GENSCAN 1.0	Date run:  8-Nov-116	Time: 15:29:37

Sequence gi568815583r:78822133_79044981 : 222849 bp : 47.69% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   8130   8223   94  2  1   79   81    27 0.299   0.64
 1.02 Intr +   8893   9061  169  2  1   76   12   140 0.419   4.20
 1.03 Intr +   9073   9612  540  1  0   62   50   717 0.293  57.32
 1.04 Intr +   9884  10013  130  2  1   76   55   113 0.262   7.50
 1.05 Intr +  18420  18543  124  2  1   45   98    62 0.036   3.06
 1.06 Term +  40542  40795  254  1  2   53   38   134 0.082   0.70
 1.07 PlyA +  40814  40819    6                               1.05

 2.00 Prom +  45636  45675   40                              -4.36
 2.01 Init +  51275  51597  323  1  2   51   52   249 0.803  12.41
 2.02 Intr +  64009  64095   87  1  0  101   89   107 0.995  11.19
 2.03 Intr +  68857  68882   26  1  2  130   69    25 0.800   2.47
 2.04 Intr +  69352  69440   89  2  2   54   82    61 0.991   1.79
 2.05 Intr +  70080  70181  102  2  0   88   93    60 0.982   6.87
 2.06 Intr +  71407  71495   89  0  2   65   60    76 0.903   1.27
 2.07 Term +  74851  74935   85  1  1   84   54   102 0.822   3.53
 2.08 PlyA +  75078  75083    6                               1.05

 3.15 PlyA -  75192  75187    6                               1.05
 3.14 Term -  95977  95843  135  1  0   59   42   128 0.710   3.32
 3.13 Intr - 100073 100004   70  1  1   76   50    83 0.709   2.48
 3.12 Intr - 100986 100861  126  2  0   92  102    28 0.951   4.39
 3.11 Intr - 103308 103202  107  0  2   87  109   163 0.989  17.31
 3.10 Intr - 105649 105581   69  1  0   84   78   139 0.935  11.88
 3.09 Intr - 107361 107280   82  2  1  101   88   122 0.997  13.14
 3.08 Intr - 109374 109253  122  0  2   92   28   163 0.851   9.99
 3.07 Intr - 109846 109737  110  2  2   35   75    77 0.705   1.10
 3.06 Intr - 110326 110240   87  2  0  114   91   116 0.723  14.44
 3.05 Intr - 112950 112767  184  0  1   60   31   115 0.321   2.36
 3.04 Intr - 113618 113548   71  0  2   78   96    40 0.949   2.70
 3.03 Intr - 115291 115186  106  1  1   93   68   149 0.908  13.19
 3.02 Intr - 118970 118939   32  0  2  120   48    38 0.329   0.85
 3.01 Init - 122849 122759   91  2  1   64   73   200 0.495  14.75
 3.00 Prom - 133906 133867   40                              -0.96

 4.24 PlyA - 134973 134968    6                               1.05
 4.23 Term - 140104 140012   93  1  0  125   48    50 0.361   2.53
 4.22 Intr - 149802 149734   69  0  0  105  121    74 0.999  11.78
 4.21 Intr - 151288 151171  118  0  1   39   74   213 0.553  15.47
 4.20 Intr - 158567 158488   80  2  2   94  106    41 0.966   4.85
 4.19 Intr - 163072 162875  198  1  0   32   80   328 0.973  25.95
 4.18 Intr - 168141 168057   85  2  1  111   86    76 0.989   9.52
 4.17 Intr - 169752 169559  194  0  2   18   80   176 0.315   8.09
 4.16 Intr - 173668 173608   61  0  1   91   89    92 0.912   8.34
 4.15 Intr - 176076 175964  113  0  2   62  103   248 0.995  22.88
 4.14 Intr - 176693 176587  107  0  2   51   94   102 0.576   7.03
 4.13 Intr - 177781 177611  171  2  0  100   91   188 0.999  20.21
 4.12 Intr - 179655 179530  126  1  0   80   87   114 0.985  11.15
 4.11 Intr - 182043 181670  374  2  2  133   70   714 0.999  68.81
 4.10 Intr - 184302 184054  249  2  0  141   39   649 0.844  61.85
 4.09 Intr - 193277 193195   83  2  2   74  108   136 0.922  12.64
 4.08 Intr - 194468 194368  101  0  2   77   81    63 0.783   4.33
 4.07 Intr - 197972 197909   64  2  1   86  113    52 0.942   5.79
 4.06 Intr - 203342 203182  161  0  2  103  116    56 0.977   9.61
 4.05 Intr - 205727 205609  119  1  2  117   86   292 0.967  32.01
 4.04 Intr - 209377 209268  110  1  2  118   94   186 0.999  21.28
 4.03 Intr - 210184 209991  194  2  2  105   43   481 0.749  44.51
 4.02 Intr - 213078 212999   80  2  2   99   92    84 0.763   9.09
 4.01 Init - 218452 218391   62  1  2   58   95    21 0.336   0.52

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815583r:78822133_79044981|GENSCAN_predicted_peptide_1|436_aa
ISCFSVFSPVVSSAADLGKKIRDTCRADHSEAGRKRRRGLLPNSSLGNGSENTSPARSPR
SLHGLDGVAGAVRAPALRALIAGAYWALPGGQRLVLVRVRSQQWRRHWLLNCFLLNLAAT
DLQFVLTLPFWAVDTARDFSWPFGGAICKVMLTLTVLNMYASIFLLSAMSVARYCIVTGA
LPPSHRGASRASCVCCLLWAMAVLATAPTALFATAARVGGKHSCLLRFPAGGPKWQVLYH
LQKIAVAFVLPLATLGTCSLLLRFLRLWAFESCVAEPSGRCPSEQAPTAAPQRLHSSNEG
RLSLRQYQGHGQKRMIPFPHPQVTDALGRYSNYILSSTVESPSLRSMNFEKQGGNLEKDT
QTQTPTSGNLGESHVQTKAETGVMLLQAKEHQMLLQAKERQRLPANHQKLGERNGTDSSS
QSTEGTKPTNTFIWDV

>gi568815583r:78822133_79044981|GENSCAN_predicted_CDS_1|1311_bp
attagttgcttctccgtcttcagcccagttgtaagcagtgcggctgaccttgggaagaag
atcagggatacttgcagagcagaccacagtgaagctggccggaagaggcgtcgggggctg
ctccctaacagctccctgggcaacggatcagagaacactagcccggcccggagtccccgc
agcctgcatggcctggacggggtggcgggggccgtccgggcgccggcgctgcgggctctg
attgcgggcgcctactgggccctgcctggtgggcaacggctggtgctagtccgggtgagg
tcccagcagtggcgccgccactggctgctcaattgcttcctcctcaatctggcagccact
gacctgcagtttgtgctaacgctgcccttttgggccgtggacacggcgcgcgactttagc
tggcccttcgggggtgccatctgcaaggtgatgctgacgctcaccgtgctcaacatgtat
gccagcatcttcctcctcagtgccatgagcgtggcacgctattgcattgtgactggcgcg
ctgcctccgagccatcggggcgcatcacgggccagctgtgtgtgctgcctgctctgggct
atggccgtcctggctacggcgcccaccgccctgttcgccacggcagctagggtgggggga
aagcactcgtgcctgctgcgcttccccgccggcggccccaaatggcaggtgctctaccac
ctgcagaagatcgcagtagccttcgtgctgccgctggccacgctgggcacctgttcgctg
ctgctgcgcttcctgcgactgtgggccttcgagagctgtgtagctgagcccagcggccgg
tgcccctccgagcaagctcccacggcagcgccccagcggctgcactcttccaatgagggc
cgcttgtcgctgcgtcagtatcaagggcatgggcaaaaaagaatgatccccttcccccat
cctcaagtgactgatgctcttggaagatactccaactatatcctgagtagcactgtggag
agccccagtctgagaagcatgaactttgagaagcaagggggaaatttggaaaaagacaca
caaacccagacaccaacatctggaaacctgggagaaagccatgtgcagacgaaggcagaa
actggggtaatgcttctacaagctaaggaacaccaaatgctcctgcaagctaaggaacgc
caaagattgccagcaaaccaccagaagctaggggagaggaatggcacagattcttcctca
cagtccacagaaggaaccaaacctaccaacacctttatatgggatgtctag

>gi568815583r:78822133_79044981|GENSCAN_predicted_peptide_2|266_aa
MWRRGGRGGGCFGRSCGAPGRLGSYDGFFGASWSPGVVAFGGNSAADGGGFGATGREKCV
VKWPLQDGGAIMAAGVSVPYGGTAYGQMQRPLPRRPEGCRGPPHTTECWDEWVPESRVLK
YVDTNLQKQRELQKANQKTKKNKQKTPGNGDGGSTSETPQPPRKKRARVDPTVENEETFM
NRVEVKVKIPEELKPWLVDDWDLITRQKQLFYLPAKKNVDSILEDYANYKKSRGNTDNKY
LAKNSATLFSASDYEVAPPEYHRKAV

>gi568815583r:78822133_79044981|GENSCAN_predicted_CDS_2|801_bp
atgtggcggcggggggggaggggcggtggctgtttcgggcggtcctgcggcgcgcccggc
cgcttgggcagctacgacgggtttttcggtgcttcctggagccccggggtggttgcgttc
ggtggcaactcagctgcggatgggggtgggtttggcgccacggggcgggagaagtgcgtt
gtaaaatggccgttgcaagatggcggcgccatcatggccgccggcgtctcggtcccgtat
ggaggcacagcttacgggcagatgcagcgcccccttccacgacgaccagaaggttgccgg
ggccctccgcataccacagagtgttgggatgaatgggttccggagagcagagtactcaaa
tacgtggacaccaatttgcagaaacagcgagaacttcaaaaagccaatcagaaaacgaaa
aagaacaaacagaaaacacctggaaatggagatggtggcagtaccagtgagacccctcag
cctcctcggaagaaaagggcccgggtagatcctactgttgaaaatgaggaaacattcatg
aacagagttgaagttaaagtaaagattcctgaagagctaaaaccgtggcttgttgatgac
tgggacttaattaccaggcaaaaacagctcttttatcttcctgccaagaagaatgtggat
tccattcttgaggattatgcaaattacaagaaatctcgtggaaacacagataataagtac
ctggcaaagaattctgcaactttgttcagtgccagcgattatgaagtggctcctcctgag
taccatcggaaagctgtgtga

>gi568815583r:78822133_79044981|GENSCAN_predicted_peptide_3|463_aa
MWATLPLLCAGAWLLGVPVCGAAELCVNSLEKNVKVIKHKNHRKTYSTEEYHHRLQTFAS
NWRKINAHNNGNHTFKMALNQFSDMSFAEIKHKYLWSEPQNCSATKSNYLRGTGPYPPSV
DWRKKGNFVSPVKNQVCLAISILSLQNGHTPRQYTRKNNSKGCLRQLLDFLHHWGPGVCD
RHRNRKDAVLETDDAPEGTILAPASVEKGGTVHSRPGDAMRTLGCGQAEQQLVDCAQDFN
NHGCQGYVSDQKGPKTSSFPTDRFDRIQGLPSQAFEYILYNKGIMGEDTYPYQGKDGYCK
FQPGKAIGFVKDVANITIYDEEAMVEAVALYNPVSFAFEVTQDFMMYRTGIYSSTSCHKT
PDKVNHAVLAVGYGEKNGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASYPIPLA
PGSTQDVYNIQCWQDCCETSSMACALVLFGFKEIGRHGYIQLR

>gi568815583r:78822133_79044981|GENSCAN_predicted_CDS_3|1392_bp
atgtgggccacgctgccgctgctctgcgccggggcctggctcctgggagtccccgtctgc
ggtgccgccgaactgtgcgtgaactccttagaaaagaatgtgaaggtgatcaagcataaa
aatcaccgtaagacctacagtacggaggagtaccaccacaggctgcagacgtttgccagc
aactggaggaagataaacgcccacaacaatgggaaccacacatttaaaatggcactgaac
caattttcagacatgagctttgctgaaataaaacacaagtatctctggtcagagcctcag
aattgctcagccaccaaaagtaactaccttcgaggtactggtccctacccaccttccgtg
gactggcggaaaaaaggaaattttgtctcacctgtgaaaaatcaggtatgcctggcaatc
tccatcctctccctgcaaaacggccacactcccagacaatacaccaggaagaacaactca
aaagggtgcctgcggcagttgctggactttctccaccactggggccctggagtctgcgat
cgccatcgcaaccggaaagatgctgtccttgagacggatgatgcccctgaaggaactatc
ctagcccctgcctctgtggagaaaggagggacagtgcacagccggcctggtgatgccatg
aggaccctgggttgtggacaggcggaacagcagctggtggactgcgcccaggacttcaat
aatcacggctgccaagggtacgtctctgaccagaaggggcccaaaacttcctcatttccc
actgaccgcttcgacaggatccagggtctccccagccaggctttcgagtatatcctgtac
aacaaggggatcatgggtgaagacacctacccctaccagggcaaggatggttattgcaag
ttccaacctggaaaggccatcggctttgtcaaggatgtagccaacatcacaatctatgac
gaggaagcgatggtggaggctgtggccctctacaaccctgtgagctttgcctttgaggtg
actcaggacttcatgatgtatagaaccggcatctactccagtacttcctgccataaaact
ccagataaagtaaaccatgcagtactggctgttgggtatggagaaaaaaatgggatccct
tactggatcgtgaaaaactcttggggtccccagtggggaatgaacgggtacttcctcatc
gagcgcggaaagaacatgtgtggcctggctgcctgcgcctcctaccccatccctctggca
ccagggagcacacaggatgtttataacatccagtgttggcaggactgttgtgaaacaagc
agcatggcctgtgccttggtgctgtttggatttaaagagatcggcagacatggctacatc
caactgagataa

>gi568815583r:78822133_79044981|GENSCAN_predicted_peptide_4|1003_aa
MACAKALRQKKANPGNRRPECETIMFLHQIFYQGLKARISSWPTLVLADLFDILLPMLNI
YQEFVRNHQYSLQILAHCKQNRDFDKLLKHYEAKPDCEERTLETFLTYPMFQIPRYILTL
HELLAHTPHEHVERNSLDYAKSKLEELSRIMHDEVSETENIRKNLAIERMIIEGCEILLD
TSQTFVRQGSLIQVPMSEKGKITRGRLGSLSLKKEGERQCFLFSKHLIICTRGSGGKLHL
TKNGVISLIDCTLLEEPESTEEEVSRSRQRPGAACPEGAHQASALLAAVVDASEGVKCVD
NIRCNGLMMNAFEENSKVTVPQMIKSDASLYCDDVDIRFSKTMNSCKVLQIRYASVERLL
ERLTDLRFLSIDFLNTFLHSYRVFTTAIVVLDKLITIYKKPISAIPARSLELLFASGQNN
KLLYGEPPKSPRATRKFSSPPPLSITKTSSPSRRRKLSLNIPIITGGKALDLAALSCNSN
GYTSMYSAMSPFSKATLDTSKLYVSSSFTNKIPDEGDTTPEKPEDPSALSKQSSEVSMRE
ESDIDQNQSDDGDTETSPTKSPTTPKSVKNKNSSEFPLFSYNNGVVMTSCRELDNNRSAL
SAASAFAIATAGANEGTPNKEKYRRMSLASAGFPPDQRNGDKEFVIRRAATNRVLNVLRH
WVSKHSQDFETNDELKCKVIGFLEEVMHDPELLTQERKAAANIIRTLTQEDPGDNQITLE
EITQMGEIPPQRQLGIQEVSVMGLTQNVAPPTQNQAEGVKAEPFENHSALEIAEQLTLLD
HLVFKKIPYEEFFGQGWMKLEKNERTPYIMKTTKHFNDISNLIASEIIRNEDINARVSAI
EKWVAVADICRCLHNYNAVLEITSSMNRSAIFRLKKTWLKVSKQTKALIDKLQKLVSSEG
RFKNLREALKNCDPPCVPYLGMYLTDLAFIEEGTPNYTEDGLVNFSKMRMISHIIREIRQ
FQQTAYKIEHQAKVTQYLLDQSFVMDEESLYESSLRIEPKLPT

>gi568815583r:78822133_79044981|GENSCAN_predicted_CDS_4|3012_bp
atggcctgtgcaaaggccctaaggcagaagaaagcaaatccagggaacagaaggccagaa
tgcgaaaccatcatgtttttacatcagatcttttaccaaggcctgaaggcccgcatctcc
agctggcccacgctggtcctggctgacctatttgacatcctgctgcccatgctcaacatc
taccaagagttcgtccgcaaccaccagtacagcctgcagatcctggcccactgcaagcag
aaccgtgacttcgacaagctgctgaagcactacgaggccaagcctgactgcgaggagagg
acgctggagaccttcctcacctaccccatgttccagatccccaggtacatcctgaccctc
catgagctcctggcccacacgcctcatgagcacgttgagcgcaacagcctggactacgcc
aagtccaaactggaggagctgtccagaataatgcacgatgaagtaagtgagacggagaac
atccggaaaaacctggccatcgagcgcatgatcatcgaaggctgtgagatcctcctggac
accagccagacctttgtgagacaaggttccctcattcaggtgcccatgtctgaaaagggc
aagatcaccagggggcgcctggggtctctctccctaaagaaagagggcgagcgacagtgc
ttcctgttttctaagcatctgattatctgtaccagaggctctggagggaagcttcacttg
accaagaatggagtcatatccctcattgactgcactttattggaggagccagaaagcacg
gaggaggaagtgagccgcagccgtcaaaggcctggggctgcttgcccagagggtgcccac
caggcctctgccctcctggcagccgttgtggatgccagtgaaggggtcaagtgtgtggat
aacatccgatgcaatgggctcatgatgaacgcatttgaagaaaattccaaggtcactgtg
ccgcagatgatcaagtccgacgcctccttatattgtgatgatgttgacattcgcttcagc
aaaaccatgaactcctgcaaagtgctgcagatccgctacgccagtgtggagcggctgctg
gagaggctgacggacctgcgcttcctgagcatcgacttcctcaacaccttcctgcactcc
taccgcgtcttcaccaccgccatcgtggtcctggacaagctcattaccatctacaagaag
cctatcagtgccattcctgccaggtcgctggagctcctgtttgccagtggccagaacaat
aagctcctgtacggtgaaccccccaagtccccgcgcgccacccgcaagttctcctcgccg
ccacctctgtccatcaccaagacatcgtcaccgagccgccggcggaagctctccctgaac
atccccatcatcactggcggcaaggccctggacctggccgccctcagctgcaactccaat
ggctacaccagcatgtactcggccatgtcacccttcagcaaggccacgctggacaccagc
aagctctatgtgtccagcagcttcaccaacaagattccagatgagggcgatacgacccct
gagaagcccgaagacccttcagcgctcagcaagcagagctcagaagtctccatgagagag
gagtcagatattgatcaaaaccagagtgatgatggtgatactgaaacatcaccaactaaa
tctccaacaacacccaaatcagtcaaaaacaaaaattcttcagagttcccactcttttcc
tataacaatggagtcgtcatgacctcctgtcgtgaactggacaataaccgcagtgccttg
tcggccgcctctgcctttgccatagcaaccgccggggccaacgagggcaccccaaacaag
gagaagtaccggaggatgtccttagccagtgcagggtttcccccagaccagaggaatgga
gacaaggagtttgtgatccgcagagcagccaccaatcgtgtcttgaacgtgctccgccac
tgggtgtccaagcactctcaggactttgagaccaacgatgagctcaaatgcaaggtgatc
ggcttcctggaagaagtcatgcacgacccggagctcctgacccaggagcggaaggctgca
gccaacatcatcaggactctgacccaggaggacccaggtgacaaccagatcacgctggag
gagatcacgcagatgggcgagatacccccacagaggcagctgggaatccaggaggtgtcc
gtcatgggcctaactcaaaatgttgctcccccaactcaaaaccaggctgaaggcgtgaag
gctgagccctttgaaaaccactcagccctggagatcgcggagcagctgaccctgctagat
cacctcgtcttcaagaagattccttatgaggagttcttcggacaaggatggatgaaactg
gaaaagaatgaaaggaccccttatatcatgaaaaccactaagcacttcaatgacatcagt
aacttgattgcttcagaaatcatccgcaatgaggacatcaacgccagggtgagcgccatc
gagaagtgggtggccgtagctgacatatgccgctgcctccacaactacaatgccgtactg
gagatcacctcgtccatgaaccgcagtgcaatcttccggctcaaaaagacgtggctcaaa
gtctctaagcagactaaagctttgattgataagctccaaaagcttgtgtcatctgagggc
agatttaagaatctcagagaagctctgaaaaattgtgacccaccctgtgtcccttacctg
gggatgtacctcaccgacctggccttcatcgaggaggggacgcccaattacacggaagac
ggcctggtcaacttctccaagatgaggatgatatcccatattatccgagagattcgccag
tttcaacaaactgcctacaaaatagagcaccaagcaaaggtaacgcaatatttactggac
caatcttttgtaatggatgaagaaagcctctacgagtcttctctccgaatagaaccaaaa
ctccccacctga