GENSCAN 1.0	Date run:  4-Nov-116	Time: 16:13:57

Sequence gi568815583r:63055556_63256575 : 201020 bp : 42.44% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   1430   1563  134  1  2   92   78   239 0.999  21.82
 1.02 Intr +   4008   4125  118  0  1  104   55   232 0.983  21.05
 1.03 Intr +   5314   5384   71  0  2  104   98   137 0.999  13.36
 1.04 Intr +   5643   5718   76  0  1   69   79    87 0.976   4.50
 1.05 Intr +   6063   6233  171  2  0   62  102    40 0.782   2.02
 1.06 Intr +   6660   6722   63  2  0   69   75   119 0.986   6.70
 1.07 Intr +   7021   7090   70  0  1   50  116    42 0.996   1.04
 1.08 Term +   8509   8591   83  2  2   69   41   169 0.992   7.18
 1.09 PlyA +   8638   8643    6                               1.05

 2.03 PlyA -   8811   8806    6                               1.05
 2.02 Term -  12492  12195  298  2  1   20   46   194 0.581   2.15
 2.01 Init -  15279  15224   56  0  2   53   83   103 0.978   7.11
 2.00 Prom -  17966  17927   40                              -6.05

 3.00 Prom +  19388  19427   40                              -7.25
 3.01 Init +  20454  20753  300  2  0   40  115   255 0.961  20.70
 3.02 Term +  22458  22502   45  2  0   54   55    69 0.374  -3.57
 3.03 PlyA +  23112  23117    6                              -0.45

 4.02 PlyA -  23191  23186    6                               1.05
 4.01 Sngl -  25543  25040  504  1  0   27   43   252 0.702  10.39
 4.00 Prom -  26326  26287   40                              -4.75

 5.00 Prom +  27204  27243   40                              -3.95
 5.01 Sngl +  27493  27816  324  0  0   61   48   196 0.599   8.65
 5.02 PlyA +  29929  29934    6                               1.05

 6.04 PlyA -  29942  29937    6                               1.05
 6.03 Term -  33894  33727  168  0  0   75   44    96 0.251   0.80
 6.02 Intr -  34198  34079  120  1  0   80   63    42 0.332   0.67
 6.01 Init -  44044  43967   78  1  0   68   84    49 0.460   3.61
 6.00 Prom -  46377  46338   40                              -3.45

 7.00 Prom +  50485  50524   40                              -3.75
 7.01 Sngl +  54330  54620  291  2  0   60   42   208 0.631   8.80
 7.02 PlyA +  55010  55015    6                               1.05

 8.00 Prom +  57527  57566   40                              -1.25
 8.01 Init +  66317  66673  357  1  0   79   86   313 0.981  25.35
 8.02 Intr +  67081  67147   67  0  1   95   98    20 0.980   1.26
 8.03 Intr +  71304  71494  191  1  2  117   79   204 0.993  20.78
 8.04 Intr +  71798  72134  337  1  1   58  105   313 0.978  24.17
 8.05 Intr +  73930  74095  166  2  1   35   94    85 0.867   1.90
 8.06 Term +  85725  86250  526  0  1  103   44   423 0.980  32.15
 8.07 PlyA +  86333  86338    6                               1.05

 9.04 PlyA -  86411  86406    6                               1.05
 9.03 Term - 100176  99998  179  1  2  135   48    26 0.482   0.17
 9.02 Intr - 100966 100858  109  1  1   54   98    93 0.617   5.84
 9.01 Init - 116454 116449    6  0  0   84   87     0 0.108   0.44
 9.00 Prom - 124185 124146   40                              -3.25

10.00 Prom + 129662 129701   40                              -6.45
10.01 Sngl + 132110 132367  258  1  0   76   49   219 0.224  11.70
10.02 PlyA + 132947 132952    6                               1.05

11.00 Prom + 132968 133007   40                             -11.04
11.01 Init + 134070 134241  172  2  1   92   46   228 0.024  18.66
11.02 Term + 152652 152785  134  1  2  121   41    39 0.187  -0.23
11.03 PlyA + 154030 154035    6                               1.05

12.05 PlyA - 154631 154626    6                               1.05
12.04 Term - 155115 154953  163  2  1   91   37   109 0.239   2.53
12.03 Intr - 187298 187186  113  2  2   45   51    89 0.080  -0.84
12.02 Intr - 187480 187425   56  2  2  118   97    31 0.850   4.78
12.01 Init - 193966 193813  154  1  1   42   70   115 0.799   5.39
12.00 Prom - 196720 196681   40                              -4.55

13.02 PlyA - 197123 197118    6                               1.05
13.01 Term - 200196 199946  251  1  2   71   49   153 0.805   4.58

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815583r:63055556_63256575|GENSCAN_predicted_peptide_1|261_aa
AEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEK
MEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGQVRQLEEQLRIM
DQTLKALMAAEDKDSVFIFSHPSPFSLLLPLACLPPFLPLIENISKCAELEEELKTVTNN
LKSLEAQAEKYSQKEDRYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQ
KLKYKAISEELDHALNDMTSM

>gi568815583r:63055556_63256575|GENSCAN_predicted_CDS_1|786_bp
gctgaagccgacgtagcttctctgaacagacgcatccagctggttgaggaagagttggat
cgtgcccaggagcgtctggcaacagctttgcagaagctggaggaagctgagaaggcagca
gatgagagtgagagaggcatgaaagtcattgagagtcgagcccaaaaagatgaagaaaaa
atggaaattcaggagatccaactgaaagaggccaagcacattgctgaagatgccgaccgc
aaatatgaagaggtggcccgtaagctggtcatcattgagagcgacctggaacgtgcagag
gagcgggctgagctctcagaaggccaagtccgacagctggaagaacaattaagaataatg
gatcagaccttgaaagcattaatggctgcagaggataaggactcagttttcattttttcc
catccctctcctttttctctcctccttcctttggcttgtctcccaccctttctgcctctg
atcgaaaacattagcaaatgtgccgagcttgaagaagaattgaaaactgtgacgaacaac
ttgaagtcactggaggctcaggctgagaagtactcgcagaaggaagacagatatgaggaa
gagatcaaggtcctttccgacaagctgaaggaggctgagactcgggctgagtttgcggag
aggtcagtaactaaattggagaaaagcattgatgacttagaagacgagctgtacgctcag
aaactgaagtacaaagccatcagcgaggagctggaccacgctctcaacgatatgacttcc
atgtaa

>gi568815583r:63055556_63256575|GENSCAN_predicted_peptide_2|117_aa
MHVGFGEGSLTVCRGNRERLEWKNFGENLENPEGQYEFSRKDSGPSDSLLWICSASAAVE
LVCMGGPKAGTRHAHILGSVFPSGSMETPSCLKLQVPKLSDAFGLAHQSSCSYGLAL

>gi568815583r:63055556_63256575|GENSCAN_predicted_CDS_2|354_bp
atgcacgtggggtttggtgaaggttcactgacggtgtgccgtgggaacagggagaggcta
gaatggaagaactttggagaaaatctggagaatccagagggtcagtatgaattcagcagg
aaggacagtggtccctccgacagcctcctctggatctgctctgcttcagctgctgtggag
ctggtgtgcatgggtggcccaaaggcagggacaagacatgctcatatccttggaagtgtt
ttcccttccggttctatggagactcccagctgtctgaaacttcaagtgcccaaactcagt
gatgcttttggtttggcccaccagagcagctgtagctatggcctggccctttga

>gi568815583r:63055556_63256575|GENSCAN_predicted_peptide_3|114_aa
MEANRTLLLGLASDVNEGSSALIYSREATRQILWSRGIHCLQREANDREGERCFVCGREA
VVVSPEGPAGHRGAGGAEELAPLGGCCMGMGSEGTAHIMMGGLKEPLVSGKANG

>gi568815583r:63055556_63256575|GENSCAN_predicted_CDS_3|345_bp
atggaagccaacagaacactgctcttaggcctggcatcggatgtaaatgaaggcagttca
gcccttatttattctagagaagccacgaggcagatcctgtggagccgtggaatccactgt
ctccagagggaagctaatgaccgggaaggtgaaagatgctttgtctgtggcagggaagca
gttgttgtgtctccggaggggccggctgggcacaggggggccggaggagcagaagagttg
gctcctcttggcggatgctgcatggggatggggtcagaggggacagcacacatcatgatg
ggaggtctgaaggagcctttggtttctggtaaagcaaatggatga

>gi568815583r:63055556_63256575|GENSCAN_predicted_peptide_4|167_aa
MFAQLVEVAVTPPPGAAMVCTIVREASRLKTHVVTSLRLISGVPAILIPGLSVKNVIEAP
GQWSVKGKMFPGVRCPGQPEPKAWSRRLAFIPGVGWVPVSCPIPEILFRQKPKLTRKLQL
GPPLASPGPAVTEQLASFCQPPCLKVKHTKAGAASPTEGTAKQPLRC

>gi568815583r:63055556_63256575|GENSCAN_predicted_CDS_4|504_bp
atgtttgctcagctagtggaggtggcagtgactcctccacctggagcagcaatggtgtgc
accattgttagggaggcgagtaggctaaaaactcacgtagtcacttctctaaggttaatt
tctggagtgcccgctatcctcattcctgggctctcagtcaagaatgtaattgaagcccca
ggacaatggagtgtgaaaggaaagatgttccctggtgtcagatgccctggccagccagaa
ccaaaagcatggagtagacgcttggcttttattcctggtgttggctgggtccctgtgtcc
tgccctattcctgaaatcctctttaggcaaaagccaaagctaactaggaagctccagctt
gggcctcctctggcatcgccaggaccagctgtgacagaacagcttgcttccttctgccaa
cccccttgtttaaaggttaaacatacaaaggcaggagccgcaagcccaacagagggtact
gcaaagcagcccctcagatgctaa

>gi568815583r:63055556_63256575|GENSCAN_predicted_peptide_5|107_aa
MHQVSASEKPIAEESSGNEVIWKRKPPSVSATHAREDRPLPQAPVAAKRCGRVRKGVERH
SPHFNERRSPSVILSRCRFCCGGGWLQPLRFLPALGDAGAAGLWATL

>gi568815583r:63055556_63256575|GENSCAN_predicted_CDS_5|324_bp
atgcatcaggtgagtgcgtctgagaagcctatagctgaggagtcctcggggaatgaggtc
atctggaaacgcaagcctccctcggtttcagcaactcatgcacgtgaagacaggcccctt
ccccaggcccctgttgctgcgaaacggtgtgggagggtgaggaaaggtgtagagaggcac
tccccacactttaatgagcgcaggagcccgtcagtgatcttgtccagatgcagattctgt
tgtggtgggggctggctccagcctctgcgtttcttgccagctctgggtgatgccggtgct
gctggcctgtgggccacactttga

>gi568815583r:63055556_63256575|GENSCAN_predicted_peptide_6|121_aa
MTLNEHAAFKHLFNKAHLAPPLIHLTFPLVSKLTAKPSSFTVTWTFHEVGTWTHSEDHGE
LSLTYLSNIAPSLHKHYPMTSSLPELPGQELLLDTSQDEDLTVSQDKAFACFWPVLTIKK
E

>gi568815583r:63055556_63256575|GENSCAN_predicted_CDS_6|366_bp
atgactcttaacgagcatgctgccttcaagcatctgtttaacaaagcacatcttgcaccg
cccttaatccatttaacctttccactggtatcaaaactgaccgcaaagcccagctccttc
actgttacatggacatttcatgaggttggtacctggacacattctgaggaccatggagaa
ctgtcacttacataccttagcaacattgctccatctctacacaagcattatccgatgact
tcatcccttccagagcttcctgggcaggagctgctgctggacacttcccaggatgaggat
ctcaccgtctctcaggacaaggcttttgcttgcttttggcctgttctcaccattaaaaag
gaataa

>gi568815583r:63055556_63256575|GENSCAN_predicted_peptide_7|96_aa
MTCNCIRDGELGVSRAGPDNQHWSPSDKRLQCLQEGKPECQKFPLLVDWMADWGPADLQP
ADDLSMEIVHIPVLWFQVPQQPLLIGWLNYDPAVGR

>gi568815583r:63055556_63256575|GENSCAN_predicted_CDS_7|291_bp
atgacttgtaattgtatcagagatggagagttgggagtaagtagagcaggacctgacaat
cagcactggagtccgtctgataaaaggctacagtgtctacaagaagggaagcctgagtgt
cagaagtttccactccttgttgattggatggcagactggggcccagctgatttgcagcca
gctgatgacctgtccatggagattgtacacatccctgtactctggtttcaggttcctcag
cagcctttgctcataggctggcttaactatgatcctgctgtgggaagataa

>gi568815583r:63055556_63256575|GENSCAN_predicted_peptide_8|547_aa
MYRLMSAVTARAAAPGGLASSCGRRGVHQRAGLPPLGHGWVGGLGLGLGLALGVKLAGGL
RGAAPAQSPAAPDPEASPLAEPPQEQSLAPWSPQTPAPPCSRCFARAIESSRDLLHRIKD
EVGAPGIVVGVSVDGKEVWSEGLGYADVENRVPCKPETVMRIASISKSLTMVALAKLWEA
GKLDLDIPVQHYVPEFPEKEYEGEKVSVTTRLLISHLSGIRHYEKDIKKVKEEKAYKALK
MMKENVAFEQEKEGKSNEKNDFTKFKTEQENEAKCRNSKPGKKKNDFEQGELYLREKFEN
SIESLRLFKNDPLFFKPGSQFLYSTFGYTLLAAIVERASGCKYLDYMQKIFHDLDMLTTV
QEENEPVIYNRARFYVYNKKKRLVNTPYVDNSYKWAGGGFLSTVGDLLKFGNAMLYGYQV
GLFKNSNENLLPGYLKPETMVMMWTPVPNTEMSWDKEGKYAMAWGVVERKQTYGSCRKQR
HYASHTGGAVGASSVLLVLPEELDTETINNKVPPRGIIVSIICNMQSVGLNSTALKIALE
FDKDRSD

>gi568815583r:63055556_63256575|GENSCAN_predicted_CDS_8|1644_bp
atgtaccggctcatgtcagcagtgactgcccgggctgccgcccccgggggcttggcctca
agctgcggacgacgcggggtccatcagcgcgccgggctgccgcctctcggccacggctgg
gtcgggggcctcgggctggggctggggctggcgctcggggtgaagctggcaggtgggctg
aggggcgcggccccggcgcagtcccccgcggcccccgaccctgaggcgtcgcctctggcc
gagccgccacaggagcagtccctcgccccgtggtctccgcagaccccggcgccgccctgc
tccaggtgcttcgccagagccatcgagagcagccgcgacctgctgcacaggatcaaggat
gaggtgggcgcaccgggcatagtggttggagtttctgtagatggaaaagaagtctggtca
gaaggtttaggttatgctgatgttgagaaccgtgtaccatgtaaaccagagacagttatg
cgaattgctagcatcagcaaaagtctcaccatggttgctcttgccaaattgtgggaagca
gggaaactggatcttgatattccagtacaacattatgttcccgaattcccagaaaaagaa
tatgaaggtgaaaaggtttctgtcacaacaagattactgatttcccatttaagtggaatt
cgtcattatgaaaaggacataaaaaaggtgaaagaagagaaagcttataaagccttgaag
atgatgaaagagaatgttgcatttgagcaagaaaaagaaggcaaaagtaatgaaaagaat
gattttactaaatttaaaacagagcaggagaatgaagccaaatgccggaattcaaaacct
ggcaagaaaaagaatgattttgaacaaggcgaattatatttgagagaaaagtttgaaaat
tcaattgaatccctaagattatttaaaaatgatcctttgttcttcaaacctggtagtcag
tttttgtattcaacttttggctataccctactggcagccatagtagagagagcttcagga
tgtaaatatttggactatatgcagaaaatattccatgacttggatatgctgacgactgtg
caggaagaaaacgagccagtgatttacaatagagcaagattttatgtttacaataaaaag
aaacgtcttgtcaacacaccttacgtggataactcctataaatgggctggtggtggattt
ctgtctacagtgggtgaccttctgaaatttgggaatgcaatgctttatggttaccaagtt
gggctgtttaagaactcaaatgaaaatcttttacctggatacctcaaaccagaaacaatg
gttatgatgtggaccccagtccctaacacagagatgtcttgggataaagagggtaaatat
gcaatggcgtggggtgttgtggaaaggaaacaaacgtatggttcgtgtagaaagcaacgg
cattatgcttcacatactggaggggcagtgggtgccagtagtgtcctgctggtccttcct
gaagaactggatacagagactataaataacaaggttcccccaagaggaatcattgtttct
atcatatgtaacatgcaatctgttggcctcaatagcaccgctttgaagattgcccttgaa
tttgataaagacagatcagactga

>gi568815583r:63055556_63256575|GENSCAN_predicted_peptide_9|97_aa
MILARDLLHPSLEEEKKKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCS
TVLCQPTGGKARLTEGISFGILQPSDEIDDYKCLYLH

>gi568815583r:63055556_63256575|GENSCAN_predicted_CDS_9|294_bp
atgattttggctagagatttactacatccgtccttggaagaggaaaagaaaaaacataaa
aagaaacgcctagtacaaagtccaaattcttactttatggatgtaaaatgtccaggttgc
tacaagatcaccacggttttcagccatgctcagacagtggttctttgtgtaggttgttca
acagtgttgtgccagcctacaggaggaaaggccagactcacagaaggtatatcatttggc
attctccaacccagtgatgagattgatgattataaatgtctctatcttcactga

>gi568815583r:63055556_63256575|GENSCAN_predicted_peptide_10|85_aa
MAEATFRGLLKDWLGQEGSACARGQNPSSLGADTVTLNSLELCSYLVDSRNETFRKQQQQ
QQQPSGYCMINQLMMTHFIFYPHRK

>gi568815583r:63055556_63256575|GENSCAN_predicted_CDS_10|258_bp
atggctgaagccacgttcagaggcttgctcaaggactggcttgggcaagagggctcagcc
tgtgccagagggcagaatccttcttcattaggggcagacactgtgactttgaactcatta
gagctttgttcctatctagtggactctaggaatgagacattccgtaagcagcagcagcag
cagcagcagccctctggctactgtatgatcaatcagttaatgatgacacatttcatcttt
tacccgcatagaaaatga

>gi568815583r:63055556_63256575|GENSCAN_predicted_peptide_11|101_aa
MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGEGGAAARDRVENWGAGIL
NSNPGTLNICAGWTVATFSAGQCKGFRGPYMRRNTIFKSLS

>gi568815583r:63055556_63256575|GENSCAN_predicted_CDS_11|306_bp
atggcgaagacgtacgattatctcttcaagctcctgctgatcggcgactcgggggtaggc
aagacctgcctcctgttccgcttctcagaggacgccttcaacaccaccttcatctccacc
atcggtgagggaggggccgcggcccgggaccgggtagagaattggggggcgggaatccta
aactctaacccagggaccctcaacatctgtgctgggtggactgtggccacattttcagct
ggccagtgtaagggttttagaggcccttacatgagaagaaatacaatttttaagtctctg
agttga

>gi568815583r:63055556_63256575|GENSCAN_predicted_peptide_12|161_aa
MRHRGSPLHICKLEVVVATGACQELTMTWVKNSDLDKSSNRKIHRKILLGTDRTILLQEN
MLTAPADSTLSLEEKLSSMKPVPGDKKVGDHCYIEPLKVVSKKFQENTVFHVRNPATFPT
SKLSQCFGVKKLKNDPQKVGKLEVEGTWTAPKVPLCRQQEA

>gi568815583r:63055556_63256575|GENSCAN_predicted_CDS_12|486_bp
atgagacacagagggagccctttgcacatctgcaagctggaggtggtggtggccacagga
gcctgtcaagagctcacaatgacctgggtgaaaaactcagaccttgataaaagcagcaac
agaaaaatacacagaaaaatcctgctaggaactgataggaccatcttgttgcaggaaaac
atgctcacagctcccgctgattctacattgtccctggaggaaaaactgtcttccatgaaa
ccagtccctggtgacaaaaaggttggggaccactgctatatagaaccccttaaagtggtt
tccaagaaatttcaggaaaacacggtcttccatgtcagaaaccctgccacgttccccaca
tccaaattatctcagtgctttggtgtgaaaaaattgaaaaatgatccacagaaggttggg
aagctggaggtggaaggtacctggacagcaccaaaggttcccttgtgcagacagcaggaa
gcctag

>gi568815583r:63055556_63256575|GENSCAN_predicted_peptide_13|83_aa
XVRLAAPEIYGALQRERAQPAHALLLSSSAALQTEEPFTSTQQDSSPMSPFSFHTYLFNV
SDPIFNIVKGFFICDVIDQHNAL

>gi568815583r:63055556_63256575|GENSCAN_predicted_CDS_13|252_bp
ntagtcagactggcagcaccagagatttatggagctcttcagagagagagggcccaacct
gcccatgccctgcttctaagcagctcagctgccttgcagacagaggagccttttacaagc
acccagcaggactcttctccaatgtcaccattctctttccacacatacctcttcaatgtt
tctgatccaatttttaatattgtcaaaggatttttcatttgtgatgtcatagaccagcat
aatgccctataa