GENSCAN 1.0	Date run:  7-Nov-116	Time: 01:02:23

Sequence gi568815583f:69315994_69546942 : 230949 bp : 45.02% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   6682   6886  205  0  1  -85   46   577 0.001  34.97
 1.02 Intr +   9378   9417   40  1  1   96   79    26 0.015  -0.22
 1.03 Intr +  33317  33441  125  2  2   95   37   144 0.578  10.23
 1.04 Intr +  35401  35578  178  2  1   37   28   120 0.222  -0.12
 1.05 Intr +  41117  41214   98  2  2   49   48    88 0.133   0.55
 1.06 Intr +  42007  42182  176  2  2   55   40   108 0.179   2.36
 1.07 Intr +  63890  64017  128  1  2  140   42    86 0.022   8.68
 1.08 Intr +  67662  68024  363  0  0  -29   96   322 0.321  15.60
 1.09 Intr +  68684  68889  206  2  2   72   71   194 0.927  14.94
 1.10 Intr +  73661  73787  127  0  1   95   84   175 0.978  17.54
 1.11 Intr +  75171  75184   14  0  2  121   94     4 0.306  -1.28
 1.12 Intr +  78926  79067  142  0  1  143   86   -14 0.310   3.31
 1.13 Intr +  81475  81571   97  1  1   81   86    88 0.521   7.91
 1.14 Intr +  82465  82512   48  0  0   39  117    33 0.502   0.18
 1.15 Intr +  83981  84122  142  1  1   73  109   113 0.915  11.83
 1.16 Term +  87588  87829  242  1  2  104   41   122 0.984   5.29
 1.17 PlyA +  89625  89630    6                              -0.45

 2.00 Prom +  89638  89677   40                              -4.46
 2.01 Init +  94987  95040   54  0  0   80   33    34 0.255  -1.62
 2.02 Intr + 101390 101518  129  1  0   87   76    86 0.937   8.19
 2.03 Intr + 105654 105759  106  2  1  107   60    72 0.984   6.09
 2.04 Intr + 105999 106135  137  1  2   86   92    20 0.982   2.49
 2.05 Intr + 106333 106442  110  0  2   84  108    53 0.999   5.98
 2.06 Intr + 107166 107336  171  0  0   91  108    88 0.999  10.16
 2.07 Intr + 110077 110189  113  1  2  104   50    63 0.999   4.12
 2.08 Intr + 110343 110464  122  1  2  108  103    55 0.996   9.21
 2.09 Intr + 113118 113220  103  2  1   88  105    47 0.596   6.15
 2.10 Intr + 119490 119569   80  1  2   78  121    23 0.002   3.87
 2.11 Intr + 119659 119778  120  0  0   64   19   117 0.752   3.09
 2.12 Intr + 120145 120268  124  0  1   92   60    16 0.763  -0.64
 2.13 Intr + 120571 120729  159  2  0   49   73   166 0.869  11.16
 2.14 Intr + 122255 122412  158  0  2   96   76   130 0.967  12.33
 2.15 Intr + 123911 124084  174  1  0   48   56   168 0.960   9.74
 2.16 Intr + 124315 124494  180  0  0   39   95   150 0.999  10.86
 2.17 Intr + 124775 125086  312  1  0   96   44    80 0.576   0.78
 2.18 Intr + 128797 129048  252  0  0   79   93   181 0.981  15.33
 2.19 Intr + 130016 130098   83  1  2   91  106     4 0.894   0.94
 2.20 Intr + 130290 130371   82  0  1   68   49    86 0.837   2.34
 2.21 Intr + 130878 130948   71  2  2   90   89    28 0.166   1.08
 2.22 Intr + 136916 137027  112  2  1   22  113   147 0.083  10.98
 2.23 Intr + 137654 137728   75  1  0   43  116    30 0.663   1.01
 2.24 Intr + 139177 139294  118  0  1   62   91    77 0.974   5.44
 2.25 Intr + 141609 141684   76  1  1  107   77    75 0.158   6.87
 2.26 Intr + 146012 146039   28  2  1   74   92    -3 0.100  -3.18
 2.27 Intr + 152291 152400  110  1  2   67  116    71 0.602   6.88
 2.28 Term + 163740 163881  142  0  1   79   43   122 0.651   4.20
 2.29 PlyA + 163912 163917    6                               1.05

 3.00 Prom + 164414 164453   40                              -4.66
 3.01 Init + 170672 170743   72  1  0   65  101    59 0.119   5.97
 3.02 Intr + 209989 210156  168  0  0   12   35   165 0.062   3.74
 3.03 Term + 223526 223663  138  1  0  104   48   150 0.305  10.56
 3.04 PlyA + 225314 225319    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 136956 137027   72  2  0  107  113   114 0.845  16.87
S.002 Term + 139435 139514   80  2  2   83   40   153 0.974   7.93
S.003 Init - 178075 177928  148  1  1   64   82   103 0.851   7.55


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815583f:69315994_69546942|GENSCAN_predicted_peptide_1|776_aa
KKKEKRKKKKKKKKKKKKKKKKKKKKKKKKKKREKKKTRKKKKRKRKKKKKKKKRKKKRN
YFIKKRRWKGTSTHLGLQPGAQPATRRESQQAPEGEAQNVTHEELYYPPQEPNPENMCGD
GYQAAVPDVVTLLEQNNTSSGTWYAATDQANAFFSNPVYKAHQKQLALSWQGQQYTFTVL
PQGYSFAFRYDCKLPAASLEAKQNPVPCFLSSLQNCTYKQGLWVFRGRERTPLTDEDYEE
GSQEVVDFGPVMIGVKEEIYYGKFPTLLFFAKSKVFHEQGILFGYRHPQSSATACILSLF
QMTNETLNIWTHLLPFWVSGPSVFMVEGEWASVLMVEGEWASVLMVEGEWASVLMVEGEW
AFVFMVEGEWAFVFMVEGEWAFVFMVEGEWAFVFMVEGEWAFVFMVEGEWAFVFMVEGEW
PSVFIVEGERALCIHGGGFFAWRFVTALYMTDIKNDSYSWPMLVYMCTSCVYPLVSSCAH
TFSSMSKNARHICYFLDYGAVNLFSLGSAIAYSAYTFPDALMCTTFHDYYVALAVLNTIL
STGLSCYSRKKQADPALQLERLVRLPLGKHFIRPSEMLSQVTENPCFGGWPSPATARFLR
VFLEIQKPRLCKVIRVLAFAYPYTWDSLPIFYRGKTMDLIGSAVPVQYPLFLFPGESAQN
EATSYHQKHMIMTLLASFLYSAHLPERLAPGRFDYIGHSHQLFHVCVILATHMQMEAILL
DKTLRKEWLLATSKPFSFSQIAGAILLCIIFSLSNIIYFSAALYRIPKPELHKKET

>gi568815583f:69315994_69546942|GENSCAN_predicted_CDS_1|2331_bp
aagaagaaggagaagaggaagaagaagaagaagaagaagaagaagaagaagaagaagaag
aagaagaagaagaagaagaagaagaagaagaagaagagggagaagaagaagacgaggaag
aagaagaagaggaagaggaagaagaagaagaagaagaagaagaggaagaagaagaggaat
tatttcatcaagaagagaagatggaagggaacgagcacccacctgggcctgcagccaggt
gcacaacctgcaaccaggcgtgagtcccagcaggcccctgaaggtgaggcccaaaatgtg
acccacgaggagctgtactaccctccacaagaaccaaatccagagaacatgtgtggggat
ggctatcaggctgctgtaccagatgtggttacattgcttgagcaaaataacacatcttct
ggtacctggtatgctgccacggatcaggcaaatgcctttttctccaaccctgtctataaa
gcccaccagaagcaacttgctctcagctggcaaggccaacaatacaccttcaccgtccta
cctcagggctactccttcgccttccgctatgattgtaagcttcctgcagcctccctagaa
gccaagcagaacccagtaccatgtttcctgtccagcctgcagaactgtacatacaagcaa
ggtctctgggtcttcagaggcagggaaagaacacctctgactgatgaggactatgaggag
ggctctcaggaggtggtagactttggcccagtgatgataggggtaaaggaggaaatttac
tatggtaaattcccaactctgctcttctttgctaaatccaaggtgttccatgagcaaggc
atcctgttcggctaccgccatccacagagttctgccactgcctgcatcctcagccttttc
caaatgaccaatgagactctcaacatttggactcacttgctgcccttctgggtgagcggg
ccctctgtattcatggtggagggtgagtgggcctctgtgctcatggtggagggtgagtgg
gcctctgtgctcatggtggagggtgagtgggcctctgtgctcatggtggagggtgagtgg
gcctttgtgttcatggtggagggtgagtgggcctttgtgttcatggtggagggtgagtgg
gcctttgtgttcatggtggagggtgagtgggcctttgtgttcatggtggagggtgagtgg
gcctttgtgttcatggtggagggtgagtgggcctttgtgttcatggtggagggtgagtgg
ccctctgtgttcatcgtggagggtgagcgggccctctgtattcatggtggagggttcttt
gcatggaggtttgtgactgcactgtatatgacagacatcaagaatgacagctactcctgg
cccatgcttgtgtacatgtgcaccagctgcgtgtacccacttgtgtccagctgtgcgcac
accttcagctctatgtccaagaatgcccggcacatttgctacttcctggactatggtgcc
gtcaacctcttcagcctgggctcagccattgcctactctgcatacacgttcccggatgcg
ctcatgtgcaccactttccatgactactacgtggccctggctgtactgaacaccatcctc
agcacaggcctctcctgctactccaggaaaaaacaggcagacccggctttgcagctggag
aggctggtccgtttgcccctggggaaacactttatcaggccgagcgaaatgttgtctcaa
gtcacagaaaatccatgctttgggggatggccttcgccagccacagccagatttcttcgc
gtgtttcttgaaatccagaagcccagactctgtaaggtgattcgtgtcctcgcctttgct
tatccgtacacctgggactccctccccatcttctacagggggaaaacaatggatctgata
ggctctgcggtgcctgtccagtacccgctattcctgttcccaggggagagtgcacaaaat
gaagccacctcgtaccaccagaagcacatgatcatgaccctcctggcctctttcttgtac
tctgcacatctgccagaacgcctagcccctggacgctttgactacatcggtcacagtcac
cagctgtttcacgtgtgtgtgatcctggccacgcacatgcagatggaagccatacttctg
gacaagactctgaggaaggaatggctcctggccacctccaagcccttctctttctctcag
atagctggagccatacttctgtgcatcatcttcagcctcagcaacataatttatttctca
gctgctctgtatcggattcccaagccagaattacataaaaaagaaacatga

>gi568815583f:69315994_69546942|GENSCAN_predicted_peptide_2|1166_aa
MVAEETEKSGAVWRFGYLVYCRVRPLGFPDQECCIEVINNTTVQLHTPEGYRLNRNGDYK
ETQYSFKQVFGTHTTQKELFDVVANPLVNDLIHGKNGLLFTYGVTGSGKTHTMTGSPGEG
GLLPRCLDMIFNSIGSFQAKRYVFKSNDRNSMDIQCEVDALLERQKREAMPNPKTSSSKR
QVDPEFADMITVQEFCKAEEVDEDSVYGVFVSYIEIYNNYIYDLLEEVPFDPIKPKPPQS
KLLREDKNHNMYVAGCTEVEVKSTEEAFEVFWRGQKKRRIANTHLNRESSRSHSVFNIKL
VQAPLDADGDNVLQEKEQITISQLSLVDLAGSERTNRTRAEGNRLREAGNINQSLMTLRT
CMDVLRENQMYGTNKMVPYRDSKLTHLFKNYFDGEGKVRMIVCVNPKAEDYEENLQVMRF
AEVTQEVEVARPVDKAICGLTPGRRYRNQPRGPVGNEPLVTDVVLQSFPPLPSCEILDIN
DEQTLPRLIEALEKRHNLRQMMIDEFNKQSNAFKALLQEFDNAVLSKENHMQGKLNEKEK
MISGQKLEIERLEKKNKTLEYKIEILEKTTTIYEEDKRNLQQELETQNQKLQRQFSDKRR
LEARLQGMVTETTMKWEKECERRVAAKQLEMQNKLWVKDEKLKQLKAIVTEPKTEKPERP
SRERDREKVTQRSVSPSPVPLSSNYIAQISNGQQLMSQPQLHRRSNSCSSISVASCISEW
EQKIPTYNTPLKVTSIARRRQQEPGQSKTCIVSDRRRGMYWTEGREVVPTFRNEIEIEED
HCGRLLFQPDQNAPPIRLRHRRSRSAGDRWVDHKPASNMQTETVMQPHVPHAITVSVANE
KALAKCEKYMLTHQELASDGEIETKLIKGDIYKTRGGGQSVQFTDIETLKQESPNGSRKR
RSSTVAPAQPDGAESEWTDVETRCSVAVEMRAGSQLGPGYQHHAQPNTASGSASPTLARA
MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI
CNVGAGGPAPAAGAAPAGGPAPSTAAAPAWSMRLVLSPTCISFLNYNDRRVLESTHLPGS
SAQACCMLETCGTAAKCPVWFCDLGTVTSSLWLSVFSSLRCGCQGNWFKNLWHTERRRMK
TLDVIRITNFCASKDTIKKVKDYPTE

>gi568815583f:69315994_69546942|GENSCAN_predicted_CDS_2|3501_bp
atggtggctgaggagacagagaaaagtggagcagtttggaggtttggctacttagtatac
tgtagggtgcgcccactgggctttcctgatcaagagtgttgcatagaagtgatcaataat
acaactgttcagcttcatactcctgagggctacagactcaaccgaaatggagactataag
gagactcagtattcatttaaacaagtatttggcactcacaccacccagaaggaactcttt
gatgttgtggctaatcccttggtcaatgacctcattcatggcaaaaatggtcttcttttt
acatatggtgtgacgggaagtggaaaaactcacacaatgactggttctccaggggaagga
gggctgcttcctcgttgtttggacatgatctttaacagtatagggtcatttcaagctaaa
cgatatgttttcaaatctaatgataggaatagtatggatatacagtgtgaggttgatgcc
ttattagaacgtcagaaaagagaagctatgcccaatccaaagacttcttctagcaaacga
caagtagatccagagtttgcagatatgataactgtacaagaattctgcaaagcagaagag
gttgatgaagatagtgtctatggtgtatttgtctcttatattgaaatatataataattac
atatatgatctattggaagaggtgccgtttgatcccataaaacccaaacctccacaatct
aaattgcttcgtgaagataagaaccataacatgtatgttgcaggatgtacagaagttgaa
gtgaaatctactgaggaggcttttgaagttttctggagaggccagaaaaagagacgtatt
gctaatacccatttgaatcgtgagtccagccgttcccatagcgtgttcaacattaaatta
gttcaggctcccttggatgcagatggagacaatgtcttacaggaaaaagaacaaatcact
ataagtcagttgtccttggtagatcttgctggaagtgaaagaactaaccggaccagagca
gaagggaacagattacgtgaagctggtaatattaatcagtcactaatgacgctaagaaca
tgtatggatgtcctaagagagaaccaaatgtatggaactaacaagatggttccatatcga
gattcaaagttaacccatctgttcaagaactactttgatggggaaggaaaagtgcggatg
atcgtgtgtgtgaaccccaaggctgaagattatgaagaaaacttgcaagtcatgagattt
gcggaagtgactcaagaagttgaagtagcaagacctgtagacaaggcaatatgtggttta
acgcctgggaggagatacagaaaccagcctcgaggtccagttggaaatgaaccattggtt
actgacgtggttttgcagagttttccacctttgccatcatgcgaaattttggatatcaac
gatgagcagacacttccaaggctgattgaagccttagagaaacgacataacttacgacaa
atgatgattgatgagtttaacaaacaatctaatgcttttaaagctttgttacaagaattt
gacaatgctgttttaagtaaagaaaaccacatgcaagggaaactaaatgaaaaggagaag
atgatctcaggacagaaattggaaatagaacgactggaaaagaaaaacaaaactttagaa
tataagattgagattttagagaaaacaactactatctatgaggaagataaacgcaatttg
caacaggaacttgaaactcagaaccagaaacttcagcgacagttttctgacaaacgcaga
ttagaagccaggttgcaaggcatggtgacagaaacgacaatgaagtgggagaaagaatgt
gagcgtagagtggcagccaaacagctggagatgcagaataaactctgggttaaagatgaa
aagctgaaacaactgaaggctattgttaccgaacctaaaactgagaagccagagagaccc
tctcgggagcgagatcgagaaaaagttactcaaagatctgtttctccatcacctgtgcct
ctttctagtaactatattgctcagatttccaacggccagcaactcatgagccagccacag
ctacataggcgctctaactcttgcagcagcatttctgtagcttcctgtatttcggaatgg
gagcagaaaattcctacgtacaacacacctctcaaagtcacatctattgcaaggcgtagg
cagcaggagccaggacaaagcaaaacttgtatcgtgtcagacagaaggcgagggatgtac
tggactgaaggcagggaggtggttcctacattcagaaatgagatagaaatagaagaggat
cattgcggcaggttactctttcaacctgatcagaacgcaccaccaattcgtctccgacac
agacgatcacgctctgcaggagacagatgggtagatcataagcccgcctctaacatgcaa
actgaaacagtcatgcagccacatgtccctcatgccatcacagtatctgttgcaaatgaa
aaggcactagctaagtgtgagaagtacatgctgacccaccaggaactagcctccgatggg
gagattgaaactaaactaattaagggtgatatttataaaacaaggggtggtggacaatct
gttcagtttactgatattgagactttaaagcaagaatcaccaaatggtagtcgaaaacga
agatcttccacagtagcacctgcccaaccagatggtgcagagtctgaatggaccgatgta
gaaacaaggtgttctgtggctgtggagatgagagcaggatcccagctgggacctggatat
cagcatcacgcacaacccaacaccgcgtccggcagcgccagccctacactcgcccgcgcc
atggcctctgtctccgagctcgcctgcatctactcggccctcattctgcacgacgatgag
gtgacagtcacggaggataagatcaatgccctcattaaagcagccggtgtaaatgttgag
cctttttggcctggcttgtttgcaaaggccctggccaacgtcaacattgggagcctcatc
tgcaatgtaggggccggtggacctgctccagcagctggtgctgcaccagcaggaggtcct
gccccctccactgctgctgctccagcatggtccatgcgtctggtcctttctcccacctgc
atcagcttcctcaactataatgaccgtagggttctggagagcacgcaccttccaggctcc
tccgcacaggcctgctgcatgctggagacctgcggcacagctgccaagtgccccgtgtgg
ttctgtgatcttgggacagtcacttcctctctgtggttgtcagtcttctcatccctaagg
tgtggctgccagggcaactggttcaaaaacctgtggcacacagaacgaagaagaatgaag
acactggacgtcatcagaatcacaaacttttgtgcttcaaaggataccatcaagaaagtg
aaagattatcccacagaatag

>gi568815583f:69315994_69546942|GENSCAN_predicted_peptide_3|125_aa
MLYEGEGSLVHCYTPGPQNSTWYMRLAFNEENVTEVKVCDIRGKAIKDIGASALLSRLSD
SGGSQPPRHEDTQTAYGEAHSISNQQPVKRESASSATAFISLRVNAEVLAKVCKELMNSQ
ISWGP

>gi568815583f:69315994_69546942|GENSCAN_predicted_CDS_3|378_bp
atgctctatgagggtgaggggtcattggttcactgctacacccctggcccccagaatagt
acctggtacatgcgactggctttcaatgaagagaatgtaacagaggtgaaagtgtgtgac
attcgaggaaaggccataaaagacattggtgcttcagctttgctctcgcggctgtctgac
tctgggggaagccagccaccacgtcatgaggacacccaaacagcctacggagaggcccac
tctatttccaaccagcagcctgttaaacgtgagagtgcatcatctgcgaccgccttcatc
tcactcagagtaaatgccgaagttctcgccaaggtctgcaaggagctaatgaacagccag
atctcctggggaccttga