GENSCAN 1.0	Date run:  3-Nov-116	Time: 23:26:03

Sequence gi568815583f:78773018_78997064 : 224047 bp : 48.24% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.14 Intr -    186     66  121  0  1  105   47   241 0.676  21.77
 1.13 Intr -   1283   1150  134  0  2   84   75   340 0.550  32.66
 1.12 Intr -   1776   1607  170  2  2  126  113   224 0.999  28.29
 1.11 Intr -   3316   3171  146  1  2   37   83   127 0.997   6.18
 1.10 Intr -   3824   3732   93  2  0   87   97    71 0.986   8.06
 1.09 Intr -   4571   4427  145  1  1   93   76   234 0.918  22.98
 1.08 Intr -  15357  15214  144  2  0   63   80   206 0.947  16.70
 1.07 Intr -  16821  16672  150  2  0   76   84   230 0.991  20.68
 1.06 Intr -  17777  17653  125  2  2   78   84   113 0.996   9.28
 1.05 Intr -  18206  18123   84  2  0  115  105   118 0.999  16.22
 1.04 Intr -  23862  23573  290  1  2   96  101   275 0.536  26.56
 1.03 Intr -  25096  24931  166  1  1  116   91   163 0.891  18.93
 1.02 Intr -  27530  27175  356  0  2  104  105   667 0.914  65.01
 1.01 Init -  38203  38104  100  1  1   80   94   118 0.889  10.03
 1.00 Prom -  47353  47314   40                              -5.56

 2.00 Prom +  51248  51287   40                              -3.76
 2.01 Init +  57947  58176  230  1  2   81   12   173 0.524   5.04
 2.02 Intr +  58188  58727  540  0  0   62   50   717 0.293  57.32
 2.03 Intr +  58999  59128  130  1  1   76   55   113 0.262   7.50
 2.04 Intr +  67535  67658  124  1  1   45   98    62 0.036   3.06
 2.05 Term +  89657  89910  254  0  2   53   38   134 0.082   0.70
 2.06 PlyA +  89929  89934    6                               1.05

 3.00 Prom +  94751  94790   40                              -4.36
 3.01 Init + 100390 100712  323  0  2   51   52   249 0.803  12.41
 3.02 Intr + 113124 113210   87  0  0  101   89   107 0.995  11.19
 3.03 Intr + 117972 117997   26  0  2  130   69    25 0.800   2.47
 3.04 Intr + 118467 118555   89  1  2   54   82    61 0.991   1.79
 3.05 Intr + 119195 119296  102  1  0   88   93    60 0.982   6.87
 3.06 Intr + 120522 120610   89  2  2   65   60    76 0.903   1.27
 3.07 Term + 123966 124050   85  0  1   84   54   102 0.822   3.53
 3.08 PlyA + 124193 124198    6                               1.05

 4.15 PlyA - 124307 124302    6                               1.05
 4.14 Term - 145092 144958  135  0  0   59   42   128 0.710   3.32
 4.13 Intr - 149188 149119   70  0  1   76   50    83 0.709   2.48
 4.12 Intr - 150101 149976  126  1  0   92  102    28 0.951   4.39
 4.11 Intr - 152423 152317  107  2  2   87  109   163 0.989  17.31
 4.10 Intr - 154764 154696   69  0  0   84   78   139 0.935  11.88
 4.09 Intr - 156476 156395   82  1  1  101   88   122 0.997  13.14
 4.08 Intr - 158489 158368  122  2  2   92   28   163 0.851   9.99
 4.07 Intr - 158961 158852  110  1  2   35   75    77 0.705   1.10
 4.06 Intr - 159441 159355   87  1  0  114   91   116 0.723  14.44
 4.05 Intr - 162065 161882  184  2  1   60   31   115 0.321   2.36
 4.04 Intr - 162733 162663   71  2  2   78   96    40 0.949   2.70
 4.03 Intr - 164406 164301  106  0  1   93   68   149 0.908  13.19
 4.02 Intr - 168085 168054   32  2  2  120   48    38 0.329   0.85
 4.01 Init - 171964 171874   91  1  1   64   73   200 0.495  14.75
 4.00 Prom - 183021 182982   40                              -0.96

 5.10 PlyA - 184088 184083    6                               1.05
 5.09 Term - 189219 189127   93  0  0  125   48    50 0.361   2.53
 5.08 Intr - 198917 198849   69  2  0  105  121    74 0.999  11.78
 5.07 Intr - 200403 200286  118  2  1   39   74   213 0.553  15.47
 5.06 Intr - 207682 207603   80  1  2   94  106    41 0.966   4.85
 5.05 Intr - 212187 211990  198  0  0   32   80   328 0.973  25.95
 5.04 Intr - 217256 217172   85  1  1  111   86    76 0.989   9.52
 5.03 Intr - 218867 218674  194  2  2   18   80   176 0.313   8.09
 5.02 Intr - 222783 222723   61  2  1   91   89    92 0.904   8.34
 5.01 Init - 223547 223525   23  2  2   92   94    46 0.890   4.15

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815583f:78773018_78997064|GENSCAN_predicted_peptide_1|742_aa
MPGGPSPRSPAPLLRPLLLLLCALAPGAPGPAPGRATEGRAALDIVHPVRVDAGGSFLSY
ELWPRALRKRDVSVRRDAPAFYELQYRGRELRFNLTANQHLLAPGFVSETRRRGGLGRAH
IRAHTPACHLLGEVQDPELEGGLAAISACDGLKGVFQLSNEDYFIEPLDSAPARPGHAQP
HVVYKRQAPERLAQRGDSSAPSTCGVQVPQRELTEERPWRRVPWACPLAANSTPSGPPVY
PELESRRERWEQRQQWRRPRLRRLHQRSVSKEKWVETLVVADAKMVEYHGQPQVESYVLT
IMNMVAGLFHDPSIGNPIHITIVRLVLLEDEEEDLKITHHADNTLKSFCKWQKSINMKGD
AHPLHHDTAILLTRKDLCAAMNRPCETLGLSHVAGMCQPHRSCSINEDTGLPLAFTVAHE
LGHSFGIQHDGSGNDCEPVGKRPFIMSPQLLYDAAPLTWSRCSRQYITRFLDRGWGLCLD
DPPAKDIIDFPSVPPGVLYDVSHQCRLQYGAYSAFCEDMDNVCHTLWCSVGTTCHSKLDA
AVDGTRCGENKWCLSGECVPVGFRPEAVDGGWSGWSAWSICSRSCGMGVQSAERQCTQPT
PKYKGRYCVGERKRFRLCNLQACPAGRPSFRHVQCSHFDAMLYKGQLHTWVPVVNDVNPC
ELHCRPANEYFAEKLRDAVVDGTPCYQVRASRDLCINGICKNVGCDFEIDSGAMEDRCGV
CHGNGSTCHTVSGTFEEAEGLX

>gi568815583f:78773018_78997064|GENSCAN_predicted_CDS_1|2226_bp
atgcccggcggccccagtccccgcagccccgcgcctttgctgcgccccctcctcctgctc
ctctgcgctctggctcccggcgcccccggacccgcaccaggacgtgcaaccgagggccgg
gcggcactggacatcgtgcacccggttcgagtcgacgcggggggctccttcctgtcctac
gagctgtggccccgcgcactgcgcaagcgggatgtatctgtgcgccgagacgcgcccgcc
ttctacgagctacaataccgcgggcgcgagctgcgcttcaacctgaccgccaatcagcac
ctgctggcgcccggctttgtgagcgagacgcggcggcgcggcggcctgggccgcgcgcac
atccgggcccacaccccggcctgccacctgcttggcgaggtgcaggaccctgagctcgag
ggtggcctggcggccatcagcgcctgcgacggcctgaaaggtgtgttccagctctccaac
gaggactacttcattgagcccctggacagtgccccggcccggcctggccacgcccagccc
catgtggtgtacaagcgtcaggccccggagaggctggcacagcggggtgattccagtgct
ccaagcacctgtggagtgcaagtgccccagagagagctcactgaggagaggccctggaga
cgtgtgccctgggcctgtccactggcagctaactccaccccatctgggcctccagtgtac
ccagagctggagtctcgacgggagcgttgggagcagcggcagcagtggcggcggccacgg
ctgaggcgtctacaccagcggtcggtcagcaaagagaagtgggtggagaccctggtagta
gctgatgccaaaatggtggagtaccacggacagccgcaggttgagagctatgtgctgacc
atcatgaacatggtggctggcctgtttcatgaccccagcattgggaaccccatccacatc
accattgtgcgcctggtcctgctggaagatgaggaggaggacctaaagatcacgcaccat
gcagacaacaccctgaagagcttctgcaagtggcagaaaagcatcaacatgaagggggat
gcccatcccctgcaccatgacactgccatcctgctcaccagaaaggacctgtgtgcagcc
atgaaccggccctgtgagaccctgggactgtcccatgtggcgggcatgtgccagccgcac
cgcagctgcagcatcaacgaggacacgggcctgccgctggccttcactgtagcccacgag
ctcgggcacagttttggcattcagcatgacggaagcggcaatgactgtgagcccgttggg
aaacgacctttcatcatgtctccacagctcctgtacgacgccgctcccctcacctggtcc
cgctgcagccgccagtatatcaccaggttccttgaccgtgggtggggcctgtgcctggac
gaccctcctgccaaggacattatcgacttcccctcggtgccacctggcgtcctctatgat
gtaagccaccagtgccgcctccagtacggggcctactctgccttctgcgaggacatggat
aatgtctgccacacactctggtgctctgtggggaccacctgtcactccaagctggatgca
gctgtggacggcacccggtgtggggagaataagtggtgtctcagtggggagtgcgtaccc
gtgggcttccggcccgaggccgtggatggtggctggtctggctggagcgcctggtccatc
tgctcacggagctgtggcatgggcgtacagagcgccgagcggcagtgcacgcagcctacg
cccaaatacaaaggcagatactgtgtgggtgagcgcaagcgcttccgcctctgcaacctg
caggcctgccctgctggccgcccctccttccgccacgtccagtgcagccactttgacgct
atgctctacaagggccagctgcacacatgggtgcccgtggtcaatgacgtgaacccctgc
gagctgcactgccggcccgcgaatgagtactttgccgagaagctgcgggacgccgtggtc
gatggcaccccctgctaccaggtccgagccagccgggacctctgcatcaacggcatctgt
aagaacgtgggctgtgacttcgagattgactccggtgctatggaggaccgctgtggtgtg
tgccacggcaacggctccacctgccacaccgtgagcgggaccttcgaggaggccgagggc
ctggnn

>gi568815583f:78773018_78997064|GENSCAN_predicted_peptide_2|425_aa
MASARGRVESPELSGPCFPSAGRKRRRGLLPNSSLGNGSENTSPARSPRSLHGLDGVAGA
VRAPALRALIAGAYWALPGGQRLVLVRVRSQQWRRHWLLNCFLLNLAATDLQFVLTLPFW
AVDTARDFSWPFGGAICKVMLTLTVLNMYASIFLLSAMSVARYCIVTGALPPSHRGASRA
SCVCCLLWAMAVLATAPTALFATAARVGGKHSCLLRFPAGGPKWQVLYHLQKIAVAFVLP
LATLGTCSLLLRFLRLWAFESCVAEPSGRCPSEQAPTAAPQRLHSSNEGRLSLRQYQGHG
QKRMIPFPHPQVTDALGRYSNYILSSTVESPSLRSMNFEKQGGNLEKDTQTQTPTSGNLG
ESHVQTKAETGVMLLQAKEHQMLLQAKERQRLPANHQKLGERNGTDSSSQSTEGTKPTNT
FIWDV

>gi568815583f:78773018_78997064|GENSCAN_predicted_CDS_2|1278_bp
atggcatccgccagaggcagggtcgaatcgcccgagctgtctgggccgtgcttcccttca
gctggccggaagaggcgtcgggggctgctccctaacagctccctgggcaacggatcagag
aacactagcccggcccggagtccccgcagcctgcatggcctggacggggtggcgggggcc
gtccgggcgccggcgctgcgggctctgattgcgggcgcctactgggccctgcctggtggg
caacggctggtgctagtccgggtgaggtcccagcagtggcgccgccactggctgctcaat
tgcttcctcctcaatctggcagccactgacctgcagtttgtgctaacgctgcccttttgg
gccgtggacacggcgcgcgactttagctggcccttcgggggtgccatctgcaaggtgatg
ctgacgctcaccgtgctcaacatgtatgccagcatcttcctcctcagtgccatgagcgtg
gcacgctattgcattgtgactggcgcgctgcctccgagccatcggggcgcatcacgggcc
agctgtgtgtgctgcctgctctgggctatggccgtcctggctacggcgcccaccgccctg
ttcgccacggcagctagggtggggggaaagcactcgtgcctgctgcgcttccccgccggc
ggccccaaatggcaggtgctctaccacctgcagaagatcgcagtagccttcgtgctgccg
ctggccacgctgggcacctgttcgctgctgctgcgcttcctgcgactgtgggccttcgag
agctgtgtagctgagcccagcggccggtgcccctccgagcaagctcccacggcagcgccc
cagcggctgcactcttccaatgagggccgcttgtcgctgcgtcagtatcaagggcatggg
caaaaaagaatgatccccttcccccatcctcaagtgactgatgctcttggaagatactcc
aactatatcctgagtagcactgtggagagccccagtctgagaagcatgaactttgagaag
caagggggaaatttggaaaaagacacacaaacccagacaccaacatctggaaacctggga
gaaagccatgtgcagacgaaggcagaaactggggtaatgcttctacaagctaaggaacac
caaatgctcctgcaagctaaggaacgccaaagattgccagcaaaccaccagaagctaggg
gagaggaatggcacagattcttcctcacagtccacagaaggaaccaaacctaccaacacc
tttatatgggatgtctag

>gi568815583f:78773018_78997064|GENSCAN_predicted_peptide_3|266_aa
MWRRGGRGGGCFGRSCGAPGRLGSYDGFFGASWSPGVVAFGGNSAADGGGFGATGREKCV
VKWPLQDGGAIMAAGVSVPYGGTAYGQMQRPLPRRPEGCRGPPHTTECWDEWVPESRVLK
YVDTNLQKQRELQKANQKTKKNKQKTPGNGDGGSTSETPQPPRKKRARVDPTVENEETFM
NRVEVKVKIPEELKPWLVDDWDLITRQKQLFYLPAKKNVDSILEDYANYKKSRGNTDNKY
LAKNSATLFSASDYEVAPPEYHRKAV

>gi568815583f:78773018_78997064|GENSCAN_predicted_CDS_3|801_bp
atgtggcggcggggggggaggggcggtggctgtttcgggcggtcctgcggcgcgcccggc
cgcttgggcagctacgacgggtttttcggtgcttcctggagccccggggtggttgcgttc
ggtggcaactcagctgcggatgggggtgggtttggcgccacggggcgggagaagtgcgtt
gtaaaatggccgttgcaagatggcggcgccatcatggccgccggcgtctcggtcccgtat
ggaggcacagcttacgggcagatgcagcgcccccttccacgacgaccagaaggttgccgg
ggccctccgcataccacagagtgttgggatgaatgggttccggagagcagagtactcaaa
tacgtggacaccaatttgcagaaacagcgagaacttcaaaaagccaatcagaaaacgaaa
aagaacaaacagaaaacacctggaaatggagatggtggcagtaccagtgagacccctcag
cctcctcggaagaaaagggcccgggtagatcctactgttgaaaatgaggaaacattcatg
aacagagttgaagttaaagtaaagattcctgaagagctaaaaccgtggcttgttgatgac
tgggacttaattaccaggcaaaaacagctcttttatcttcctgccaagaagaatgtggat
tccattcttgaggattatgcaaattacaagaaatctcgtggaaacacagataataagtac
ctggcaaagaattctgcaactttgttcagtgccagcgattatgaagtggctcctcctgag
taccatcggaaagctgtgtga

>gi568815583f:78773018_78997064|GENSCAN_predicted_peptide_4|463_aa
MWATLPLLCAGAWLLGVPVCGAAELCVNSLEKNVKVIKHKNHRKTYSTEEYHHRLQTFAS
NWRKINAHNNGNHTFKMALNQFSDMSFAEIKHKYLWSEPQNCSATKSNYLRGTGPYPPSV
DWRKKGNFVSPVKNQVCLAISILSLQNGHTPRQYTRKNNSKGCLRQLLDFLHHWGPGVCD
RHRNRKDAVLETDDAPEGTILAPASVEKGGTVHSRPGDAMRTLGCGQAEQQLVDCAQDFN
NHGCQGYVSDQKGPKTSSFPTDRFDRIQGLPSQAFEYILYNKGIMGEDTYPYQGKDGYCK
FQPGKAIGFVKDVANITIYDEEAMVEAVALYNPVSFAFEVTQDFMMYRTGIYSSTSCHKT
PDKVNHAVLAVGYGEKNGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASYPIPLA
PGSTQDVYNIQCWQDCCETSSMACALVLFGFKEIGRHGYIQLR

>gi568815583f:78773018_78997064|GENSCAN_predicted_CDS_4|1392_bp
atgtgggccacgctgccgctgctctgcgccggggcctggctcctgggagtccccgtctgc
ggtgccgccgaactgtgcgtgaactccttagaaaagaatgtgaaggtgatcaagcataaa
aatcaccgtaagacctacagtacggaggagtaccaccacaggctgcagacgtttgccagc
aactggaggaagataaacgcccacaacaatgggaaccacacatttaaaatggcactgaac
caattttcagacatgagctttgctgaaataaaacacaagtatctctggtcagagcctcag
aattgctcagccaccaaaagtaactaccttcgaggtactggtccctacccaccttccgtg
gactggcggaaaaaaggaaattttgtctcacctgtgaaaaatcaggtatgcctggcaatc
tccatcctctccctgcaaaacggccacactcccagacaatacaccaggaagaacaactca
aaagggtgcctgcggcagttgctggactttctccaccactggggccctggagtctgcgat
cgccatcgcaaccggaaagatgctgtccttgagacggatgatgcccctgaaggaactatc
ctagcccctgcctctgtggagaaaggagggacagtgcacagccggcctggtgatgccatg
aggaccctgggttgtggacaggcggaacagcagctggtggactgcgcccaggacttcaat
aatcacggctgccaagggtacgtctctgaccagaaggggcccaaaacttcctcatttccc
actgaccgcttcgacaggatccagggtctccccagccaggctttcgagtatatcctgtac
aacaaggggatcatgggtgaagacacctacccctaccagggcaaggatggttattgcaag
ttccaacctggaaaggccatcggctttgtcaaggatgtagccaacatcacaatctatgac
gaggaagcgatggtggaggctgtggccctctacaaccctgtgagctttgcctttgaggtg
actcaggacttcatgatgtatagaaccggcatctactccagtacttcctgccataaaact
ccagataaagtaaaccatgcagtactggctgttgggtatggagaaaaaaatgggatccct
tactggatcgtgaaaaactcttggggtccccagtggggaatgaacgggtacttcctcatc
gagcgcggaaagaacatgtgtggcctggctgcctgcgcctcctaccccatccctctggca
ccagggagcacacaggatgtttataacatccagtgttggcaggactgttgtgaaacaagc
agcatggcctgtgccttggtgctgtttggatttaaagagatcggcagacatggctacatc
caactgagataa

>gi568815583f:78773018_78997064|GENSCAN_predicted_peptide_5|306_aa
MLQLRDPRTLTQEDPGDNQITLEEITQMGEIPPQRQLGIQEVSVMGLTQNVAPPTQNQAE
GVKAEPFENHSALEIAEQLTLLDHLVFKKIPYEEFFGQGWMKLEKNERTPYIMKTTKHFN
DISNLIASEIIRNEDINARVSAIEKWVAVADICRCLHNYNAVLEITSSMNRSAIFRLKKT
WLKVSKQTKALIDKLQKLVSSEGRFKNLREALKNCDPPCVPYLGMYLTDLAFIEEGTPNY
TEDGLVNFSKMRMISHIIREIRQFQQTAYKIEHQAKVTQYLLDQSFVMDEESLYESSLRI
EPKLPT

>gi568815583f:78773018_78997064|GENSCAN_predicted_CDS_5|921_bp
atgctccagctgcgggaccccaggactctgacccaggaggacccaggtgacaaccagatc
acgctggaggagatcacgcagatgggcgagatacccccacagaggcagctgggaatccag
gaggtgtccgtcatgggcctaactcaaaatgttgctcccccaactcaaaaccaggctgaa
ggcgtgaaggctgagccctttgaaaaccactcagccctggagatcgcggagcagctgacc
ctgctagatcacctcgtcttcaagaagattccttatgaggagttcttcggacaaggatgg
atgaaactggaaaagaatgaaaggaccccttatatcatgaaaaccactaagcacttcaat
gacatcagtaacttgattgcttcagaaatcatccgcaatgaggacatcaacgccagggtg
agcgccatcgagaagtgggtggccgtagctgacatatgccgctgcctccacaactacaat
gccgtactggagatcacctcgtccatgaaccgcagtgcaatcttccggctcaaaaagacg
tggctcaaagtctctaagcagactaaagctttgattgataagctccaaaagcttgtgtca
tctgagggcagatttaagaatctcagagaagctctgaaaaattgtgacccaccctgtgtc
ccttacctggggatgtacctcaccgacctggccttcatcgaggaggggacgcccaattac
acggaagacggcctggtcaacttctccaagatgaggatgatatcccatattatccgagag
attcgccagtttcaacaaactgcctacaaaatagagcaccaagcaaaggtaacgcaatat
ttactggaccaatcttttgtaatggatgaagaaagcctctacgagtcttctctccgaata
gaaccaaaactccccacctga