GENSCAN 1.0	Date run:  7-Nov-116	Time: 21:22:07

Sequence gi568815583f:64492979_64693323 : 200345 bp : 42.71% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   6442   7188  747  0  0   51  116   716 0.960  65.46
 1.02 Intr +   8019   8121  103  2  1   17   77    94 0.321   0.03
 1.03 Term +  11260  11330   71  2  2  113   47    -2 0.052  -4.68
 1.04 PlyA +  12104  12109    6                               1.05

 2.05 PlyA -  13177  13172    6                               1.05
 2.04 Term -  14557  14275  283  0  1   46   33   154 0.080  -0.39
 2.03 Intr -  35833  35693  141  0  0   32   46   154 0.093   4.15
 2.02 Intr -  36219  35917  303  2  0    7   36   310 0.544  12.48
 2.01 Init -  36635  36430  206  2  2   91   16   235 0.777  14.97
 2.00 Prom -  44750  44711   40                              -4.95

 3.02 PlyA -  45437  45432    6                               1.05
 3.01 Sngl -  51939  51658  282  0  0   79   49   148 0.809   5.24
 3.00 Prom -  83909  83870   40                              -3.95

 4.00 Prom +  98506  98545   40                              -5.65
 4.01 Init + 100001 100344  344  1  2   75   75   376 0.485  31.75
 4.02 Term + 125538 125847  310  0  1   17   43   245 0.025   6.45
 4.03 PlyA + 126656 126661    6                               1.05

 5.00 Prom + 129284 129323   40                              -4.75
 5.01 Init + 129849 130074  226  2  1   62  115   285 0.891  27.28
 5.02 Intr + 133272 133303   32  1  2   88   47    21 0.424  -5.07
 5.03 Intr + 133530 133654  125  2  2   71   80   120 0.621   7.96
 5.04 Intr + 143317 143371   55  1  1   76   81    38 0.435  -0.04
 5.05 Intr + 147728 147853  126  1  0   72   37    94 0.200   2.66
 5.06 Intr + 176055 176265  211  2  1   59   66   102 0.285   2.66
 5.07 Intr + 177368 177455   88  0  1   96  121    26 0.969   4.81
 5.08 Intr + 180938 183278 2341  2  1   54   93  2554 0.976 238.88
 5.09 Intr + 185138 185504  367  1  1   49   92   557 0.902  45.99
 5.10 Intr + 186770 186853   84  0  0   42   94    63 0.657   1.17
 5.11 Intr + 187207 187382  176  2  2  137  107   147 0.999  20.24
 5.12 Intr + 187668 187761   94  2  1  104   18    73 0.626   0.52
 5.13 Intr + 187803 187884   82  1  1   90  115    21 0.891   2.78
 5.14 Intr + 188331 188409   79  0  1   88  115   -18 0.630  -0.47
 5.15 Term + 188714 188842  129  1  0  112   49   177 0.949  13.40
 5.16 PlyA + 192261 192266    6                               1.05

 6.04 PlyA - 193059 193054    6                               1.05
 6.03 Term - 195856 195726  131  2  2  108   38   148 0.882   9.16
 6.02 Intr - 196191 196106   86  2  2  115   78    83 0.828   8.54
 6.01 Intr - 197571 197396  176  0  2  115   65   163 0.999  14.52

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  35833  35689  145  0  1   32   47   162 0.836   2.90


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815583f:64492979_64693323|GENSCAN_predicted_peptide_1|306_aa
MSLSSGASGGKGVDANPVETYDSGDEWDIGVGNLIIDLDADLEKDQQKLEMSGSKEVGIP
APNAVATLPDNIKFVTPVPGPQGKEGKSKSKRSKSGKDTSKPTPGTSLFTPSEGAASKKE
VQGRSGDGANAGGLVAAIAPKGSEKAAKASRSVAGSKKEKENSSSKSKKERSEGVGTCSE
KDPGVLQPVPLGGRGGQYDGSAGVDTGAVEPLGSIAIEPGAALNPLGTKPEPEEGENECR
LLKKVKSEKEMELAGLEENGCESRVSSGSIKLQQLIPAKQWPCGVVIQGSSRERLSCPIS
SFYRRN

>gi568815583f:64492979_64693323|GENSCAN_predicted_CDS_1|921_bp
atgtccttgagcagtggagcctccggagggaaaggagtggatgcaaacccggttgagaca
tacgacagtggggatgaatgggacattggagtagggaatctcatcattgacctggacgcc
gatctggaaaaggaccagcagaaactggaaatgtcaggctcaaaggaggtggggataccg
gctcccaatgctgtggccacactaccagacaacatcaagtttgtgaccccagtgccaggt
cctcaagggaaggaaggcaaatcaaaatccaaaaggagtaagagtggcaaagacactagc
aaacccactccagggacttccctgttcactccaagtgagggggcagctagcaagaaagag
gtgcaggggcgctcaggagatggtgccaatgctggaggcctggttgctgctattgctccc
aagggctcagagaaggcggctaaggcatcccgcagtgtagccggttccaaaaaggagaag
gagaacagctcatctaagagcaagaaggagagaagcgaaggagtggggacttgttcagaa
aaggatcctggggtcctccagccagttcccttgggaggacggggtggtcagtatgatgga
agtgcaggggtggatacaggagctgtggagccacttgggagtatagctattgagcctggg
gcagcgctcaatcctttgggaactaaaccggagccagaggaaggggagaatgagtgtcgc
ctgctaaagaaagtcaagtctgaaaaggaaatggaacttgcagggctggaggagaatggg
tgtgagtctagggtcagctcaggcagcattaaacttcagcagcttattcctgcaaaacag
tggccttgtggtgttgtaattcaaggcagttccagagaaagattatcttgtccaatttcc
tcattttatagaagaaactaa

>gi568815583f:64492979_64693323|GENSCAN_predicted_peptide_2|310_aa
MTAFNSGKVDIVAINDPFIDLNYMVYMFLYDSTHGKFHGTVKAENGTLVINGNPITHFPG
PRSLQNQMGAPAKVIHDNFGIIEGFMTTVHTITATQTINGPSGKLSRDGCRALQDIIPVS
TGAAKPVGKVIPELNGKLTGMAFHVPTANVSVADLTCRLEKPANMMTSRSNTHSSTFDAG
AAIVLKDHSVKLISWYDNEFGYSNRVVHLMAHNASKESGDDKEMNSVISKASEHSPVSSS
GGGLLKHGLKSENHRERAQTASSGRISAVYVTATSQALLPPWMSSAGKSSYTQMAKIQVH
TGGGRLRAKT

>gi568815583f:64492979_64693323|GENSCAN_predicted_CDS_2|933_bp
atgactgcttttaactctggtaaagtggatattgttgccatcaatgaccccttcattgac
ctcaactacatggtctacatgttcctgtatgattctacacatggcaaattccatggcacc
gtcaaggctgagaacgggacgcttgtcatcaatggaaaccccatcacccattttccagga
ccaagatccctccaaaatcaaatgggcgccccagccaaggtcatccatgacaactttggt
atcatagaaggattcatgaccacagttcacaccatcactgccacccagactataaatggc
ccctccgggaaactgtcacgtgatggctgcagggctctccaggacatcatccctgtctct
actggcgctgccaagcctgtgggtaaggtcatccctgagctgaacgggaagctcactggc
atggccttccatgtccccactgccaatgtgtcagtggcggacctgacctgtcgtctggaa
aaacctgccaatatgatgacatcaagaagcaacacccactcttctaccttcgatgctggg
gcagccattgtcctcaaggaccactctgtcaagctaatttcctggtatgacaatgaattt
ggctacagcaacagggtggtgcacctcatggcccacaatgcctccaaggagtcaggggat
gataaggaaatgaacagtgtaatttccaaggcctctgaacacagccctgtcagcagctct
ggaggcgggttactcaagcatggcttgaagagtgaaaaccacagagagagggctcagaca
gccagcagtggcaggatctcagctgtgtatgttactgccacatcccaagccctgctgcct
ccctggatgagctctgctggtaaaagctcttatacccaaatggcaaaaatacaagttcac
actgggggaggaagattaagggctaagacttag

>gi568815583f:64492979_64693323|GENSCAN_predicted_peptide_3|93_aa
MQHNTYLQLDGLTAEEKALTWNPETENQTPFNNQCTCPVFLAHGFHARLVKRGSLADSLE
ELREGMSPGFPVERTLDSLTVTAGFGKAFQIRL

>gi568815583f:64492979_64693323|GENSCAN_predicted_CDS_3|282_bp
atgcagcacaacacctacctacaacttgatggtctgacagcagaggagaaagcactgact
tggaatccagagactgaaaaccaaacgccctttaacaatcaatgtacctgccctgtattc
ctggctcatggctttcatgctagattggtaaaaaggggttcgcttgctgacagcttagag
gagttaagagaagggatgagtcctggttttcctgttgaaagaactctggacagcctgaca
gtcactgctggctttggaaaggcatttcagataaggctgtag

>gi568815583f:64492979_64693323|GENSCAN_predicted_peptide_4|217_aa
MTKKRRNNGRAKKGRGHMQPIRCTNCARCVPKDKAIKKFVIRNIVESAAVRDISEASVFD
AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFRPAGAAPRPPPKPMFLSWC
TGRIGSNVGLENECKVLLSESNAQQIGEPEGRWFSPGVQLLSGPGSSPNAPAKLCFVPRP
AGICHVLFRHVCSSAGMLLSTPSRGPAAVSSSANVFL

>gi568815583f:64492979_64693323|GENSCAN_predicted_CDS_4|654_bp
atgacaaagaaaagaaggaacaatggtcgtgccaaaaagggccgcggccacatgcagcct
attcgctgcactaactgtgcccgatgcgtgcccaaagacaaggccattaagaaattcgtc
attcgaaacatagtggagtccgcagcagtcagggacatttctgaagcgagcgtcttcgat
gcctatgtgcttcccaagctgtatgtgaagctgcattactgtgtgagttgtgcaattcac
agcaaagtagtcaggaatcgatctcgtgaagcccgcaaggaccgaacacccccaccccga
tttagacctgcgggtgctgccccacgtcccccaccaaagcccatgttcttgtcttggtgt
actggaagaattggatcaaatgtgggcttggagaatgagtgtaaggttttattgagtgaa
agtaatgctcagcagattggggagccagaagggagatggttttcccctggagttcagcta
ctcagcggcccaggctcttctccaaatgccccagccaaactctgcttcgttccacggcct
gctggcatttgtcatgtgctcttccgccacgtgtgctcttctgccggcatgctcctctca
acgccctctcgaggtccagccgctgtgtcttcttctgccaatgtgttcctctag

>gi568815583f:64492979_64693323|GENSCAN_predicted_peptide_5|1404_aa
MESPVSTPAVLPIHLLVPVVNNDISSPCEQIMVRTRSVGVNTCDVALATEPECLGPCEPG
TSVNLEGIVWQETEDEGLHLNCQLAKQTTLSSNRKVLTAQREAVNAWPLRGMEDTEVPVE
LSHLAENSCCLHGLLHSNKLYDKKAMWFSEDSSCIAKGMMTFAEPPSPAMAAGYGYLSKR
KGRIYDLRIGKEQNENIMLPKEKGKRYSWATINGYMNEYVLFEAIWRWFGRICENSKYKC
TVINSFTYRNSSYRHICVGMLVVNVTWRNKTYVGTLLDCTRHDWAPPRFCDSPTSDLEMR
NGRGRGKRMRPNSNTPVNETATASDSKGTSNSSKTRAGANSKGRRGSQNSSEHRPPASST
SEDVKASPSSANKRKNKPLSDMELNSSSEDSKGSKRVRTNSMGSATGPLPGTKVEPTVLD
RNCPSPVLIDCPHPNCNKKYKHINGLKYHQAHAHTDDDSKPEADGDSEYGEEPILHADLG
SCNGASVSQKGSLSPARSATPKVRLVEPHSPSPSSKFSTKGLCKKKLSGEGDTDLGALSN
DGSDDGPSVMDETSNDAFDSLERKCMEKEKCKKPSSLKPEKIPSKSLKSARPIAPAIPPQ
QIYTFQTATFTAASPGSSSGLTATVAQAMPNSPQLKPIQPKPTVMGEPFTVNPALTPAKD
KKKKDKKKKESSKELESPLTPGKVCRAEEGKSPFRESSGDGMKMEGLLNGSSDPHQSRLA
SIKAEADKIYSFTDNAPSPSIGGSSRLENTTPTQPLTPLHVVTQNGAEASSVKTNSPAYS
DISDAGEDGEGKVDSVKSKDAEQLVKEGAKKTLFPPQPQSKDSPYYQGFESYYSPSYAQS
SPGALNPSSQAGVESQALKTKRDEEPESIEGKVKNDICEEKKPELSSSSQQPSVIQQRPN
MYMQSLYYNQYAYVPPYGYSDQSYHTHLLSTNTAYRQQYEEQQKRQSLEQQQRGVDKKAE
MGLKEREAALKEEWKQKPSIPPTLTKAPSLTDLVKSGPGKAKEPGADPAKSVIIPKLDDS
SKLPGQAPEGLKVKLSDASHLSKEASEAKTGAECGRQAEMDPILWYRQEAEPRMWTYVYP
AKYSDIKSEDERWKEERDRKLKEERSRSKDSVPKEDGKESTSSDCKLPTSEESRLGSKEP
RPSVHVPVSSPLTQHQSYIPYMHGYSYSQSYDPNHPSYRSMPAVMMQNYPVISIDIFIFD
DEETEAQNSYLFAQGYQASSYLPSSYSFSPYGSKVSGGEDADKARASPSVTCKSSSESKA
LDILQQHASHYKSKSPTISDKTSQERDRGGCGVVGGGGSCSSVGGASGAPDVHTPPPPPL
GVLIAPSTVQLTLCSRAFFYSHCCQPTRLNSLTLPTPQEVRMTPSARIKSASRARTGLPK
EVLKVPFRHQLNGVDHPVCRFHHD

>gi568815583f:64492979_64693323|GENSCAN_predicted_CDS_5|4215_bp
atggagtcccctgtttccacaccagcagtgctgccaatacaccttttggtgccagtggtc
aacaatgacatctcatctccctgtgagcagatcatggttcgtacccgatcagttggggtc
aacacatgtgatgtggctctggccacagagcctgagtgcttgggcccctgtgaacctgga
actagcgtcaaccttgaaggcatcgtgtggcaggaaacagaagatgagggccttcacctg
aactgtcagttggcgaagcaaactacactgtcttcaaacagaaaagtccttacagctcag
agagaagctgtgaatgcttggcctctgaggggaatggaggacactgaggtccctgtagaa
ctgagccaccttgctgagaacagttgctgccttcacggccttctccatagcaacaagcta
tatgacaaaaaggctatgtggttttcagaggactccagctgtatagccaaaggcatgatg
acctttgctgagccaccttctccagccatggctgcaggatatggttacctcagcaagagg
aaaggaaggatatacgatttaaggattggcaaagaacaaaatgagaacatcatgttgcca
aaggaaaagggcaagaggtattcatgggctactataaatgggtatatgaatgagtatgtc
ctctttgaggcaatttggaggtggtttggccgtatttgtgagaactccaaatacaagtgc
actgtgattaacagttttacttacaggaattcatcttacagacatatttgtgtagggatg
ttggtggtaaatgtaacgtggaggaacaagacatatgtaggtacactccttgactgcaca
cgacatgattgggcacccccaaggttctgtgactccccgaccagtgacctggaaatgcgc
aatggccggggtagaggcaaacgcatgcgtcccaacagtaatacacctgtcaatgagaca
gccacagcctctgacagcaaagggaccagtaacagcagcaaaacccgggcaggagccaat
agcaaaggccgtcggggcagccagaattcttcagagcaccgcccacctgccagcagcact
tctgaggatgtcaaggccagcccttcctcagctaataagcggaaaaacaaacccctttca
gacatggagctgaattctagctcagaggactccaaagggagcaagcgtgtccgtactaat
tccatgggctcagccactggcccccttcctgggacaaaggtagaacccactgttctggac
agaaactgcccctcccccgtcctaattgactgtccccacccaaactgcaacaagaagtac
aagcacatcaatggacttaagtaccaccaagctcatgcccatacagatgatgacagcaag
ccggaagcggatggggacagtgagtacggagaggaacctattctccatgcagatcttggg
agctgcaacggtgcatctgtctcacaaaaaggttccttgtcccctgcccgctcagctacc
cccaaagttcgacttgtagagccccatagcccttctccttcaagcaaattcagcacaaaa
ggcctctgtaagaaaaagttgagtggggaaggggacacagaccttggggccttatccaat
gatggctctgatgatggaccctcagtgatggatgaaacaagcaatgatgcctttgattct
ttagaaaggaagtgtatggaaaaagaaaaatgtaaaaaaccctctagtttaaaacctgaa
aagattccttccaagagcctaaagtcagcccgtcccattgcccctgccatccccccacag
caaatctacaccttccagacagccaccttcacagcagcgagcccaggctcttcctcaggc
ttgaccgccacagtggcacaagccatgcccaacagtccccaactcaagcccattcagccc
aagcccactgttatgggagaacctttcacagtcaaccctgccttgactccagccaaggac
aagaaaaagaaagacaaaaaaaagaaggaatcttcaaaggaacttgaaagtcctctgacc
cctgggaaggtgtgtcgagcagaggaaggcaaaagcccattcagggaatcttcaggagat
gggatgaaaatggaggggctcctaaatggctcatcagacccccaccaaagccgactggct
agcatcaaggctgaagccgacaagatctacagtttcacggacaatgcccccagcccttcc
attggaggcagtagccgccttgaaaacactacccctactcagcccctgactcccttacat
gtggtgacccagaatggagctgaagccagctcagtcaaaaccaacagccctgcatactct
gacatctctgatgctggggaggatggggagggcaaggtagacagtgtcaaatcaaaggac
gccgaacagttggttaaagaaggggctaagaaaactctttttccccctcagcctcagagc
aaagactcaccatattaccaaggctttgagagttactattctccaagttatgcacagtcc
agccctggggctctgaaccccagcagccaggcaggagtggagagccaggccctgaagaca
aaaagggatgaggaacctgagagcatagaagggaaagtgaagaacgatatctgtgaagaa
aagaagcccgagctgagcagttccagtcagcagccctcggtcatccagcagcgtcccaat
atgtacatgcagtccctgtactacaaccagtatgcctatgtacccccctatggctacagc
gaccagagttaccacacccaccttctgagcactaacacggcttaccggcagcagtacgaa
gaacagcagaaacgccagagcttagagcagcagcagcggggagtggacaagaaggcagag
atgggcctgaaggagcgggaggcagcactcaaggaagagtggaagcaaaagccgtcaatt
ccaccaactctcaccaaggcccccagcctgacagacctggtgaaatcaggacctggcaag
gccaaggagccaggggctgacccagccaaatcagtcatcattcccaagttagatgactct
tcaaaactcccgggccaggcccctgaaggccttaaagtgaagctgagtgatgccagccac
ctaagcaaggaggcctctgaggccaagacaggtgctgagtgtggtcgacaggcagagatg
gatccaatactctggtaccgacaggaggcagagccccggatgtggacatatgtttatcct
gccaagtactcagacatcaagtcagaggatgagcggtggaaggaggagcgggaccgcaaa
ttgaaggaggaaaggagtcggagtaaggactctgtccccaaggaagatgggaaggaaagc
acaagtagtgactgcaagctgcccacgtcagaggagtctcgccttgggagcaaggagccc
cggccaagtgtccatgtgcctgtgtcctccccacttacccagcaccagtcctacatcccc
tacatgcacggctattcctacagtcagtcctacgaccccaaccaccccagctaccggagc
atgcctgctgtgatgatgcagaactacccagtaataagtattgatatcttcatttttgat
gatgaagaaactgaagctcaaaacagttatttatttgctcaaggttaccaagctagttcc
tacctgccttccagctactctttttccccatatggcagcaaggtctcaggtggtgaagat
gctgacaaggcacgagccagccccagtgtgacttgtaaatccagctcagagtccaaagcc
ctggacatcttgcagcagcatgccagtcactacaagagcaagtctcccacgataagtgat
aaaacttctcaggagagagatcgaggaggctgtggggtggttgggggtggtggcagctgt
agcagcgtcgggggagcaagtggggcgcctgatgtccacacaccaccaccaccaccactt
ggggtactcattgctcccagcacagtacaacttaccctatgcagcagggctttcttctac
agccattgttgccagccaacaaggctcaactccctcactctacccaccccccaggaggtg
agaatgacaccaagtgcccggataaagtcagcttcacgggcccggactggcttacccaag
gaggtgctgaaggtgccgtttagacatcagttaaatggtgttgatcatcctgtttgccgt
ttccaccatgactga

>gi568815583f:64492979_64693323|GENSCAN_predicted_peptide_6|130_aa
DEKLTVTQDLPVNDGKPHIVHFQYEVTEVKVSSWDAVLSSQSLFVEIPDGLLADGSKEGL
LALLEFAEEKMKVNYVFICFRKGREDRAPLLKTFSFLGFEIVRPGHPCVPSRPDVMFMVY
PLDQNLSDED

>gi568815583f:64492979_64693323|GENSCAN_predicted_CDS_6|393_bp
gacgagaagctcactgtgacccaggacctccctgtgaatgatggaaaacctcacatcgtc
cacttccagtatgaggtcaccgaggtgaaggtctcttcttgggatgcagtcctgtccagc
cagagcctgtttgtagaaatcccagatggattattagctgatgggagcaaagaaggattg
ttagcactgctagagtttgctgaagagaagatgaaagtgaactatgtcttcatctgcttc
aggaagggccgagaagacagagctccactcctgaagaccttcagcttcttgggctttgag
attgtacgtccaggccatccctgtgtcccctctcggccagatgtgatgttcatggtttat
cccctggaccagaacttgtccgatgaggactaa