GENSCAN 1.0	Date run:  4-Nov-116	Time: 11:01:23

Sequence gi568815583r:64056026_64262986 : 206961 bp : 43.07% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -    564    559    6                               1.05
 1.02 Term -   4965   4661  305  1  2   25   42   238 0.525   8.23
 1.01 Init -   5126   5051   76  2  1   88   56   103 0.995   6.42
 1.00 Prom -   9399   9360   40                              -4.86

 2.06 PlyA -  13144  13139    6                               1.05
 2.05 Term -  17003  16906   98  0  2   89   44   113 0.835   5.13
 2.04 Intr -  19512  19467   46  0  1   89   98    40 0.708   3.08
 2.03 Intr -  25126  25077   50  2  2   63  116    -6 0.443  -1.90
 2.02 Intr -  32826  32662  165  1  0   30  111    86 0.704   5.03
 2.01 Init -  37743  37620  124  0  1   79   46   170 0.850  10.29
 2.00 Prom -  38871  38832   40                              -7.86

 3.00 Prom +  38933  38972   40                              -7.96
 3.01 Init +  39989  40147  159  1  0   81   72   127 0.566  10.49
 3.02 Intr +  56548  56677  130  0  1   82  -34   131 0.320   0.57
 3.03 Intr +  62092  62219  128  2  2   62   78    67 0.674   3.50
 3.04 Intr +  62763  62829   67  2  1   56   97    85 0.883   4.68
 3.05 Intr +  67478  67521   44  0  2  110  109     6 0.959   2.86
 3.06 Intr +  70054  70195  142  0  1   70   87    89 0.997   6.93
 3.07 Intr +  71149  71227   79  2  1   78  115    56 0.999   5.91
 3.08 Intr +  71706  71781   76  0  1   88   88    28 0.999   2.32
 3.09 Intr +  73891  74004  114  0  0   87   68   153 0.881  13.84
 3.10 Intr +  74203  74296   94  0  1   67   87   102 0.995   7.54
 3.11 Intr +  75662  75867  206  0  2  112   70   221 0.999  21.62
 3.12 Intr +  78639  78782  144  2  0   80  105   271 0.989  28.48
 3.13 Intr +  80305  80385   81  0  0  108   78    85 0.987   9.33
 3.14 Intr +  80836  80907   72  0  0   34   91    70 0.342   1.50
 3.15 Intr +  95891  96040  150  1  0   25   62   136 0.651   5.06
 3.16 Intr +  96218  96301   84  1  0   68   76   162 0.998  13.02
 3.17 Intr +  96613  96717  105  0  0   -3   85   100 0.665   1.01
 3.18 Intr +  97220  97314   95  1  2  107   74   109 0.997  10.16
 3.19 Intr +  97910  97977   68  2  2   73   94    43 0.998   1.95
 3.20 Term +  98362  98483  122  2  2   92   43   127 0.999   7.24
 3.21 PlyA +  98715  98720    6                               1.05

 4.16 PlyA -  99826  99821    6                               1.05
 4.15 Term - 100120  99998  123  1  0  120   49   336 0.998  31.28
 4.14 Intr - 100884 100700  185  1  2  136  101   319 0.999  37.51
 4.13 Intr - 104172 104079   94  0  1  118   76   108 0.978  12.14
 4.12 Intr - 106129 106016  114  1  0   70  107    87 0.998   9.44
 4.11 Intr - 106992 106827  166  2  1   75   63   311 0.944  27.26
 4.10 Intr - 107377 107237  141  0  0   71   -6   129 0.231   1.27
 4.09 Intr - 115566 115405  162  2  0   84   69    79 0.258   4.69
 4.08 Intr - 124429 124323  107  1  2  133   59   130 0.910  13.61
 4.07 Intr - 147164 147057  108  2  0  101   91    71 0.992   9.18
 4.06 Intr - 148564 148416  149  2  2   91   87   231 0.902  23.25
 4.05 Intr - 148924 148840   85  1  1  120   75    34 0.757   4.69
 4.04 Intr - 151569 151484   86  1  2  103   63   -23 0.240  -3.76
 4.03 Intr - 158099 157865  235  2  1  103   93   179 0.978  17.16
 4.02 Intr - 160688 160537  152  0  2  124  119   130 0.976  19.58
 4.01 Init - 161113 161041   73  1  1   65   44    28 0.410  -2.67
 4.00 Prom - 164067 164028   40                              -4.76

 5.00 Prom + 165929 165968   40                              -2.46
 5.01 Init + 186310 186329   20  0  2   88  115    14 0.545   3.87
 5.02 Intr + 201978 202081  104  0  2   96  103   101 0.884  12.22

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815583r:64056026_64262986|GENSCAN_predicted_peptide_1|126_aa
MAGCRSRALPRGEAAKARREIKLSAGPASGSECGARRAHTHPELALARKYGPQVPPAAPV
PTRSPGSHPGLSLHTSSQAKGAGSGLSQPRKGLPQCSSGLKGSSSAAKVGTRAEEVPRAS
EGCEGC

>gi568815583r:64056026_64262986|GENSCAN_predicted_CDS_1|381_bp
atggcgggctgcaggtcccgagccctgccccgtggggaggcagctaaggcccggcgagaa
atcaagctcagcgctgggccagccagcggctctgagtgcggggcccgccgagcccacacc
cacccggaactcgcgctggcccgcaagtacggcccgcaagtaccgcccgcagccccggtt
cccacccgcagccccggttcccacccgggcctctccctccacacctcctcgcaagctaag
ggagccggctctggcctcagccagcccaggaaggggctcccacagtgcagcagcgggctg
aagggctcctcaagtgccgccaaagtgggaacccgggcagaggaggtgccgagagcaagc
gagggctgtgagggctgctag

>gi568815583r:64056026_64262986|GENSCAN_predicted_peptide_2|160_aa
MQRVSGLLSWTLSRVLWLSGLSEPGAARQPRIMEEKALEVYDLIRTIRDPEKPNTLEELE
VVSESCVEVQEINEEEYLVIIRFTPTVPHCSLATLIGLCLRVKLQRCLPFKHKLEIYISE
GTHSTEEDINKQINDKERVAAAMENPNLREIVEQCVLEPD

>gi568815583r:64056026_64262986|GENSCAN_predicted_CDS_2|483_bp
atgcagcgggtgtccgggctgctctcctggacgctgagcagagtcctgtggctctccggc
ctctctgagccgggagctgcccggcagccccggatcatggaagagaaagcgctagaagtt
tatgatttgattagaactatccgggacccagaaaagcccaatactttagaagaactggaa
gtggtctcggaaagttgtgtggaagttcaggagataaatgaagaagaatatctggttatt
atcaggttcacgccaacagtacctcattgctctttggcgactcttattgggctgtgctta
agagtaaaacttcagcgatgtttaccatttaaacataagttggaaatctacatttctgaa
ggaacccactcaacagaagaagacatcaataagcagataaatgacaaagagcgagtggca
gctgcaatggaaaaccccaacttacgggaaattgtggaacagtgtgtccttgaacctgac
tga

>gi568815583r:64056026_64262986|GENSCAN_predicted_peptide_3|719_aa
MASGGGGCSASERLPPPFPGLEPESEGAAGGSEPEAGDSDTEGEDIFTGAAVVSKHQSPK
ITTSLLPINNGSKENGIHEEQDQEPQDLFAGKFGLKNATVELSLDSTQNNQKKVLAKTLI
SLPPQEATNSSKPQPTYEELEEEEQEDQFDLTVGITDPEKIGDGMNAYVAYKVTTQTSLP
LFRSKQFAVKRRFSDFLGLYEKLSEKHSQNGFIVPPPPEKSLIGMTKVKVGKEDSSSAEF
LEKRRAALERYLQRIVNHPTMLQDPDVREFLEKEELPRAVGTQTLSGAGLLKMFNKATDA
VSKMTIKMNESDIWFEEKLQEVECEEQRLRKLHAVVETLVNHRKELALNTAQFAKSLAML
GSSEDNTALSRALSQLAEVEEKIEQLHQEQANNDFFLLAELLSDYIRLLAIVRAAFDQRM
KTWQRWQDAQATLQKKREAEARLLWANKPDKLQQAKDEILEWESRVTQYERDFERISTVV
RKEVIRFEKEKSKDFKNHVIKYLETLLYSQQQWGPGARAWVNERCGLDRRGKPCRGFGGR
LDLPASRTMVRALEGPQGSEGQVFRVEVLCSGRRHTVPRRYSEFHALHKRIKKLYKVPDF
PSKRLPNWRTRGLEQRRQGLEAYIQGILYLNQEVPKELLEFLRLRHFPTDPKASNWGSQQ
HQRPVLSFHVDPYVCNPSPESLPNVVVNGVLQGLYSFSISPDKAQPKAACHPAPLPPMP

>gi568815583r:64056026_64262986|GENSCAN_predicted_CDS_3|2160_bp
atggcgtcgggtggtggtggctgtagcgcttcggagagactgcctccgcccttccccggc
ctggagccggagtccgagggggcggccgggggatcagaacccgaggctggggacagcgac
accgagggggaggacattttcaccggcgccgcggtggtcagtaaacatcagtctccaaag
ataactacatcccttcttcccatcaacaatggctccaaagaaaatgggatccatgaagaa
caagaccaagagccacaggatctctttgcaggcaagtttggactcaaaaatgccacagtg
gagctatccttggacagcacacaaaataatcagaagaaggtgctagccaaaacactcatt
tctcttcctcctcaggaagccacaaattcttcgaagccccagccaacctatgaggagcta
gaggaagaagaacaggaggatcaatttgatttgacagtcggtataactgatcctgagaag
ataggggatggtatgaatgcatatgtagcctacaaagttacaacacagacaagcttacca
ttgttcagaagcaaacagtttgcagtaaaaagaagatttagtgactttctgggtctttat
gagaagctttccgagaagcactctcagaatggcttcattgtccctccgcccccggagaag
agcctcatagggatgacaaaagtgaaagttgggaaggaagattcttcttctgcagaattt
cttgaaaaacggagggccgctttagaaaggtaccttcagaggattgtaaatcatcctacc
atgttacaggaccctgacgtcagagagttcttggaaaaagaagagctgccacgtgccgtg
ggtacccagacattgagtggtgctggtctcctcaagatgttcaacaaagccacagatgcc
gtcagcaaaatgaccatcaagatgaatgaatcagacatttggtttgaggagaagctccag
gaggtagagtgtgaggagcagcgcttacggaaactgcatgctgttgtagaaactctagtc
aaccataggaaagagctagcgctgaacacagcccagtttgcaaagagtctagccatgctt
gggagctctgaggacaacacggcattgtcacgggcactctcccagctggctgaggtggaa
gaaaaaattgagcagctccaccaggaacaggccaacaatgacttcttcctccttgctgag
ctcctgagtgactacattcgcctcctggccatagtccgcgctgccttcgaccagcgcatg
aagacatggcagcgctggcaggatgcccaagccacactgcagaagaagcgggaggccgag
gctcggctgctgtgggccaacaagcctgataagctgcagcaggccaaggacgagatcctc
gagtgggagtctcgggtgactcaatatgaaagggacttcgagaggatttcaacagtggtc
cgaaaagaagtgatacggtttgagaaagagaaatccaaggacttcaagaaccacgtgatc
aagtaccttgagacactcctttactcacagcagcagtggggacccggggcccgggcctgg
gtgaacgagcgctgcgggctggaccgtcgggggaaaccttgtcgagggtttgggggccgc
ttggatttgccagcctcgcggaccatggttcgagctcttgagggaccccagggctccgag
gggcaggtgttccgagtggaggtgctgtgcagcgggcgcagacacacggtgccaaggcgc
tacagcgagttccacgcgctgcacaagcggatcaagaagctgtacaaagtgcccgacttc
ccctcgaaacgcctgcccaactggaggaccagagggttggaacagcgccggcagggcttg
gaggcttacatccagggcatcctgtacctgaaccaggaggtgcccaaggagttactggaa
ttcctgagacttcggcacttccccacagaccccaaggctagcaactggggctcccagcag
caccagcggcctgtcctgagcttccatgtggatccctatgtttgcaacccctccccagag
tcgctgcccaacgtggtggtgaatggtgtgctccagggcctctacagcttcagcatcagc
ccagataaagcccagccaaaggcggcctgtcaccctgctcctctgccaccgatgccctga

>gi568815583r:64056026_64262986|GENSCAN_predicted_peptide_4|659_aa
MAVSIESAHEPDNVTSYVSLAFELSEGLPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCD
RTFTLKTVLMIAIQLLSRMEYVHSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKE
YIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQG
LKADTLKERYQKIGDTKRNTPIEALCENFPEEMATYLRYVRRLDFFEKPDYEYLRTLFTD
LFEKKGYTFDYAYDWVGRPIPTPVGSVHVDSGASAITRESHTHRDRPSQQQPLRNQVVSS
TNGELNVDDPTGAHSNAPITAHAEVEVVEEANLLLVFTPPSTLSSIKPSELKALSAEGDQ
EAGGKAKKVGGKWQTWAGEEPSPYPRPTYLLTSSASYRRPVEQRSGRGGPRSMPGLVVFS
EPGPVLCEAAFRRCPGCFRLRLWMLRLSERNMKVLLAAALIAGSVFFLLLPGPSAADEKK
KGPKVTVKVYFDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEKGFGYKNSKFHRVI
KDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTV
KTAWLDGKHVVFGKVLEGMEVVRKVESTKTDSRDKPLKDVIIADCGKIEVEKPFAIAKE

>gi568815583r:64056026_64262986|GENSCAN_predicted_CDS_4|1980_bp
atggcagtaagcatagagagtgctcatgaaccagataatgtaacaagttatgttagcctg
gcctttgagctcagtgaaggtctcccacaggtgtattactttggaccatgtgggaaatat
aatgccatggtgctggagctccttggccctagcttggaggacttgtttgacctctgtgac
cgaacatttactttgaagacggtgttaatgatagccatccagctgctttctcgaatggaa
tacgtgcactcaaagaacctcatttaccgagatgtcaagccagagaacttcctgattggt
cgacaaggcaataagaaagagcatgttatacacattatagactttggactggccaaggaa
tacattgaccccgaaaccaaaaaacacataccttatagggaacacaaaagtttaactgga
actgcaagatatatgtctatcaacacgcatcttggcaaagagcaaagccggagagatgat
ttggaagccctaggccatatgttcatgtatttccttcgaggcagcctcccctggcaagga
ctcaaggctgacacattaaaagagagatatcaaaaaattggtgacaccaaaaggaatact
cccattgaagctctctgtgagaactttccagaggagatggcaacctaccttcgatatgtc
aggcgactggacttctttgaaaaacctgattatgagtatttacggaccctcttcacagac
ctctttgaaaagaaaggctacacctttgactatgcctatgattgggttgggagacctatt
cctactccagtagggtcagttcacgtagattctggtgcatctgcaataactcgagaaagc
cacacacatagggatcggccatcacaacagcagcctcttcgaaatcaggtggttagctca
accaatggagagctgaatgttgatgatcccacgggagcccactccaatgcaccaatcaca
gctcatgccgaggtggaggtagtggaggaagctaatttactcctggtttttaccccaccc
tcaaccctctccagcataaaacctagtgagctaaaggctttgtctgcagaaggagatcaa
gaggctgggggtaaggccaagaaggtaggaggaaaatggcagacctgggctggagaagaa
ccttctccgtatcccaggcccacgtatttgctaacctcaagcgccagctaccgcaggcca
gtggaacagcgctccgggcggggcgggccgcggagcatgccggggcttgtggtcttctcg
gagcccgggcccgtgctctgcgaggccgccttccgccgctgtccgggctgctttcgcctc
cgcctgtggatgctgcgcctctccgaacgcaacatgaaggtgctccttgccgccgccctc
atcgcggggtccgtcttcttcctgctgctgccgggaccttctgcggccgatgagaagaag
aaggggcccaaagtcaccgtcaaggtgtattttgacctacgaattggagatgaagatgta
ggccgggtgatctttggtctcttcggaaagactgttccaaaaacagtggataattttgtg
gccttagctacaggagagaaaggatttggctacaaaaacagcaaattccatcgtgtaatc
aaggacttcatgatccagggcggagacttcaccaggggagatggcacaggaggaaagagc
atctacggtgagcgcttccccgatgagaacttcaaactgaagcactacgggcctggctgg
gtgagcatggccaacgcaggcaaagacaccaacggctcccagttcttcatcacgacagtc
aagacagcctggctagatggcaagcatgtggtgtttggcaaagttctagagggcatggag
gtggtgcggaaggtggagagcaccaagacagacagccgggataaacccctgaaggatgtg
atcatcgcagactgcggcaagatcgaggtggagaagccctttgccatcgccaaggagtag

>gi568815583r:64056026_64262986|GENSCAN_predicted_peptide_5|42_aa
MAVLSSWETNLVTVSSSQDNPNSSTSKLDEKNNQSQNKCGCX

>gi568815583r:64056026_64262986|GENSCAN_predicted_CDS_5|126_bp
atggcggtgctgtcttcatgggaaacaaatctggtaactgtcagttcctcacaagacaac
cctaactcctccacaagcaagctggatgagaagaacaaccaatcacagaacaagtgtgga
tgtgnn