPKPHTGPHIPGMEGEVLPKNIQRAAASLVSREESKNDNADKTDR
TTEPEQSHSNTSTLTEREPSSSSLCSIDEEHLTDIEIVRRVFSSKRSNVNFVTEIFRQAF
LLPICEAAAMRKVVKVYQEWIQQEEKPLFMQEPEEIVITSSDLPCIENVTDHDISMEEGE
KREEENGTNTADHVRNSSWAKNGSYQGALHNASEEATEQNIRAGTQAVLQVNQGFIPGLD
PLLVFIINSSNIFLLEPANEIKNLLDEHTDMCKRILNIYRYMVVQVSMDKKTW

>gi568815584f:35726517_35970474|GENSCAN_predicted_CDS_1|1242_bp
atggtttcctctggggaagaaaggaacaatatgatttgggcctcagtgatacctgtacag
ttaagtaaaacattggagataatgcagattaggcgggaaggtgttcgtcttttcttacta
tggttgcaagctcttcagaataactgtagcaaagaacagctctggatgttttcatgctta
atccctggattttcagcaccacagtctgaacatggacctcgaactttagataatctcatt
aatcctccactcaaccttcaagaaaacatcccgcagatgagaccaaagccacattatgtc
gtgataaagaaagatgctgaaaccaatgaagcaatctattgtacaaaggagcctttcatt
aaggctcgtgttattgtcattcgttggctggtttctttctggctggagccaaaaccacat
acaggacctcatattcctgggatggaaggtgaagtcttgccaaagaatattcagagagca
gctgctagtttagtatccagagaagaaagcaaaaatgataatgctgataaaacagacaga
actacagaacccgaacagtctcattccaatacaagcactctcacggagcgagaacctagc
tcatctagtctctgtagtattgatgaagaacatctcacagacattgaaatagttcgcaga
gttttttcttctaaaaggagtaatgtaaactttgtgacagagatatttcgtcaggcattt
ttattaccaatttgtgaagcagcagctatgagaaaagtggtaaaagtatatcaagaatgg
atccaacaagaggaaaaacctttgttcatgcaagagcctgaagaaattgtgatcacttct
tcagacctcccttgcattgaaaatgtcacagaccatgatatttcaatggaagaaggagaa
aaaagagaagaggaaaatgggaccaatactgctgatcatgttcgaaattccagttgggca
aaaaacggctcctaccaaggtgctcttcataacgcctctgaagaagccacagaacaaaac
atacgagctggtacccaggcagttttgcaggtaaatcagggatttattcctggtttggat
ccattgctcgtgtttattataaactcatcaaatatatttcttcttgaacctgcaaatgaa
ataaaaaatcttctggatgaacacacagatatgtgtaaacgcattcttaacatttatcgg
tacatggttgtacaagtatcaatggacaaaaagacttggtaa

>gi568815584f:35726517_35970474|GENSCAN_predicted_peptide_2|260_aa
MRSGNAEGVFGPVKNPWSYSKQYREKRKQNLHFENEDSDWLITGGSSGGSAVAISAFTCY
AALGSDTGGLTRNPAAYCGLVGFKPNYGLVSHHGLISLEDLMEVQGILTRCVDDAAIVLG
VLAEHDPTDSTTAQDPVKPFMIPSLTNVSKLCIGIPEEYLVLELSSEVQSLWSKAADLFE
SEGAKAIEVSFSHITYSIVCYHLLCTSEAASSIARSDGLQYGHRCDTDVSTEAMYAATRR
EGFNDFVRGRILSGNVFLLK

>gi568815584f:35726517_35970474|GENSCAN_predicted_CDS_2|783_bp
atgagatctggaaatgcagaaggcgtatttggaccagttaaaaacccctggagttattca
aaacaatatagagaaaagaggaagcagaatctccactttgagaatgaagattcagactgg
ctgataactggaggaagctcaggtgggagtgcagttgccatatcggcattcacatgctat
gcggctttaggatcagatactggagggctgaccagaaatcctgctgcctactgtgggctt
gttggtttcaaaccaaactatggcttagtttcccatcatggtctcatttccctggaggat
ttgatggaagtgcaaggaatcttaaccagatgtgtggatgatgcagcaattgtcttgggt
gtactggctgaacatgaccctacggattctaccacagcacaggatcctgttaaaccattc
atgattcccagtttgacaaatgtgagcaaactatgtataggtattccagaggaatatctt
gtactggaattatcaagtgaagtacagtctctttggtccaaagctgctgacctctttgag
tctgagggggccaaagcaattgaagtatccttttctcacattacttattcaattgtctgc
taccatctattgtgcacatcagaagcagcatcgagtatagcaagatctgatgggctacaa
tatggtcacagatgtgacactgatgtatctactgaagccatgtatgctgcaaccagacga
gaagggttcaatgattttgtaagaggaagaattctctcaggaaatgttttcttgttaaaa
taa

>gi568815584f:35726517_35970474|GENSCAN_predicted_peptide_3|221_aa
MAVFIRLKLAHNHADDAAMRRELMVLRGDAVLDFLEPKARQLLHNGSFPLELLSFPRPGE
GSAILELGPKSPPRPLPPLSAAGTRLGAGCGSGSGSGSDRMFSKKPHGDVKKSTQKVLDT
KKDALTRLKHLRIVIDLFSSNSLYQWSPNFLTPGTSFVEDSFSTDSGENAESIDLKQFFD
QHFSHIYYVFFENFVTIEASLKQKENFTTSSRKNSSAMAVS

>gi568815584f:35726517_35970474|GENSCAN_predicted_CDS_3|666_bp
atggcggtcttcatccgccttaagctggcccacaaccatgctgatgatgcagctatgcgg
cgtgagctgatggtcctgcgcggtgatgctgtgctggattttctggaaccgaaggctaga
caacttctccacaatggcagctttcccctggaactgttgtccttcccacggccgggagag
ggatccgccatattggagctggggccgaagtctcctccccgtccactccctccactttct
gccgccgggacccggctgggagccggctgtggcagtggcagtggcagtggcagcgacagg
atgttctccaagaagccgcacggggacgtgaagaagtccacccagaaggtgctagacacc
aagaaggacgcactgactcgcctcaagcacctgcgcatcgtcatcgatctcttttcttct
aactctttatatcagtggtccccaaactttttgacaccagggaccagtttcgtagaagac
agtttttctacagacagtggggagaatgcagaatctattgatcttaaacagtttttcgac
caacatttttcacatatatactatgtgttctttgaaaattttgtgactattgaagctagt
cttaaacagaaagaaaattttacaacttcttccagaaagaattcatcagcgatggcagtt
tcatag

>gi568815584f:35726517_35970474|GENSCAN_predicted_peptide_4|270_aa
MAAGQRRSSLSRLGSQFINCDPECQLSCLVGLEVQKEEVIRAAEGWKRAAPAGLRPTNYN
SRQASEGRVVIAGNQSYQSRASPRPLARWKASANGRAPIAEPAAAVAGLGAGSGKRRRGW
KMPVHSRGDKKETNHHDEMEVDYAENEGSSSEDEDTESSSVSEDGDSSEMDDEDCERRRM
ECLDEMSNLEKQFTDLKDQLYKERLSQVDAKLQEVIAGKAPEYLEPLATLQENMQIRTKV
AGIYRELCLESVKNKYECEIQASRQHCLGV

>gi568815584f:35726517_35970474|GENSCAN_predicted_CDS_4|813_bp
atggcggccgggcagagacgctcctcactttccagactgggcagccagtttataaactgc
gatccagagtgtcagctttcgtgccttgtgggacttgaagtccagaaggaagaagtgatc
agggctgccgagggatggaagcgtgcagcccctgcaggtctgagacctacgaactacaac
tcccggcaagcatcggaaggccgcgtcgtaattgcgggcaaccaatcgtaccagagcagg
gcaagcccccgccctctggctcggtggaaggcctccgccaatggcagagctcccatcgca
gagcctgcggcggcggtggccgggctgggcgccggtagtggaaagcgacggcgcggctgg
aaaatgccagtccattcccgaggggataagaaggagaccaaccatcacgatgagatggag
gtggactacgccgaaaatgaggggagcagctccgaggacgaggacactgagagctcgtcg
gtctccgaggatggagatagctcagaaatggatgatgaagactgtgaaagaagaagaatg
gaatgtttggatgaaatgtccaatcttgaaaaacagtttaccgatctcaaagatcaactt
tataaagaacgattaagtcaggtggatgcaaaactacaagaagtcatagctggaaaagca
ccagaatacttggaaccgctggcaactttacaggaaaatatgcaaattcgtacaaaggta
gcaggaatctatagagagctctgcttagaatctgtaaagaacaaatatgaatgtgaaatt
caagcttctcgccagcattgcctcggtgtgtga

>gi568815584f:35726517_35970474|GENSCAN_predicted_peptide_5|162_aa
MRKNQCKKAENSKNQNASSPPKDHNSSPAREQNWTENELDELAEVGFSRTNDKNHMIISI
DAENVFDKIQHHFMLKTLNELGIDGMYLKIIRAIYDKPTANIILNGQKLEAIPLKTGTRQ
GCPLSPLVFDIVLEVLARAIRQEKEIKGIQIGRGEVKLSVCR

>gi568815584f:35726517_35970474|GENSCAN_predicted_CDS_5|489_bp
atgaggaaaaaccagtgcaaaaaggctgaaaattccaaaaaccagaacgcctcttctcct
ccaaaggatcacaactcctcaccagcaagggaacaaaactggacagagaatgagcttgac
gaattggcagaagtaggcttcagtaggaccaatgacaaaaaccacatgattatctcaata
gatgcagaaaatgtcttcgataaaattcaacaccacttcatgctaaaaactctcaatgaa
ctaggtattgatggaatgtatctcaaaataataagagctatttatgacaaacccacagca
aatatcatactgaatgggcaaaagctggaagcaatccctttgaaaaccggcacaagacaa
ggatgtcctctctcaccactcgtattcgacatagtattggaagttctggccagggcaatc
cggcaagagaaagaaataaagggtattcaaataggaagaggggaagtcaaattgtctgtt
tgcagatga

>gi568815584f:35726517_35970474|GENSCAN_predicted_peptide_6|215_aa
MVCHQPMTNFVLGISWKVQSEKLLLYDTVQSELEEKIRRLEEDRHSIDITSVYMLQDLDI
LEDWTTIRKCFINITVFELIPLAPVKLEKHLHSARSEEGRLYYDGEWYIRGQTICIDKKD
ECPTSYDQSSYSQQNTCGKPSSYGQQSSYGQQSSYRKHPPTSYLPQTGSCSQASTLEETS
ASSFERLMTPGGSSSGYSCSSVTKGREGPAVYGQA

>gi568815584f:35726517_35970474|GENSCAN_predicted_CDS_6|648_bp
atggtgtgccaccagccaatgactaattttgtgcttgggatttcttggaaggtgcagagc
gaaaagctgttgctatatgatacagtccagagtgaactagaggagaagataagaaggctt
gaagaggataggcacagcattgatattacctcagtttatatgctacaagatcttgatatt
cttgaagactggacaacaattaggaagtgttttattaatataacagtttttgaactgatc
cctttagcacctgtgaaactggaaaaacatctgcacagtgctagatctgaagagggaaga
ctatattatgatggtgaatggtatatacgtggacaaacaatatgtattgataaaaaagat
gaatgtcctacaagctatgatcagagcagttactctcagcagaacacctgtgggaaaccg
agcagttatggacagcagagtagctatggtcaacaaagcagctatagaaagcaccctccc
actagttacctaccccaaactggatcctgcagccaggcttctacactggaggagacttct
gcatcaagttttgaacgactgatgactcctggtggcagcagcagtggctacagctgcagc
agtgtgacaaaggggagagaaggtcctgctgtctatgggcaagcctga

>gi568815584f:35726517_35970474|GENSCAN_predicted_peptide_7|277_aa
MREALADLSELDKNKNKVQKEIKEQKDGPKWVPAHLPQPRQAVNVKQYHLPGGHSEVTQT
TQQLNKAPQTLRFTADTLRHGPEADSRAVLLRTRMDLPSSDGYLDMKLSWKAPPYWVSFT
APESAMKTAGGEVVPAVLLDGGPRALDINTQQHRYLLEQSQCGKHGQGQKLINWLLCLLL
GKEAICAFALQQAESFYGGKDGTVQLRTYTVLVAHDFRACMSVCVTQQPASGKLKNLGHL
THRVSRILDFANRIFFVQPKKFICPLNFRKLAAGSRD

>gi568815584f:35726517_35970474|GENSCAN_predicted_CDS_7|834_bp
atgagggaagcattggcagacctcagtgagctggataagaacaagaacaaagtccagaaa
gaaattaaggagcaaaaagatgggccaaaatgggtgcctgcacacctgccccagcccagg
caggcagtgaacgtgaagcaataccacctgccaggaggacactctgaagtcacccaaaca
actcagcaattaaataaggccccacaaactctcaggtttaccgctgacacactgagacat
ggtcctgaagcagacagccgggctgtgctcctgagaacacgcatggatctgccaagcagt
gatggctacctggacatgaagttgagctggaaagcgcccccatattgggtcagttttaca
gcaccagagagtgccatgaagactgcgggaggggaggtggtcccagctgtgctccttgat
ggaggtccaagagccttagacatcaacacacagcagcaccgatacctgctggagcaatca
cagtgtgggaagcatgggcaaggccagaaacttatcaattggctattatgcctgctcctg
ggaaaggaagccatatgtgcctttgctcttcagcaagcagagtctttttatggtgggaaa
gatggcactgtgcagctccggacttacacagtgcttgtggcacatgacttccgggcctgc
atgagtgtctgcgtgacacagcagccagcttccggcaaattaaagaacctgggccatttg
acccatagagtgtcccgcattctggattttgctaatcgcatattcttcgtgcaacccaag
aagttcatctgtcctctgaatttccgaaaattggcagctggatccagagactga

>gi568815584f:35726517_35970474|GENSCAN_predicted_peptide_8|601_aa
MESNHRPEDTESNHRPEDTEGNHRPEDTEGNHRPEDMERNHRPEDTEGNHRPEDTEGNHR
PEDTERNHRPEDMESNHRLEDMQSNHRPEDMEGNHRLEDMERNHRPEDTEGNHRPEDTEG
NHRPEDTEGNHRPEDTERNHRPEDMERNHRPEDMEGNHRPEDMERNHRPEDTERNHRPED
MERNHRLEDMERNHRPEDTESNHRLEDMESNHRLEDMESNHRPEDMERNHRPEDMERNHR
PEDMEGNHRLEDMERNHRPEDTESNHRLEDMESNHRLEDMESNHRLEDMESNHRLEDMER
NHRLEDMERNHRLEDMESNHRLEDMERNHRLEDMERNHRLEDMESNHRPEDTEGNHRLED
MESNHRLEDMERNHRLEDMESNHRPEDMESNHRLEDMQSNHRLEDMERNHRLEDMESNHR
LEDMERNHRLEDMESNHRLEDMERNHRLEDMERNHRLGEMERNHRLGDMESNHRLEDMER
NHRLEDMERNHRLGEMERNHRLGDMESNHRLEDMERNHRLEDMERNHRLGEMERNHRLGD
MESNHRLEDMERNHRLEDMERNHKWERWREITGWGIWRVITGWERWTFLLRATVKTVLKD
K

>gi568815584f:35726517_35970474|GENSCAN_predicted_CDS_8|1806_bp
atggagagtaatcacaggccagaggacacggagagtaatcacaggccggaggacacggag
ggtaatcacaggccggaggacacggagggtaatcacaggccggaggacatggagagaaat
cacaggccggaggacacggagggtaatcacaggccggaggacacggagggtaatcacagg
ccggaggacacggagagaaatcacaggccggaggatatggagagtaatcacaggctggag
gatatgcagagtaatcacaggccagaggatatggagggtaatcacaggctggaggatatg
gagagaaatcacaggccggaggacacggagggtaatcacaggccggaggacacggagggt
aatcacaggccggaggacacggagggtaatcacaggccggaggacacggagagaaatcac
aggccggaggatatggagagaaatcacaggccggaggatatggagggtaatcacaggccg
gaggatatggagagaaatcacaggccggaggacacggagagaaatcacaggccggaggat
atggagagaaatcacaggctggaggatatggagagaaatcacaggccggaggacacggag
agtaatcacaggctggaggatatggagagtaatcacaggctggaggatatggagagtaat
cacaggccggaggatatggagagaaatcacaggccggaggacatggagagaaatcacagg
ccggaggatatggagggtaatcacaggctggaggatatggagagaaatcacaggccggag
gacacggagagtaatcacaggctggaggatatggagagtaatcacaggctggaggatatg
gagagtaatcacaggctggaggatatggagagtaatcacaggctggaggatatggagaga
aatcacaggctggaggatatggagagaaatcacaggctggaggatatggagagtaatcac
aggctggaggatatggagagaaatcacaggctggaggatatggagagaaatcacaggctg
gaggatatggagagtaatcacaggccggaggacacggagggtaatcacaggctggaggat
atggagagtaatcacaggctggaggatatggagagaaatcacaggctggaggatatggag
agtaatcacaggccggaggatatggagagtaatcacaggctggaggatatgcagagtaat
cacaggctggaggatatggagagaaatcacaggctggaggatatggagagtaatcacagg
ctggaggatatggagagaaatcacaggctggaggatatggagagtaatcacaggctggag
gatatggagagaaatcacaggctggaggatatggagagaaatcacaggctgggagagatg
gagagaaatcacaggctgggggatatggagagtaatcacaggctggaggatatggagaga
aatcacaggctggaggatatggagagaaatcacaggctgggagagatggagagaaatcac
aggctgggggatatggagagtaatcacaggctggaggatatggagagaaatcacaggctg
gaggatatggagagaaatcacaggctgggagagatggagagaaatcacaggctgggggat
atggagagtaatcacaggctggaggatatggagagaaatcacaggctggaggatatggag
agaaatcacaagtgggagagatggagagaaatcacaggctgggggatatggagagtaatc
acaggctgggagagatggacatttttattaagagcaactgtgaaaacagttctgaaagat
aagtag