GENSCAN 1.0	Date run:  5-Nov-116	Time: 05:05:23

Sequence gi568815583f:69352949_69555504 : 202556 bp : 45.14% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   1003   1064   62  0  2   64   36    97 0.372   2.82
 1.02 Intr +   4162   4259   98  1  2   49   48    88 0.357   0.55
 1.03 Intr +   5052   5227  176  1  2   55   40   108 0.298   2.36
 1.04 Intr +  26935  27062  128  0  2  140   42    86 0.022   8.68
 1.05 Intr +  30707  31069  363  2  0  -29   96   322 0.321  15.60
 1.06 Intr +  31729  31934  206  1  2   72   71   194 0.927  14.94
 1.07 Intr +  36706  36832  127  2  1   95   84   175 0.978  17.54
 1.08 Intr +  38216  38229   14  2  2  121   94     4 0.306  -1.28
 1.09 Intr +  41971  42112  142  2  1  143   86   -14 0.310   3.31
 1.10 Intr +  44520  44616   97  0  1   81   86    88 0.521   7.91
 1.11 Intr +  45510  45557   48  2  0   39  117    33 0.502   0.18
 1.12 Intr +  47026  47167  142  0  1   73  109   113 0.915  11.83
 1.13 Term +  50633  50874  242  0  2  104   41   122 0.984   5.29
 1.14 PlyA +  52670  52675    6                              -0.45

 2.00 Prom +  52683  52722   40                              -4.46
 2.01 Init +  58032  58085   54  2  0   80   33    34 0.255  -1.62
 2.02 Intr +  64435  64563  129  0  0   87   76    86 0.937   8.19
 2.03 Intr +  68699  68804  106  1  1  107   60    72 0.984   6.09
 2.04 Intr +  69044  69180  137  0  2   86   92    20 0.982   2.49
 2.05 Intr +  69378  69487  110  2  2   84  108    53 0.999   5.98
 2.06 Intr +  70211  70381  171  2  0   91  108    88 0.999  10.16
 2.07 Intr +  73122  73234  113  0  2  104   50    63 0.999   4.12
 2.08 Intr +  73388  73509  122  0  2  108  103    55 0.996   9.21
 2.09 Intr +  76163  76265  103  1  1   88  105    47 0.596   6.15
 2.10 Intr +  82535  82614   80  0  2   78  121    23 0.002   3.87
 2.11 Intr +  82704  82823  120  2  0   64   19   117 0.752   3.09
 2.12 Intr +  83190  83313  124  2  1   92   60    16 0.763  -0.64
 2.13 Intr +  83616  83774  159  1  0   49   73   166 0.869  11.16
 2.14 Intr +  85300  85457  158  2  2   96   76   130 0.967  12.33
 2.15 Intr +  86956  87129  174  0  0   48   56   168 0.960   9.74
 2.16 Intr +  87360  87539  180  2  0   39   95   150 0.999  10.86
 2.17 Intr +  87820  88131  312  0  0   96   44    80 0.576   0.78
 2.18 Intr +  91842  92093  252  2  0   79   93   181 0.981  15.33
 2.19 Intr +  93061  93143   83  0  2   91  106     4 0.894   0.94
 2.20 Intr +  93335  93416   82  2  1   68   49    86 0.837   2.34
 2.21 Intr +  93923  93993   71  1  2   90   89    28 0.166   1.08
 2.22 Intr +  99961 100072  112  1  1   22  113   147 0.083  10.98
 2.23 Intr + 100699 100773   75  0  0   43  116    30 0.663   1.01
 2.24 Intr + 102222 102339  118  2  1   62   91    77 0.974   5.44
 2.25 Intr + 104654 104729   76  0  1  107   77    75 0.158   6.87
 2.26 Intr + 109057 109084   28  1  1   74   92    -3 0.100  -3.18
 2.27 Intr + 115336 115445  110  0  2   67  116    71 0.602   6.88
 2.28 Term + 126785 126926  142  2  1   79   43   122 0.651   4.20
 2.29 PlyA + 126957 126962    6                               1.05

 3.00 Prom + 127459 127498   40                              -4.66
 3.01 Init + 133717 133788   72  0  0   65  101    59 0.119   5.97
 3.02 Intr + 173034 173201  168  2  0   12   35   165 0.062   3.74
 3.03 Term + 186571 186708  138  0  0  104   48   150 0.269  10.56
 3.04 PlyA + 188359 188364    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 100001 100072   72  1  0  107  113   114 0.845  16.87
S.002 Term + 102480 102559   80  1  2   83   40   153 0.974   7.93
S.003 Init - 141120 140973  148  0  1   64   82   103 0.851   7.55


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815583f:69352949_69555504|GENSCAN_predicted_peptide_1|614_aa
MTDVDDQEEIALLPDNGSEEDYSFAFRYDCKLPAASLEAKQNPVPCFLSSLQNCTYKQGL
WVFRGRERTPLTDEDYEEGSQEVVDFGPVMIGVKEEIYYGKFPTLLFFAKSKVFHEQGIL
FGYRHPQSSATACILSLFQMTNETLNIWTHLLPFWVSGPSVFMVEGEWASVLMVEGEWAS
VLMVEGEWASVLMVEGEWAFVFMVEGEWAFVFMVEGEWAFVFMVEGEWAFVFMVEGEWAF
VFMVEGEWAFVFMVEGEWPSVFIVEGERALCIHGGGFFAWRFVTALYMTDIKNDSYSWPM
LVYMCTSCVYPLVSSCAHTFSSMSKNARHICYFLDYGAVNLFSLGSAIAYSAYTFPDALM
CTTFHDYYVALAVLNTILSTGLSCYSRKKQADPALQLERLVRLPLGKHFIRPSEMLSQVT
ENPCFGGWPSPATARFLRVFLEIQKPRLCKVIRVLAFAYPYTWDSLPIFYRGKTMDLIGS
AVPVQYPLFLFPGESAQNEATSYHQKHMIMTLLASFLYSAHLPERLAPGRFDYIGHSHQL
FHVCVILATHMQMEAILLDKTLRKEWLLATSKPFSFSQIAGAILLCIIFSLSNIIYFSAA
LYRIPKPELHKKET

>gi568815583f:69352949_69555504|GENSCAN_predicted_CDS_1|1845_bp
atgactgatgtggatgaccaggaggaaattgcactcctacccgacaacgggagtgaggaa
gactactccttcgccttccgctatgattgtaagcttcctgcagcctccctagaagccaag
cagaacccagtaccatgtttcctgtccagcctgcagaactgtacatacaagcaaggtctc
tgggtcttcagaggcagggaaagaacacctctgactgatgaggactatgaggagggctct
caggaggtggtagactttggcccagtgatgataggggtaaaggaggaaatttactatggt
aaattcccaactctgctcttctttgctaaatccaaggtgttccatgagcaaggcatcctg
ttcggctaccgccatccacagagttctgccactgcctgcatcctcagccttttccaaatg
accaatgagactctcaacatttggactcacttgctgcccttctgggtgagcgggccctct
gtattcatggtggagggtgagtgggcctctgtgctcatggtggagggtgagtgggcctct
gtgctcatggtggagggtgagtgggcctctgtgctcatggtggagggtgagtgggccttt
gtgttcatggtggagggtgagtgggcctttgtgttcatggtggagggtgagtgggccttt
gtgttcatggtggagggtgagtgggcctttgtgttcatggtggagggtgagtgggccttt
gtgttcatggtggagggtgagtgggcctttgtgttcatggtggagggtgagtggccctct
gtgttcatcgtggagggtgagcgggccctctgtattcatggtggagggttctttgcatgg
aggtttgtgactgcactgtatatgacagacatcaagaatgacagctactcctggcccatg
cttgtgtacatgtgcaccagctgcgtgtacccacttgtgtccagctgtgcgcacaccttc
agctctatgtccaagaatgcccggcacatttgctacttcctggactatggtgccgtcaac
ctcttcagcctgggctcagccattgcctactctgcatacacgttcccggatgcgctcatg
tgcaccactttccatgactactacgtggccctggctgtactgaacaccatcctcagcaca
ggcctctcctgctactccaggaaaaaacaggcagacccggctttgcagctggagaggctg
gtccgtttgcccctggggaaacactttatcaggccgagcgaaatgttgtctcaagtcaca
gaaaatccatgctttgggggatggccttcgccagccacagccagatttcttcgcgtgttt
cttgaaatccagaagcccagactctgtaaggtgattcgtgtcctcgcctttgcttatccg
tacacctgggactccctccccatcttctacagggggaaaacaatggatctgataggctct
gcggtgcctgtccagtacccgctattcctgttcccaggggagagtgcacaaaatgaagcc
acctcgtaccaccagaagcacatgatcatgaccctcctggcctctttcttgtactctgca
catctgccagaacgcctagcccctggacgctttgactacatcggtcacagtcaccagctg
tttcacgtgtgtgtgatcctggccacgcacatgcagatggaagccatacttctggacaag
actctgaggaaggaatggctcctggccacctccaagcccttctctttctctcagatagct
ggagccatacttctgtgcatcatcttcagcctcagcaacataatttatttctcagctgct
ctgtatcggattcccaagccagaattacataaaaaagaaacatga

>gi568815583f:69352949_69555504|GENSCAN_predicted_peptide_2|1166_aa
MVAEETEKSGAVWRFGYLVYCRVRPLGFPDQECCIEVINNTTVQLHTPEGYRLNRNGDYK
ETQYSFKQVFGTHTTQKELFDVVANPLVNDLIHGKNGLLFTYGVTGSGKTHTMTGSPGEG
GLLPRCLDMIFNSIGSFQAKRYVFKSNDRNSMDIQCEVDALLERQKREAMPNPKTSSSKR
QVDPEFADMITVQEFCKAEEVDEDSVYGVFVSYIEIYNNYIYDLLEEVPFDPIKPKPPQS
KLLREDKNHNMYVAGCTEVEVKSTEEAFEVFWRGQKKRRIANTHLNRESSRSHSVFNIKL
VQAPLDADGDNVLQEKEQITISQLSLVDLAGSERTNRTRAEGNRLREAGNINQSLMTLRT
CMDVLRENQMYGTNKMVPYRDSKLTHLFKNYFDGEGKVRMIVCVNPKAEDYEENLQVMRF
AEVTQEVEVARPVDKAICGLTPGRRYRNQPRGPVGNEPLVTDVVLQSFPPLPSCEILDIN
DEQTLPRLIEALEKRHNLRQMMIDEFNKQSNAFKALLQEFDNAVLSKENHMQGKLNEKEK
MISGQKLEIERLEKKNKTLEYKIEILEKTTTIYEEDKRNLQQELETQNQKLQRQFSDKRR
LEARLQGMVTETTMKWEKECERRVAAKQLEMQNKLWVKDEKLKQLKAIVTEPKTEKPERP
SRERDREKVTQRSVSPSPVPLSSNYIAQISNGQQLMSQPQLHRRSNSCSSISVASCISEW
EQKIPTYNTPLKVTSIARRRQQEPGQSKTCIVSDRRRGMYWTEGREVVPTFRNEIEIEED
HCGRLLFQPDQNAPPIRLRHRRSRSAGDRWVDHKPASNMQTETVMQPHVPHAITVSVANE
KALAKCEKYMLTHQELASDGEIETKLIKGDIYKTRGGGQSVQFTDIETLKQESPNGSRKR
RSSTVAPAQPDGAESEWTDVETRCSVAVEMRAGSQLGPGYQHHAQPNTASGSASPTLARA
MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI
CNVGAGGPAPAAGAAPAGGPAPSTAAAPAWSMRLVLSPTCISFLNYNDRRVLESTHLPGS
SAQACCMLETCGTAAKCPVWFCDLGTVTSSLWLSVFSSLRCGCQGNWFKNLWHTERRRMK
TLDVIRITNFCASKDTIKKVKDYPTE

>gi568815583f:69352949_69555504|GENSCAN_predicted_CDS_2|3501_bp
atggtggctgaggagacagagaaaagtggagcagtttggaggtttggctacttagtatac
tgtagggtgcgcccactgggctttcctgatcaagagtgttgcatagaagtgatcaataat
acaactgttcagcttcatactcctgagggctacagactcaaccgaaatggagactataag
gagactcagtattcatttaaacaagtatttggcactcacaccacccagaaggaactcttt
gatgttgtggctaatcccttggtcaatgacctcattcatggcaaaaatggtcttcttttt
acatatggtgtgacgggaagtggaaaaactcacacaatgactggttctccaggggaagga
gggctgcttcctcgttgtttggacatgatctttaacagtatagggtcatttcaagctaaa
cgatatgttttcaaatctaatgataggaatagtatggatatacagtgtgaggttgatgcc
ttattagaacgtcagaaaagagaagctatgcccaatccaaagacttcttctagcaaacga
caagtagatccagagtttgcagatatgataactgtacaagaattctgcaaagcagaagag
gttgatgaagatagtgtctatggtgtatttgtctcttatattgaaatatataataattac
atatatgatctattggaagaggtgccgtttgatcccataaaacccaaacctccacaatct
aaattgcttcgtgaagataagaaccataacatgtatgttgcaggatgtacagaagttgaa
gtgaaatctactgaggaggcttttgaagttttctggagaggccagaaaaagagacgtatt
gctaatacccatttgaatcgtgagtccagccgttcccatagcgtgttcaacattaaatta
gttcaggctcccttggatgcagatggagacaatgtcttacaggaaaaagaacaaatcact
ataagtcagttgtccttggtagatcttgctggaagtgaaagaactaaccggaccagagca
gaagggaacagattacgtgaagctggtaatattaatcagtcactaatgacgctaagaaca
tgtatggatgtcctaagagagaaccaaatgtatggaactaacaagatggttccatatcga
gattcaaagttaacccatctgttcaagaactactttgatggggaaggaaaagtgcggatg
atcgtgtgtgtgaaccccaaggctgaagattatgaagaaaacttgcaagtcatgagattt
gcggaagtgactcaagaagttgaagtagcaagacctgtagacaaggcaatatgtggttta
acgcctgggaggagatacagaaaccagcctcgaggtccagttggaaatgaaccattggtt
actgacgtggttttgcagagttttccacctttgccatcatgcgaaattttggatatcaac
gatgagcagacacttccaaggctgattgaagccttagagaaacgacataacttacgacaa
atgatgattgatgagtttaacaaacaatctaatgcttttaaagctttgttacaagaattt
gacaatgctgttttaagtaaagaaaaccacatgcaagggaaactaaatgaaaaggagaag
atgatctcaggacagaaattggaaatagaacgactggaaaagaaaaacaaaactttagaa
tataagattgagattttagagaaaacaactactatctatgaggaagataaacgcaatttg
caacaggaacttgaaactcagaaccagaaacttcagcgacagttttctgacaaacgcaga
ttagaagccaggttgcaaggcatggtgacagaaacgacaatgaagtgggagaaagaatgt
gagcgtagagtggcagccaaacagctggagatgcagaataaactctgggttaaagatgaa
aagctgaaacaactgaaggctattgttaccgaacctaaaactgagaagccagagagaccc
tctcgggagcgagatcgagaaaaagttactcaaagatctgtttctccatcacctgtgcct
ctttctagtaactatattgctcagatttccaacggccagcaactcatgagccagccacag
ctacataggcgctctaactcttgcagcagcatttctgtagcttcctgtatttcggaatgg
gagcagaaaattcctacgtacaacacacctctcaaagtcacatctattgcaaggcgtagg
cagcaggagccaggacaaagcaaaacttgtatcgtgtcagacagaaggcgagggatgtac
tggactgaaggcagggaggtggttcctacattcagaaatgagatagaaatagaagaggat
cattgcggcaggttactctttcaacctgatcagaacgcaccaccaattcgtctccgacac
agacgatcacgctctgcaggagacagatgggtagatcataagcccgcctctaacatgcaa
actgaaacagtcatgcagccacatgtccctcatgccatcacagtatctgttgcaaatgaa
aaggcactagctaagtgtgagaagtacatgctgacccaccaggaactagcctccgatggg
gagattgaaactaaactaattaagggtgatatttataaaacaaggggtggtggacaatct
gttcagtttactgatattgagactttaaagcaagaatcaccaaatggtagtcgaaaacga
agatcttccacagtagcacctgcccaaccagatggtgcagagtctgaatggaccgatgta
gaaacaaggtgttctgtggctgtggagatgagagcaggatcccagctgggacctggatat
cagcatcacgcacaacccaacaccgcgtccggcagcgccagccctacactcgcccgcgcc
atggcctctgtctccgagctcgcctgcatctactcggccctcattctgcacgacgatgag
gtgacagtcacggaggataagatcaatgccctcattaaagcagccggtgtaaatgttgag
cctttttggcctggcttgtttgcaaaggccctggccaacgtcaacattgggagcctcatc
tgcaatgtaggggccggtggacctgctccagcagctggtgctgcaccagcaggaggtcct
gccccctccactgctgctgctccagcatggtccatgcgtctggtcctttctcccacctgc
atcagcttcctcaactataatgaccgtagggttctggagagcacgcaccttccaggctcc
tccgcacaggcctgctgcatgctggagacctgcggcacagctgccaagtgccccgtgtgg
ttctgtgatcttgggacagtcacttcctctctgtggttgtcagtcttctcatccctaagg
tgtggctgccagggcaactggttcaaaaacctgtggcacacagaacgaagaagaatgaag
acactggacgtcatcagaatcacaaacttttgtgcttcaaaggataccatcaagaaagtg
aaagattatcccacagaatag

>gi568815583f:69352949_69555504|GENSCAN_predicted_peptide_3|125_aa
MLYEGEGSLVHCYTPGPQNSTWYMRLAFNEENVTEVKVCDIRGKAIKDIGASALLSRLSD
SGGSQPPRHEDTQTAYGEAHSISNQQPVKRESASSATAFISLRVNAEVLAKVCKELMNSQ
ISWGP

>gi568815583f:69352949_69555504|GENSCAN_predicted_CDS_3|378_bp
atgctctatgagggtgaggggtcattggttcactgctacacccctggcccccagaatagt
acctggtacatgcgactggctttcaatgaagagaatgtaacagaggtgaaagtgtgtgac
attcgaggaaaggccataaaagacattggtgcttcagctttgctctcgcggctgtctgac
tctgggggaagccagccaccacgtcatgaggacacccaaacagcctacggagaggcccac
tctatttccaaccagcagcctgttaaacgtgagagtgcatcatctgcgaccgccttcatc
tcactcagagtaaatgccgaagttctcgccaaggtctgcaaggagctaatgaacagccag
atctcctggggaccttga