GENSCAN 1.0	Date run:  7-Nov-116	Time: 21:28:57

Sequence gi568815583f:82889019_83090064 : 201046 bp : 43.79% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 Intr -   3823   3667  157  0  1  102   76   272 0.952  27.41
 1.01 Init -   7524   7502   23  0  2   65   99    25 0.090   0.71
 1.00 Prom -  13798  13759   40                              -1.96

 2.00 Prom +  16464  16503   40                              -4.06
 2.01 Init +  24187  24284   98  0  2  113   92     7 0.363   3.38
 2.02 Intr +  30285  30381   97  0  1  127   53     6 0.059   1.01
 2.03 Intr +  37119  37239  121  2  1   42   81    81 0.604   2.87
 2.04 Intr +  39078  39229  152  1  2   68   91    84 0.758   6.58
 2.05 Term +  53212  53418  207  0  0   85   37   147 0.310   6.64
 2.06 PlyA +  55020  55025    6                               1.05

 3.00 Prom +  55281  55320   40                              -3.96
 3.01 Init +  63602  63736  135  1  0   53   -9   148 0.021  -0.26
 3.02 Intr +  63863  64064  202  1  1   67  110    56 0.043   4.56
 3.03 Intr +  64435  64574  140  2  2   88   52    77 0.046   4.28
 3.04 Term +  74858  74965  108  1  0   72   37   107 0.303   2.51
 3.05 PlyA +  75329  75334    6                               1.05

 4.00 Prom +  77368  77407   40                              -2.16
 4.01 Init + 100001 100142  142  1  1   56   48   156 0.937   8.70
 4.02 Term + 100863 101071  209  1  2   63   39   201 0.992  10.20
 4.03 PlyA + 101349 101354    6                               1.05

 5.12 PlyA - 102063 102058    6                               1.05
 5.11 Term - 111024 110953   72  0  0   88   38    74 0.777   0.31
 5.10 Intr - 111313 111068  246  1  0   87   86    66 0.754   3.96
 5.09 Intr - 119657 119530  128  0  2   74  100    38 0.952   4.00
 5.08 Intr - 121345 121219  127  1  1   73   74    69 0.834   4.25
 5.07 Intr - 129835 129689  147  1  0   63   69   100 0.636   6.03
 5.06 Intr - 131744 131657   88  1  1   85   92    45 0.780   4.57
 5.05 Intr - 141310 141118  193  2  1  100   70    39 0.553   1.85
 5.04 Intr - 152907 152710  198  1  0   67  110   127 0.687  12.12
 5.03 Intr - 161160 161055  106  0  1   56   97    46 0.351   2.09
 5.02 Intr - 167527 167371  157  0  1   74  111    72 0.873   8.11
 5.01 Init - 178133 177733  401  2  2   71   83   839 0.883  75.84

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  10200  10142   59  0  2   42   85    80 0.840   3.88
S.002 Init + 193815 193862   48  2  0   92   41    73 0.821   2.07


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815583f:82889019_83090064|GENSCAN_predicted_peptide_1|60_aa
MLTKSVAREQPIFTTRAHVFQIDPNTKKNWMPASKQAVTVSYFYDVTRNSYRIISVDGAK

>gi568815583f:82889019_83090064|GENSCAN_predicted_CDS_1|180_bp
atgttgaccaagagtgtggccagagaacagcccatcttcaccacccgagcgcatgtcttc
cagattgaccccaacaccaagaagaactggatgcctgcgagcaagcaggcggtcaccgtt
tcctacttctatgatgtcacaaggaacagctatcggatcatcagtgtggacggagccaag

>gi568815583f:82889019_83090064|GENSCAN_predicted_peptide_2|224_aa
MELKLSIPVPWRGWLWQPPVPKENIHFSYFASRPYSGKSQRVARPYRIKDRLACWPDAQH
KQLSPSTRAAITKYERLRIAYKQQKFISHSSDERSKVKVPVDLVSVLAVVSLLEMHCWPK
DQPEVHYWAKSIVCKGNLHLDCLDAALFPLAATATQEGRDSVLRPVFLVSSPEKVLNIQV
MVIGQRIKKGKRADELMKGDQKGIQIHTSKDGSPETYRDPETTD

>gi568815583f:82889019_83090064|GENSCAN_predicted_CDS_2|675_bp
atggagttaaagctcagcatccctgtgccctggagagggtggttatggcagccaccagtg
cccaaggagaacatccacttttcttactttgcctccaggccttactcagggaagtcacaa
cgggttgctcgtccatacaggatcaaggacaggttggcctgttggccagacgcccagcac
aaacagctcagcccatccacacgggctgctatcacaaaatacgagaggctgcgtatagct
tataaacaacagaaatttatttctcacagttctgatgagaggtccaaagtcaaggtgcca
gtagatttggtgtctgtattggcagtggtttctctgctagaaatgcactgctggcctaaa
gaccagccagaagtacactactgggctaaatctattgtgtgcaagggtaacctccacctg
gactgcttggacgcagctctcttcccactggcggccaccgcaacacaggaaggcagggac
tctgtcttacgacctgtcttcctggtgtctagcccagagaaggtactcaacattcaggtg
atggtcattggccaaaggatcaagaaaggtaaaagagctgacgaactgatgaagggtgat
cagaaaggaattcagatccatacgagtaaggatgggagtccagagacatacagggaccct
gaaactactgactag

>gi568815583f:82889019_83090064|GENSCAN_predicted_peptide_3|194_aa
MRRPVRARLSPGAAPFRGAARLPLLPLPPPPPGAGGRGLGGRAGAPRSRRFSPGPPSPRC
RPRVGAPPPHADPGPWRSAINILPDGLKVPFTPGGDFRATFTLQIREPRPGEGPEFLPKA
GTGTNLTFIPRDFHGIIFCWEHTAHISLASQDSKKVKGQGLLLPPLLPKALDDPKFWQPH
ALAASLQLSTDDEM

>gi568815583f:82889019_83090064|GENSCAN_predicted_CDS_3|585_bp
atgcggcggcccgtgcgcgcccggctcagccccggcgccgctccattccgcggggctgcg
cggctgccactgctgccactgccgccaccgccgccaggcgcgggcgggcgggggctgggc
ggccgcgctggggcgccgcgcagtcgccgcttttctcccgggccacccagtcctcggtgc
cggccccgcgttggcgcgcccccgccccacgccgacccggggccctggcgcagtgccatc
aacatcctgcctgatggacttaaagtcccattcacacctggcggggactttagggctacc
tttactttgcagataagggaaccgaggcctggggagggtcctgagtttctaccaaaggct
ggcactgggactaacctaaccttcatcccccgggacttccacgggatcatcttctgctgg
gaacacaccgcccacataagcctggcatctcaggacagtaaaaaagtcaagggacagggc
ctcttacttccacctctgctgccaaaagccttggatgatcccaagttctggcagccccat
gccctggctgcttccctacaactgagcactgacgatgagatgtag

>gi568815583f:82889019_83090064|GENSCAN_predicted_peptide_4|116_aa
MTDTAEAVPKFEEMFASRFTENDKEYQEYLKRPPESPPIVEEWNSRAGCKTTDSSEAGTT
DGGGQVTIDPISGMDDPGVTTTRNTDKNLTIPSNMDIMVTTSGLLTVTTDRNVGSF

>gi568815583f:82889019_83090064|GENSCAN_predicted_CDS_4|351_bp
atgactgacactgccgaagctgttccaaagtttgaagagatgtttgctagtagattcaca
gaaaatgacaaggagtatcaggaatacctgaaacgccctcctgagtctcctccaattgtt
gaggaatggaatagcagagctggttgcaagacaacagacagttcagaggcagggacaaca
gatgggggtggccaagtgacaatcgatccaatcagtggcatggacgatcctggggtaaca
actacccgcaacacagacaagaaccttactatccccagcaatatggacattatggttaca
accagcggcctccttacggttactactgatagaaatgttggcagcttttag

>gi568815583f:82889019_83090064|GENSCAN_predicted_peptide_5|620_aa
MASLGPAAAGEQASGAEAEPGPAGPPPPPSPSSLGPLLPLQREPLYNWQATKASLKERFA
FLFNSELLSDVRFVLGKGRGAAAAGGPQRIPAHRFVLAAGSAVFDAMFNGGMATTSAEIE
LPDVEPAAFLALLRFLYSDEVQIGPETVMTTLYTAKKYAVPALEAHCVEFLTKHLRADNA
FMLLTQARLFDEPQLASLCLDTIDKSTMDAISAEGFTDIDIDTLCAVLERDTLSIRESRL
FGAVVRWAEAECQRQQLPVTFGNKQKVLGKALSLIRFPLMTIEEFAAGPAQSGILSDREV
VNLFLHFTVNPKPRVEYIDRPRCCLRGKECCINRFQQVESRWGYSGTSDRIRFTVNRRIS
IVGFGLYGSIHGPTDYQVNIQIIEYEKKQTLGQNDTGFSCDGTANTFRVMFKEPIEILPN
VCYTACATLKGKSQSKEPERPLPPLGPVAVDPKGCVTIAIHAKPGSKQNAVTDLTAEAVN
VAIAAPPSEGEANAELCRYLSKVLELRKSDVVLDKVSEIHVASVSENGSRLGNWQGANFL
SRCQLINLSEEHNCQIDCIVGSASENILSLWEISLRESSFEGCLESLESEPGKLGARGWT
YGISQPQKVFWDNTGDNDPS

>gi568815583f:82889019_83090064|GENSCAN_predicted_CDS_5|1863_bp
atggcctcactcgggcctgccgcagctggggagcaggcgtcgggggctgaggcggagccg
ggccccgcggggccgccgccgccgccctcaccgtcctctctggggcccctgctccccctg
cagcgggaacctctctacaactggcaggcgaccaaggcgtcgctgaaggagcgcttcgcc
ttcctcttcaactcggagctgctgagcgatgtgcgcttcgtactgggcaagggtcgcggc
gccgccgccgctgggggcccgcagcgcatccccgcccaccgcttcgtgctggcggccggc
agcgccgtctttgacgccatgttcaacggcggcatggccaccacgtcggccgagatcgag
ctgccggacgtggagcccgcagccttcctggcgctgctgagatttctatattcagatgaa
gttcaaattggtccagaaacagttatgaccactctttatactgccaagaaatacgcagtc
ccagccttggaagcacactgtgtagaatttctcaccaaacatcttagggcagataatgcc
tttatgttacttactcaggctcgattatttgatgaacctcagcttgctagtctttgtcta
gatacaatagacaaaagcacaatggatgcaataagtgcagaagggtttactgatattgat
atagatacactctgtgcagttttagagagagacacactcagtattcgagaaagtcgactt
tttggagctgttgtacgctgggcagaagcagaatgtcagagacaacaattacctgtgact
tttgggaataaacaaaaagttctaggaaaagcactttccttaatccggttcccactgatg
acaattgaggaatttgcagcaggtcctgctcaatctggaattttgtcagatcgtgaagtg
gtaaacctctttcttcattttactgtcaaccctaaaccccgagttgaatacattgaccga
ccaagatgctgtctcaggggaaaggaatgctgcatcaatagattccagcaagtagaaagc
cgctggggttacagtgggacgagtgatcgaatcagattcacagttaatagaaggatctct
atagttggatttggcttgtatggatctattcatggccctacagattatcaagtgaatata
cagatcattgaatatgagaaaaagcaaaccctgggacagaatgataccggctttagttgt
gatgggacagctaacacattcagggtcatgttcaaggaacccatagagatcctgcccaat
gtgtgctacacagcatgtgcaacactcaaaggtaaaagccagagcaaggaaccagagaga
ccacttcctcccttaggtcctgtggcagttgatcctaaaggatgcgtcaccatagccatc
catgcaaaacctggctccaaacaaaatgctgtaacagatttgacagcagaggctgtaaat
gtagctattgcagcacctccatcagagggagaggctaatgctgagctctgtcggtatctt
tccaaggtcctagaactcaggaagagtgatgtggttttggataaggtttcagaaatccac
gtagccagtgtttctgaaaatggatctaggctgggcaattggcaaggagctaatttctta
tcaagatgccagcttattaacttgagtgaagaacacaactgccaaatagactgtatagtg
ggatctgctagtgagaacattctgtccctttgggaaatctctttaagagaatcatcattt
gaaggctgcttggagagcctggaatcagagccagggaaattaggggccaggggatggacc
tatggtatcagccagccacagaaggtcttttgggacaacactggagataatgatccttca
tag