GENSCAN 1.0	Date run:  5-Nov-116	Time: 18:46:08

Sequence gi568815582r:74574960_74795757 : 220798 bp : 46.21% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -    783    778    6                               1.05
 1.02 Term -   8875   8756  120  1  0   60   44    71 0.051  -1.63
 1.01 Init -  32135  31698  438  2  0   95   78   451 0.803  38.92
 1.00 Prom -  46690  46651   40                              -4.16

 2.12 PlyA -  47971  47966    6                               1.05
 2.11 Term -  49112  48969  144  2  0  129   42   152 0.986  12.61
 2.10 Intr -  51595  51384  212  2  2   93   93   138 0.979  13.43
 2.09 Intr -  53707  53493  215  0  2   72  119     3 0.571   0.16
 2.08 Intr -  55998  55822  177  2  0   62   91   100 0.980   6.73
 2.07 Intr -  57714  57564  151  1  1  104  109    95 0.998  12.42
 2.06 Intr -  61618  61387  232  1  1   67  103    53 0.532   2.05
 2.05 Intr -  63011  62897  115  1  1   98   98    39 0.877   6.35
 2.04 Intr -  69494  69403   92  2  2   65  100   113 0.999   8.99
 2.03 Intr -  69776  69582  195  2  0   72  110   130 0.854  13.21
 2.02 Intr -  77163  76944  220  2  1   86   36    95 0.236   2.40
 2.01 Init -  86490  85973  518  0  2   68   99   192 0.427  12.66
 2.00 Prom -  87323  87284   40                              -3.06

 3.00 Prom +  88605  88644   40                              -7.66
 3.01 Init +  90650  90704   55  1  1   59   59    70 0.307   0.65
 3.02 Term +  92545  92810  266  2  2   17   33   245 0.969   7.57
 3.03 PlyA +  93860  93865    6                               1.05

 4.12 PlyA -  93915  93910    6                               1.05
 4.11 Term -  97997  97966   32  0  2   79   48    38 0.397  -3.08
 4.10 Intr - 100141 100001  141  2  0   62   54   253 0.574  19.62
 4.09 Intr - 101711 101576  136  2  1   92   58   -16 0.278  -4.06
 4.08 Intr - 104021 103940   82  1  1   61  113    44 0.142   3.84
 4.07 Intr - 107827 107692  136  2  1   69  111    52 0.368   5.23
 4.06 Intr - 110624 110527   98  1  2   92  110    87 0.948  10.95
 4.05 Intr - 116509 116318  192  0  0  -22   85   145 0.308   1.81
 4.04 Intr - 120762 120323  440  0  2   27   36   439 0.097  24.91
 4.03 Intr - 121173 121093   81  0  0   75   42   108 0.203   4.73
 4.02 Intr - 125723 125494  230  0  2   53  105    73 0.230   3.09
 4.01 Init - 133580 133520   61  2  1   76   69    75 0.486   5.81
 4.00 Prom - 136141 136102   40                              -6.76

 5.11 PlyA - 136207 136202    6                               1.05
 5.10 Term - 139046 138916  131  0  2   58   49   128 0.932   4.24
 5.09 Intr - 141640 141388  253  1  1  104   94   430 0.743  42.21
 5.08 Intr - 144201 144029  173  1  2   96  105   316 0.991  33.76
 5.07 Intr - 151372 151266  107  0  2   94   95   146 0.861  15.76
 5.06 Intr - 152427 152285  143  0  2   97   93   175 0.977  18.05
 5.05 Intr - 154938 154752  187  2  1   81  -10   147 0.083   3.89
 5.04 Intr - 162338 162328   11  2  2  113   94     6 0.036  -3.24
 5.03 Intr - 165156 165064   93  0  0  120   77    83 0.087  10.56
 5.02 Intr - 193094 192999   96  2  0   44   49    91 0.254   1.01
 5.01 Init - 199796 199527  270  2  0  103   92   490 0.993  45.87
 5.00 Prom - 204177 204138   40                              -3.16


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 153715 153650   66  1  0   66   37    95 0.829   3.27
S.002 Intr + 174423 174542  120  1  0  103   89    92 0.979  11.27


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815582r:74574960_74795757|GENSCAN_predicted_peptide_1|185_aa
MAACGRVRRMFRLSAALHLLLLFAAGAEKLPGQGVHSQGQGPGANFVSFVGQAGGGGPAG
QQLPQLPQSSQLQQQQQQQQQQQQPQPPQPPFPAGGPPARRGGAGAGGGWKLAEEESCRE
DVTRVCPKHTWSNNLAVLECLQDVRETWSSGGRSHGESFEREMLGHWLIGVWICLPEKMM
IELKE

>gi568815582r:74574960_74795757|GENSCAN_predicted_CDS_1|558_bp
atggcggcgtgtggacgtgtacggaggatgttccgcttgtcggcggcgctgcatctgctg
ctgctattcgcggccggggccgagaaactccccggccagggcgtccacagccagggccag
ggtcccggggccaactttgtgtccttcgtagggcaggccggaggcggcggcccggcgggt
cagcagctgccccagctgcctcagtcatcgcagcttcagcagcaacagcagcagcagcaa
cagcaacagcagcctcagccgccgcagccgcctttcccggcgggtgggcctccggcccgg
cggggaggagcgggggctggtgggggctggaagctggcggaggaagagtcctgcagggag
gacgtgacccgcgtgtgccctaagcacacctggagcaacaacctggcggtgctcgagtgc
ctgcaggatgtgagggagacatggtcgagtggaggacgtagccatggtgagagctttgaa
agagagatgcttggacattggctaattggagtctggatatgtctccctgagaagatgatg
attgagctgaaggaatga

>gi568815582r:74574960_74795757|GENSCAN_predicted_peptide_2|756_aa
MAHEAMEYDVQVQLNHAEQQPAPAGMASSQGGPALLQPVPADVVSSQGVPSILQPAPAEV
ISSQATPPLLQPAPQLSVDLTEVEVLGEDTVENINPRTSEQHRQGSDGNHTIPASSLHSM
TNFISGLQRLHGMLEFLRPSSSNHSVGPMRTRRRVSASRRARAGGSQRTDSARLRAPLDA
YFQVSRTQPDLPATTYDSETRNPVSEELQVSSSSDSDSDSSAEYGGVVDQAEESGAVILE
GQYFTQPSPQKSEPLLPSASMDEEEGDTCTICLEQWTNAGDHRLSALRCGHLFGYRCIST
WLKGQVRKCPQCNKKARHSDIVVLYARTLRALDTSEQERMKSSLLKEQMLRKQAELESAQ
CRLQLQVLTDKCTRLQRRVQDLQKLTSHQSQNLQQPRGSQAWVLSCSPSSQGQHKHKYHF
QKTFTVSQAGNCRIMAYCDALSCLVISQPSPQASFLPGFGVKMLSTANMKSSQYIPMHGK
QIRGLAFSSYLRGLLLSASLDNTIKLTSLETNTVVQTYNAGRPVWSCCWCLDEANYIYAG
LANGSILVYDVRNTSSHVQELVAQKARCPLVSLSYMPRAASAAFPYGGVLAGTLEDASFW
EQKMDFSHWPHVLPLEPGGCIDFQTENSSRHCLVTYRPDKNHTTIRSVLMEMSYRLDDTG
NPICSCQPVHTFFGGPTCKLLTKNAIFQSPENDGNILVCTGDEAANSALLWDAASGSLLQ
DLQTDQPVLDICPFEVNRNSYLATLTEKMVHIYKWE

>gi568815582r:74574960_74795757|GENSCAN_predicted_CDS_2|2271_bp
atggctcatgaagcaatggaatatgatgttcaggtgcagttaaatcatgccgaacaacag
ccagctcctgctggcatggccagcagccaagggggaccagccctcctccagcctgttcct
gctgatgtggtcagcagccagggggtaccatccatcctccagccagctcctgctgaggtg
atcagcagccaagcgacaccacccctgctccagcctgctccgcaactgtctgttgacctg
acagaagtggaggtcttgggagaagacactgtggagaacatcaatccaagaacttcagaa
caacataggcagggatctgatggtaatcacaccatcccagcatcttcgttgcattcaatg
accaacttcatcagcggactgcagagacttcatggcatgctggaattcctgagaccttca
tcttcaaaccacagtgtagggccaatgagaacaagaaggagggtatctgcttcacggagg
gcaagagccggagggtctcagaggacagacagtgccaggttgagagcaccattggatgct
tactttcaggtgagcaggacccagcctgacttgccagctaccacttatgattcagagact
aggaatcctgtatctgaagagttgcaggtgtctagtagttctgattctgacagtgacagc
tctgcagagtatggaggggttgttgaccaggcagaggaatctggagctgtcattttagaa
ggtcagtattttacccagccatctccccagaagtctgagcctctgctaccttctgcttct
atggatgaggaagaaggggacacttgtacaatatgtctggaacagtggaccaatgctggg
gaccaccggctctcagcattacgctgtgggcatctctttgggtataggtgcatttccacg
tggcttaaaggacaagtacgaaaatgtccccagtgcaacaagaaagccaggcacagtgac
attgtcgtcctttatgcccgaaccctgagagctttggacactagtgaacaggagcgcatg
aaaagttccctactgaaggaacagatgctaaggaaacaggccgagttagaatcagcacag
tgccgactccaactgcaggtcctcactgataagtgcactaggcttcaaaggcgtgttcag
gacttgcaaaaacttacgtcacatcaaagtcagaatttacagcaacccaggggctcccaa
gcatgggtcctgagctgctcaccctccagccagggccagcacaagcacaagtaccacttc
caaaagaccttcacagtatctcaggcaggaaactgccggatcatggcatactgtgatgct
ctgagctgcctggtgatatcacagccttctcctcaggcctcttttcttccaggctttggt
gttaagatgttgagtactgccaacatgaagagcagtcagtacattccgatgcatggcaaa
cagatccgtggactggcgtttagcagttacctcagaggcttgctactctctgcttcccta
gacaacactattaaactgaccagcctggagacaaataccgtggtccagacttataatgct
ggacgtcctgtctggagctgttgctggtgtcttgatgaggctaactacatctatgctgga
ctggccaatggttcaattctggtatatgacgtgcgaaacacgagcagtcatgtgcaggag
ttagtagctcagaaagccagatgcccactggtctccctgtcatacatgcccagagctgcc
tcagctgcatttccatatggtggggtgctggctggaaccttggaggatgcttcattctgg
gaacagaaaatggacttttctcattggcctcatgtgctgcccttggagccagggggctgc
atagactttcagacagagaacagctcccggcactgtcttgtgacctacaggcctgataaa
aatcacaccaccatacgaagtgtgctgatggaaatgtcctaccgactggatgacactgga
aatccaatctgctcctgccagcctgtacatacattttttggaggacctacttgcaaacta
ttgaccaaaaatgccattttccaaagcccagagaatgatggcaacatcctggtgtgtact
ggggatgaagcagcaaattctgccctgctgtgggatgctgccagtggctcgttgctccag
gacctacagaccgatcagcctgtgttggacatctgcccatttgaggtgaaccgtaacagc
tacttggctaccttaacagagaagatggtccacatctataagtgggagtga

>gi568815582r:74574960_74795757|GENSCAN_predicted_peptide_3|106_aa
MSRAWWRAPVVPAIAGSRGPPLAASAKRKGPPEFSSYVRGARAHSRLGSEPAAGRKATKK
TDKPRQDDKDDLDVTELTNEDPLDQLVKYGVNCGPIVGTTRKLYEK

>gi568815582r:74574960_74795757|GENSCAN_predicted_CDS_3|321_bp
atgagccgggcgtggtggcgcgcacctgtggtcccagctattgcgggaagccgagggccg
ccgctcgccgccagcgccaaaagaaaggggcccccggaattctccagctacgtacgagga
gcgcgagcccacagccgtctcggctccgagcccgccgccggcaggaaagccacaaagaaa
actgataaacccagacaagatgataaagacgatctagatgtaacagaactcactaatgaa
gatcctttggatcagcttgtgaaatacggagtgaattgtggtcctattgtgggaacaacc
aggaagctgtatgagaaatag

>gi568815582r:74574960_74795757|GENSCAN_predicted_peptide_4|542_aa
MQAKQMLALAKVLGQKQEHRGRDRGALSPPATCGVRYSQQSAGCGHQERGRRGTPAGLAF
ANFSPGQEAVVGKKVEERAFWNCARDRLDAHPSGGAKGRFTPRIQPTKGECEEAAQLPQS
EVEQVIHKRCEEMKYCKKQCRRLGHRVLGLIKPLEMLQDQGKRSVPSEKLTTAMNRFKAA
LEEANGEIEKFSNRSNICRFLTASQDKILFKDVNRKLSDVWKELSLLLQVEQRMPVSPIS
QGASWAQEDQQDADEDRRAFQMLRRGKLGLWSDLPPKCMQEIPQEQIKEIKKEQLSGSPW
ILLRENEVSTLYKGEYHRAPVAIKVFKKLQAGSIAIVRQTFNKEIKTMKKFESPNILRIF
GICIDETVTPPQFSIVMEYCELGTLRELLDREKDLTLGKRMVLVLGAARGLYRLHHSEAP
ELHGKIRSSNFLVTQGYQVKMPFPLCDGDISTPKTLFLLLSRSSCSLTIRCAIPPFIPGI
PYGARCCNSEKIRKLVAVKRQQEPLGEDCPSELREIIDECRAHDPSVRPSVDEQKRRLND
VF

>gi568815582r:74574960_74795757|GENSCAN_predicted_CDS_4|1629_bp
atgcaagccaagcagatgctggctttggcaaaagtccttggacaaaagcaggaacataga
ggtagggatcggggcgccttgtcgccgccagccacgtgtggcgtccggtacagtcagcag
agtgcagggtgcgggcaccaggaaagggggcgcaggggaactcccgcgggcctcgcgttt
gcaaacttctcgcctgggcaggaggcggtcgtgggaaagaaggtggaagagcgagctttt
tggaactgtgcacgggacagattggacgcacacccctcgggaggcgcgaagggccgcttc
accccacgcatccagccaaccaagggagagtgtgaggaggcggcacagctgccccagtcc
gaagtagagcaggtcatccacaaacggtgtgaagagatgaaatactgcaagaaacagtgc
cggcgcctgggccaccgcgtcctcggcctgatcaagcctctggagatgctccaggaccaa
ggaaagaggagcgtgccctctgagaagttaaccacagccatgaaccgcttcaaggctgcc
ctggaggaggctaatggggagatagaaaagttcagcaatagatccaatatctgcaggttt
ctaacagcaagccaggacaaaatactcttcaaggacgtgaacaggaagctgagtgatgtc
tggaaggagctctcgctgttacttcaggttgagcaacgcatgcctgtttcacccataagc
caaggagcgtcctgggcacaggaagatcagcaggatgcagacgaagacaggcgagctttc
cagatgctaagaagaggcaagctgggtctttggtcagatttaccaccaaaatgcatgcag
gagatcccgcaagagcaaatcaaggagatcaagaaggagcagctttcaggatccccgtgg
attctgctaagggaaaatgaagtcagcacactttataaaggagaataccacagagctcca
gtggccataaaagtattcaaaaaactccaggctggcagcattgcaatagtgaggcagact
ttcaataaggagatcaaaaccatgaagaaattcgaatctcccaacatcctgcgtatattt
gggatttgcattgatgaaacagtgactccgcctcaattctccattgtcatggagtactgt
gaactcgggaccctgagggagctgttggatagggaaaaagacctcacacttggcaagcgc
atggtcctagtcctgggggcagcccgaggcctataccggctacaccattcagaagcacct
gaactccacggaaaaatcagaagctcaaacttcctggtaactcaaggctaccaagtgaag
atgcctttccccctctgcgatggtgatataagtactcccaaaacactgtttctactactc
tcacgctcttcatgcagcctgactataagatgcgctattccacctttcatccctggtatc
ccatacggcgctagatgctgtaattctgagaagatccgcaagctggtggctgtgaagcgg
cagcaggagccactgggtgaagactgcccttcagagctgcgggagatcattgatgagtgc
cgggcccatgatccctctgtgcggccctctgtggatgagcagaagcgcagacttaatgat
gtgttctga

>gi568815582r:74574960_74795757|GENSCAN_predicted_peptide_5|487_aa
MAPAPPPAASFSPSEVQRRLAAGACWVRRGARLYDLSSFVRHHPGGEQLLRARAGQDISA
DLDGPPHRHSANARRWLEQYYVGELRGEQQTGDKHPMRSETHHITETALAGVTRTFAFLH
PVGSMENEPVALEETQKTDPAMEPRFKVVDWDKNTASGCLTPRAEDWLSIHRDTLILTPI
VCGRLGPTSITDEGTEGLREEKMHVQDLTAGQRHSQALMDLVDWRKPLLWQVGHLGEKYD
EWVHQPVTRPIRLFHSDLIEGLSKTVWYSVPIIWVPLVLYLSWSYYRTFAQGNVRLFTSF
TTEYTVAVPKSMFPGLFMLGTFLWSLIEYLIHRFLFHMKPPSDSYYLIMLHFVMHGQHHK
APFDGSRLVFPPVPASLVIGVFYLCMQLILPEAVGGTVFAGGLLGYVLYDMTHYYLHFGS
PHKGSYLYSLKAHHVKHHFAHQKSGGSHPLGGQVALGDPLLPGASLPRAQPTGLLQAVAT
GSSRKGK

>gi568815582r:74574960_74795757|GENSCAN_predicted_CDS_5|1464_bp
atggcccccgctccgccccccgccgcctccttctcgccctccgaggtccagcggcgcctg
gcggccggcgcgtgctgggtccgccgcggggcccgcctctacgacctctccagcttcgtg
cggcaccacccggggggcgagcagctgctgcgggccagggcgggccaggacatcagcgcc
gacctggacgggccgccgcacaggcactcggccaacgcgcgccgctggctggagcagtac
tacgtgggagagctccgcggggagcagcagacaggtgataagcatcccatgcgctctgaa
acccaccacatcacagaaacagcccttgctggcgttaccaggaccttcgccttcctccac
ccggtgggctccatggagaacgagcctgtagcccttgaggaaactcagaagacagatcct
gctatggaaccacggttcaaagtggtggattgggacaagaacacagccagtggctgcctg
actccccgtgctgaagattggctgagcatccaccgagacaccctcatcctcactccgatt
gtgtgtggcagattggggcccaccagcatcacagatgagggcactgaggggctccgggag
gaaaagatgcacgtccaggatctcacagctggtcaaaggcacagccaggctctaatggac
ctggtggactggcgaaagcctctcctgtggcaggtgggccacttgggagagaagtacgat
gagtgggttcaccagccggtgaccaggcccatccgcctcttccactcagacctcattgag
ggcctctctaagactgtctggtacagtgtccccatcatctgggtgcccctggtgctgtat
ctcagctggtcctactaccgaacctttgcccagggcaacgtccgactcttcacgtcattt
acaacagagtacacggtggcagtgcccaagtccatgttccccgggctcttcatgctgggg
acattcctctggagcctcatcgagtacctcatccaccgcttcctgttccacatgaagccc
cccagcgacagctattacctcatcatgctgcacttcgtcatgcacggccagcaccacaag
gcacccttcgacggctcccgcctggtcttcccccctgtgccagcctccctggtgatcggc
gtcttctacttgtgcatgcagctcatcctgcccgaggcagtagggggcactgtgtttgcg
gggggcctcctgggctacgtcctctatgacatgacccattactacctgcactttggctcg
ccgcacaagggctcctacctgtacagcctgaaggcccaccacgtcaagcaccactttgca
catcagaagtcaggagggtcacatccacttggtggccaggtggcccttggtgacccactt
cttcctggagcgtccctgcctagagctcagcccacaggactgcttcaggccgtggccaca
ggtagcagccgcaaggggaaatga