GENSCAN 1.0	Date run:  6-Nov-116	Time: 12:31:39

Sequence gi568815583r:34984196_35185110 : 200915 bp : 40.42% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 PlyA -   1898   1893    6                               1.05
 1.05 Term -   4254   4167   88  2  1   62   44   103 0.066  -0.55
 1.04 Intr -   9199   9072  128  1  2   32   93   125 0.194   5.96
 1.03 Intr -  16584  16479  106  2  1   33  113    91 0.170   5.40
 1.02 Intr -  31407  31293  115  1  1  130   78    76 0.437   9.39
 1.01 Init -  32535  32490   46  0  1   64   98   -21 0.437  -2.59
 1.00 Prom -  33445  33406   40                              -9.45

 2.04 PlyA -  33694  33689    6                               1.05
 2.03 Term -  35439  35278  162  0  0    5   37   253 0.545   8.85
 2.02 Intr -  55098  55014   85  2  1   37  100    99 0.043   4.90
 2.01 Init -  60172  60117   56  1  2  113  100    13 0.023   3.82
 2.00 Prom -  68322  68283   40                              -4.95

 3.00 Prom +  73415  73454   40                              -7.65
 3.01 Init +  75012  75095   84  2  0   71   59   101 0.920   6.37
 3.02 Term +  77465  77656  192  1  0   80   38   155 0.992   6.14
 3.03 PlyA +  78515  78520    6                               1.05

 4.02 PlyA -  79055  79050    6                               1.05
 4.01 Sngl -  91943  91770  174  2  0   75   55   204 0.991  10.44
 4.00 Prom -  92819  92780   40                              -6.75

 5.02 PlyA -  93049  93044    6                               1.05
 5.01 Sngl - 100915  99998  918  1  0   68   49   486 0.824  38.78
 5.00 Prom - 102020 101981   40                              -7.05

 6.00 Prom + 103609 103648   40                              -7.15
 6.01 Sngl + 108286 109017  732  0  0   76   52   579 0.984  49.07
 6.02 PlyA + 110561 110566    6                               1.05

 7.00 Prom + 118062 118101   40                              -6.15
 7.01 Init + 122881 123101  221  0  2   51   84   199 0.644  13.97
 7.02 Intr + 126505 126582   78  1  0   85  113    40 0.723   3.95
 7.03 Intr + 129119 129176   58  2  1   57   93    -6 0.198  -5.23
 7.04 Term + 131711 131839  129  1  0   85   44    75 0.419   0.00
 7.05 PlyA + 132106 132111    6                               1.05

 8.03 PlyA - 132145 132140    6                               1.05
 8.02 Term - 137618 137241  378  2  0   21   43   412 0.697  23.80
 8.01 Init - 137889 137761  129  0  0   93   45   178 0.750  14.20
 8.00 Prom - 161068 161029   40                              -4.65

 9.00 Prom + 164120 164159   40                              -4.15
 9.01 Init + 170769 170853   85  2  1   63   97    23 0.274   1.73
 9.02 Term + 177730 177890  161  2  2  140   38    89 0.899   6.22
 9.03 PlyA + 178122 178127    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  60837  60673  165  0  0   75   48   185 0.910   7.63


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815583r:34984196_35185110|GENSCAN_predicted_peptide_1|160_aa
MWENMSGVCMWSQSWGVDYTAQNVVKGQLCMVFGVVDRAWICGVESEHLQVSVSHGAKHV
SGPGLGEAKGEHLAGVEGTVGWMLPKASKAVGKVDPLSGYKGCIQWCREVGLDSKDEQVR
SKPYGGFLPASRVNGGGVGGTSPESQSARDPRTARRRQRP

>gi568815583r:34984196_35185110|GENSCAN_predicted_CDS_1|483_bp
atgtgggagaatatgagtggagtatgtatgtggtcccaaagttggggggtggattatact
gcccaaaatgtggtcaaggggcagctgtgtatggtgtttggagttgtggatagagcttgg
atatgtggggtagagtctgagcacttacaagtctctgtgagtcatggagctaaacatgtt
tctggcccgggacttggagaagctaaaggagaacatctggcaggagttgaaggaactgtg
ggctggatgttgcccaaggccagcaaggcagtgggcaaggtggaccctttgagtggttac
aaggggtgcattcagtggtgtcgagaggttggtcttgactctaaggatgaacaagtacgg
tcaaaaccctatgggggatttctgcctgcttccagggtgaatggcggtggggttgggggc
acgtctccagagtcccagtccgctcgggacccgcggaccgcccggaggcgacaacggccc
tga

>gi568815583r:34984196_35185110|GENSCAN_predicted_peptide_2|100_aa
MAHASNLSTLGGQGGRITRPKTTEVADGIEITTITFLFGREFCVTDKLLQLEEEEEEQEE
EQEEEQEKKEEEKEEEEKKEEEEGGGGGGGRGRRRKGRKK

>gi568815583r:34984196_35185110|GENSCAN_predicted_CDS_2|303_bp
atggctcacgcctctaatctcagcactttgggaggccagggtgggcggatcacaagacca
aaaacaacggaagtagcagatggaattgagattaccactattacatttctgtttggccgt
gaattttgtgtaacagataagttactccagttggaggaggaggaggaggagcaggaggag
gagcaggaggaggagcaggagaagaaggaggaggagaaggaggaggaggagaagaaggag
gaggaggagggagggggaggaggaggagggagggggaggaggaggaaggggaggaagaaa
taa

>gi568815583r:34984196_35185110|GENSCAN_predicted_peptide_3|91_aa
MALGKYEEKEKQQALFDCTEAVCADFSEELTQRRRTVSTRCDFISDLTNQQLPTLQPPTH
QIILKNPDSRVFRETDLSTNKIPVSHTAGSA

>gi568815583r:34984196_35185110|GENSCAN_predicted_CDS_3|276_bp
atggctcttggcaaatatgaggaaaaggaaaagcaacaagccttatttgactgcactgag
gctgtctgtgcagacttttcagaggaactgactcagcgcaggaggacagtttcaactcgc
tgtgatttcatctctgacctgaccaatcagcagctccccactctccaaccccctacccac
caaattatccttaaaaaccctgattcccgagttttcagggagactgatttgagtactaat
aaaattccagtctcccatacagccggctctgcgtga

>gi568815583r:34984196_35185110|GENSCAN_predicted_peptide_4|57_aa
MAARLINEINVENVVVIEMRDDCGLNQKMAIEMEKMDGFKRYVKAGISKTSLIEYGA

>gi568815583r:34984196_35185110|GENSCAN_predicted_CDS_4|174_bp
atggcagcaagactgatcaatgagatcaatgtggagaatgttgtagtcatcgagatgaga
gacgattgtggtctgaatcagaaaatggccattgagatggagaagatggatggattcaag
agatatgtaaaagctggaatcagcaagacttccttgattgaatatggagcatga

>gi568815583r:34984196_35185110|GENSCAN_predicted_peptide_5|305_aa
MSVDPACPQSLPCFEESDCKESSPMPVICGPEENYPSLQMSSAEMPHTETVSPLPSSMDL
LIQDSPDSSTSPKGKQPTSAENSVAKKEDKVPVKKQKTRTVFSSTQLCVLNDRFQRQKYL
SLQQMQELSNILNLSYKQVKTWFQNQRMKSKRWQKNNWPKNSNGVTQKASAPTYPSLYSS
YHQGCLVNPTGNLPMWSNQTWNNSTWSNQTQNIQSWSNHSWNTQTWCTQSWNNQAWNSPF
YNCGEESLQSCMHFQPNSPASDLEAALEAAGEGLNVIQQTTRYFSTPQTMDLFLNYSMNM
QPEDV

>gi568815583r:34984196_35185110|GENSCAN_predicted_CDS_5|918_bp
atgagtgtggatccagcttgtccccaaagcttgccttgctttgaagaatccgactgtaaa
gaatcttcacctatgcctgtgatttgtgggcctgaagaaaactatccatccttgcaaatg
tcttctgctgagatgcctcacacagagactgtctctcctcttccttcctccatggatctg
cttattcaggacagccctgattcttccaccagtcccaaaggcaaacaacccacttctgca
gagaatagtgtcgcaaaaaaggaagacaaggtcccggtcaagaaacagaagaccagaact
gtgttctcttccacccagctgtgtgtactcaatgatagatttcagagacagaaatacctc
agcctccagcagatgcaagaactctccaacatcctgaacctcagctacaaacaggtgaag
acctggttccagaaccagagaatgaaatctaagaggtggcagaaaaacaactggccgaag
aatagcaatggtgtgacgcagaaggcctcagcacctacctaccccagcctctactcttcc
taccaccagggatgcctggtgaacccgactgggaaccttccaatgtggagcaaccagacc
tggaacaattcaacctggagcaaccagacccagaacatccagtcctggagcaaccactcc
tggaacactcagacctggtgcacccaatcctggaacaatcaggcctggaacagtcccttc
tataactgtggagaggaatctctgcagtcctgcatgcacttccagccaaattctcctgcc
agtgacttggaggctgccttggaagctgctggggaaggccttaatgtaatacagcagacc
actaggtattttagtactccacaaaccatggatttattcctaaactactccatgaacatg
caacctgaagacgtgtga

>gi568815583r:34984196_35185110|GENSCAN_predicted_peptide_6|243_aa
MAECPASIFGTEKVNCSFDFKIGACLHGDRCSWLHHKPTFSQTIALLNIYCNPQNASQSA
DGLRCALSDVEVQEHSDEFFEEVFIELGEKYGEVEEMNVCDNLGDHLVGNVYFKLPREED
AEKAVIDLNNRWFNGQPIHAELSPVTDFRGACCRQYEMGECTRGGFCNFMHLKPISRELR
RELCGQRRKKHRSRSRSRERHSRSGDRGHGDGGGGGGGGGPGGGGGRERDRRRLRDRERS
GRF

>gi568815583r:34984196_35185110|GENSCAN_predicted_CDS_6|732_bp
atggcggagtgtccagcctccatctttggcaccgagaaagtcaactgttcatttgatttc
aaaattggagcatgtcttcatggagacaggtgctcttggttgcaccataaaccgacgttt
agccagaccattgccctcttgaacatttactgtaaccctcaaaacgcttcccagtcggcc
gacggtttgcgctgtgccctgagcgatgttgaggtgcaggaacactctgatgaatttttt
gaggaggtttttatagaactgggggagaagtatggggaagttgaggagatgaatgtctgt
gacaacctgggagaccacctggtggggaacgtgtacttcaagcttccccgtgaggaagat
gcggaaaaggctgtgattgacttgaacaaccgttggtttaacggacagccgatccacgcc
gagctgtcacctgtgacggacttcaggggagcctgctgccgtcagtatgagatgggagaa
tgcacacgaggcggcttctgcaacttcatgcatttgaagcccatttccagagagctgcgg
cgggagctgtgtgggcagcgtcgcaagaagcatagatcaagatcccgatcccgggagcgt
cattctcggtctggagaccgtggtcatggcgatggcggtggcggtggcggtggcggtggc
ccaggcggcggcggcggacgggagcgtgacaggaggcggttgagagatcgtgaaagatct
gggcgattctga

>gi568815583r:34984196_35185110|GENSCAN_predicted_peptide_7|161_aa
MNLRWSMEEVTLCQQALRGLGDSILVSWSPELPYEKSNHPAEKDHLEKPREYGAGKRAQV
NPVVQLLLTKAPDMSKKPSEDSLPFSLQPVKALSSLVYSREIKSDYLVKEIPSFFWVAKE
NLENNKEEPILRSFQIQEKLMANFEIGKSQAMGMKCNKETN

>gi568815583r:34984196_35185110|GENSCAN_predicted_CDS_7|486_bp
atgaatctcagatggtccatggaagaagtgacactgtgccagcaggctttaagaggactg
ggagattccattttggtatcttggagtcctgaattgccatatgagaagtctaaccatcct
gcagaaaaagatcatctggagaagcccagagaatatggggcaggcaaaagggctcaggtg
aatccagttgtccagctgttgctcaccaaggcaccagacatgtcaaagaaaccctctgaa
gattctcttcccttcagccttcaacctgtaaaagcccttagtagccttgtttattcaaga
gaaataaaatctgattatttagtcaaggaaattccttctttcttctgggtggccaaggaa
aatttggagaacaataaagaagagcctattcttaggagttttcaaattcaggaaaaactg
atggcaaattttgaaataggaaaaagtcaggcaatgggtatgaagtgcaataaagaaact
aactga

>gi568815583r:34984196_35185110|GENSCAN_predicted_peptide_8|168_aa
MVKYLLGQGVLRSSWDQVFAAFWQRYPNPCGKRILTEDIVHRENQTMTTFTWNINHARPM
VVEERCVYCVNSDNSGWTEIRREAWVSSSLCGVSRAVWEFGLAQFKSNVTKTLKGFEYIL
AKLQGEAASKTLIKTAREAKEKAKETALAATEKAKDLASKAATKKQQQ

>gi568815583r:34984196_35185110|GENSCAN_predicted_CDS_8|507_bp
atggtgaagtatttactgggccagggcgtgctccgcagttcctgggaccaagtgttcgcc
gccttttggcagcggtacccgaatccctgtggcaaacgtatcttgacggaagacatagta
caccgggagaatcagaccatgaccaccttcacctggaacatcaaccacgcccggccgatg
gtggtggaggaacgatgtgtttactgtgtgaactctgacaacagtggctggaccgaaatc
cgccgggaagcgtgggtctcctctagcttatgcggtgtctccagagctgtctgggaattt
ggtcttgcccagttcaaaagcaacgtgaccaagactttgaagggttttgaatatatcttg
gcgaagctgcaaggcgaggctgcttccaaaacacttattaagacagccagggaagccaag
gagaaggcaaaggagacggccctggcagctacagagaaggccaaggacctcgccagcaag
gcggccaccaagaagcagcagcagtag

>gi568815583r:34984196_35185110|GENSCAN_predicted_peptide_9|81_aa
MRKMFFFPQNILENVTFYNWLLLPSTFEDCFSSGYPILISGSSIYALAQAKGPEPILDFL
SCIPHPNSPTSYQVFNIYPAS

>gi568815583r:34984196_35185110|GENSCAN_predicted_CDS_9|246_bp
atgaggaaaatgttctttttccctcagaacattttggaaaatgtaacgttttacaactgg
ctgcttcttccttccacatttgaagactgcttctcctcaggttaccccattttgataagt
ggcagcagtatttatgcacttgctcaggctaaagggccagagcccatccttgactttctt
tcctgcattcctcatccaaattcaccaacatcctatcaagtcttcaatatataccctgca
tcttga