GENSCAN 1.0	Date run:  5-Nov-116	Time: 04:04:42

Sequence gi568815582r:60955448_61155914 : 200467 bp : 36.06% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.12 PlyA -     32     27    6                               1.05
 1.11 Term -  24099  23648  452  1  2   47   42   188 0.715   4.46
 1.10 Intr -  24901  24747  155  0  2  113   84    77 0.928   8.59
 1.09 Intr -  38624  38562   63  1  0   46   89   103 0.263   3.11
 1.08 Intr -  51738  51720   19  1  1  104  111   -24 0.000  -3.75
 1.07 Intr -  60117  60079   39  1  0  129   93    18 0.059   3.68
 1.06 Intr -  65411  65330   82  2  1   89   61   130 0.192   8.69
 1.05 Intr -  66960  66857  104  1  2  104   50    17 0.478  -1.53
 1.04 Intr -  75515  75378  138  0  0   45   82   116 0.414   6.21
 1.03 Intr -  95275  95111  165  2  0   47   21   185 0.007   6.71
 1.02 Intr - 100278 100090  189  1  0   -7   -2   250 0.004   5.14
 1.01 Init - 100467 100308  160  0  1   81   17   238 0.386  16.04
 1.00 Prom - 104300 104261   40                              -2.15

 2.00 Prom + 109144 109183   40                              -3.15
 2.01 Init + 109524 109585   62  2  2   94   50    68 0.065   4.37
 2.02 Intr + 127002 127138  137  0  2   62   70    94 0.151   4.29
 2.03 Intr + 134913 135087  175  1  1  105   98    39 0.133   4.68
 2.04 Intr + 136326 136497  172  0  1  -21   98   160 0.091   5.12
 2.05 Intr + 138504 138834  331  2  1  -16   41   244 0.592   3.58
 2.06 Term + 139169 139578  410  0  2   40   48   180 0.588   3.59
 2.07 PlyA + 139666 139671    6                               1.05

 3.00 Prom + 140915 140954   40                              -3.45
 3.01 Init + 141095 141170   76  1  1   83   99    35 0.974   5.40
 3.02 Intr + 143427 143562  136  1  1   65   91   200 0.692  16.71
 3.03 Intr + 157618 157754  137  1  2  -50   98   137 0.039   0.19
 3.04 Intr + 165969 166049   81  1  0  132   17    41 0.006   0.09
 3.05 Intr + 172429 172526   98  2  2   11  115    67 0.004   0.51
 3.06 Intr + 172579 172651   73  0  1   70  105    32 0.190   1.16
 3.07 Intr + 175668 175785  118  1  1   41   89    80 0.159   2.00
 3.08 Intr + 193840 193987  148  1  1   78   81    59 0.072   3.52
 3.09 Intr + 194108 194405  298  1  1   87   69   126 0.591   6.12
 3.10 Term + 196241 196554  314  0  2   54   54   245 0.987  11.88
 3.11 PlyA + 196623 196628    6                               1.05

 4.03 PlyA - 196723 196718    6                               1.05
 4.02 Term - 199980 199018  963  0  0   73   37   288 0.852  13.26
 4.01 Init - 200053 200036   18  1  0   86   86    16 0.671   1.20

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl + 109524 109700  177  2  0   94   48   133 0.815   4.60
S.002 Intr - 188645 188530  116  1  2   71  116    87 0.910   8.97
S.003 Init - 191664 191633   32  0  2  111   88    48 0.883   6.36


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815582r:60955448_61155914|GENSCAN_predicted_peptide_1|521_aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQGKEGIPPDQQRLIFAGKQLEDGRVYSSSC
VETSGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRECPSDECADEC
APCCTAAGAAAGMYEQGWIPLTPPYEMLRLAKSTGVPGPEVWEPLGPSSAAAQCTPSTKR
QPECFIKLVPDPVLPDWIKPPNAGHQPHYTGAFPLASALVNEMLDVNWAVRVWKANKVFL
IPFSTSVLKPVGDTASNTLDVINVLDFKEEKTKCGSENESKSGISFRFGSIADSAWKNRH
CLVDAVTIEMALQVPQDMSRILGMSLFWPESSVAGVAFCPSFAEPVGLVLLTQPGRLRAA
QATSLNPTPAKGTEKAPQVPTLVHGTCSPVPSLQAFCGQKVGPHRGPTPFHPGTCLPPAA
VHGAWARLNFAWRSEWALTAGRSLAAGAGISKPARLGRAFLGPQECRDAWVPSCSLGSCS
CTLEGVAPSCSWAPAGSMEHAALVASPCCSRCVMAVAGHLE

>gi568815582r:60955448_61155914|GENSCAN_predicted_CDS_1|1566_bp
atgcagattttcgtgaaaacccttacggggaagaccatcaccctcgaggttgaaccctcg
gatacgatagaaaatgtaaaggccaagatccagggtaaggaaggaattcctcctgatcag
cagagactgatctttgctggcaagcagctggaagatggacgagtctactcttcatcttgt
gttgagacttctggtggtgctaagaaaaggaagaagaagtcttacaccactcccaagaag
aataagcacaagagaaagaaggttaagctggctgtcctgaaatactataaggtggatgag
aatggcaaaattagtcgccttcgtcgagagtgcccttctgatgaatgtgctgatgagtgt
gcaccctgctgtactgccgccggtgctgctgctggcatgtatgaacaaggatggattcca
ctaacaccgccctatgaaatgcttcggctggcaaaatccactggagtgccgggaccagag
gtctgggagcccctcggcccttctagtgcagcagcgcaatgcaccccctccaccaagagg
cagccagagtgcttcattaagctggtccctgatcccgtgcttcctgactggataaaaccc
ccaaacgcgggtcaccagccacattatacaggagcgttcccactggcatcagccttagtt
aatgaaatgcttgatgtgaattgggctgttagggtatggaaagccaataaagtattttta
ataccattttctacatctgttttaaagccagttggggacacagccagcaacactttagac
gtcatcaacgttttagacttcaaagaagagaaaacaaaatgtggttctgaaaatgaaagt
aaatctgggatttcttttcggtttgggtccattgctgactcagcctggaagaaccgccac
tgccttgtggatgccgtaaccatagaaatggctttacaagtaccccaggacatgagcagg
atccttggaatgtctcttttctggccagaaagctctgtggctggtgttgccttttgccca
agttttgctgagcctgtggggcttgttttactcactcagcctggcaggctacgagcagct
caagctaccagcctgaatcccacacctgccaagggtacggaaaaggcaccacaagttccc
actctggtccatgggacttgtagcccagtccccagccttcaggccttctgtggccagaag
gtggggcctcacaggggacccacacccttccacccaggaacctgtctgcctcctgctgct
gttcatggtgcctgggctaggctgaactttgcttggagatcagagtgggcactgacagca
gggagaagcctggcagcaggagcaggcatttccaagcctgcaaggctaggcagggccttc
ctgggcccccaagagtgcagggatgcctgggtccccagctgcagtttgggcagctgcagc
tgcaccttggagggtgtggctccatcctgctcctgggctcccgctggctccatggagcat
gcagccctagttgcatctccctgctgcagccggtgtgtgatggcagtagctggccatctg
gagtag

>gi568815582r:60955448_61155914|GENSCAN_predicted_peptide_2|428_aa
MDEAGNHHSQRTDTGTENQTPGFSLDILNIPESRVRTYFHTRLHRSLYCFSVCFASGPYK
GAYQAQVRERSSGLLCVVTLQPQEKLEILGFLVLLRSEFDIEGGWQDGQIGTALVCSSQR
DQCRRPKVDKSTKMMKNERKKSENSKNQNVSSPPKDHNSSPAREQNWMEKEFDELNRSRL
QKTTSQTNKEEKREESNRHNKGDITTDLTEIQTTIREYNKHLYANKLENLEEMDKFLDTY
ILRRLTQEKFESLNRPITISEIEAVINSLPIKKSPGPDRFTAEFYQRSKRGADAEKTFDT
IQHPFMLKTLNKLGIDGTYLKMKRAIYDKPTASIVLNEQKLKAFPLKTGTRQGCPLSTTP
IQHSIGSSGQGNQARERNKGIQIGREEVKLSLFADDMIVYLENPIVPAKNLLKLLCNFSK
VSAYKINV

>gi568815582r:60955448_61155914|GENSCAN_predicted_CDS_2|1287_bp
atggatgaagctggaaaccatcattctcagcgaactgacacaggaacagaaaaccaaaca
ccaggtttttccttggacatcctgaacatcccagagagtcgggttagaacttattttcac
acaagactacaccggagcctgtactgcttttctgtgtgcttcgcttctggcccttacaag
ggtgcctatcaggctcaagtgagagaaagaagctctgggcttctttgtgtagtgactctg
caacctcaagaaaaacttgagattcttggctttttagtacttttgagatctgaattcgac
atagaaggtggctggcaagatggtcaaataggaacagctctagtctgcagctcccagcga
gatcaatgcagaagaccaaaggtagataaatccacgaagatgatgaaaaatgagcgcaaa
aagtctgaaaattccaaaaaccagaatgtctcttctcctccaaaggatcacaactcctca
ccagcaagggaacaaaactggatggagaaggaatttgatgaattgaacagaagtaggctt
cagaagaccactagccagactaataaagaagaaaagagagaagaatcaaatagacacaat
aaaggcgatatcaccactgatcttacagaaatacaaactaccatcagagaatacaataaa
cacctctatgcaaataaactagaaaatctagaagaaatggataaattcctggacacatac
atcctccgaagactcacccaggaaaaattcgaatccctgaatagaccaataacaatttct
gaaattgaagcagtaattaatagcctaccaatcaaaaaaagcccaggaccagacagattc
acagctgaattctaccagaggtcaaaaagaggagctgatgcagaaaagaccttcgataca
attcaacaccccttcatgctaaaaactctcaacaaactaggtattgatggaacgtatctc
aaaatgaaaagagctatttatgacaaacccacagccagcatcgtgctaaatgagcaaaag
ctgaaagcattccctttgaaaactggcacgagacaaggatgccctctctcaaccactcct
attcaacatagtattggaagttctggccagggcaatcaggcaagagaaagaaataaaggt
attcaaataggaagagaggaagtcaaattgtctctgtttgcagatgacatgattgtatat
ttagaaaatcccatcgtcccagccaaaaatctccttaagctgctatgcaacttcagcaaa
gtctcagcatacaaaatcaatgtgtga

>gi568815582r:60955448_61155914|GENSCAN_predicted_peptide_3|492_aa
MDEAGNHHSQQTNTGTENQTLHVLTQEEEEEEEEEEEEEGRRKKEEKKKKKEEETPLKKK
LLESLTYIYYRLFNITIVPEVEERENLSETRWRDICMGALESLSAVQDVYTFLNAKGLYT
HTAPTFIGKASGHGICPPDKLLSEFVPSDVRTCSEFLPSGGFVVSLSSGVKLQTFASGVL
HSSQWVRGLAGLWSEAADLRGLLGGLTHICRHRSPRNLFITVRHSQLFPMELSAHGFLLH
LGTAWAETLAVAMTQGLALASRSSTPEKHRATANWNDQLWVEWLCCRLKPSGSKGRYHSH
GSGTGTVICAGSSTPEKCRATTNGMFSQRCGGCAAGSSRTLPDEEQQVVGLREKTVLPPL
CRVVVACWRCEESNQRLCFLPSPGAARADTQQETIEAEDSGRAVSPRLGKLLEAFGDLIE
CALLGSQMRDLKVQPTLGCIPQAKHETLDQTLKDILLLEGPEAELGLFQRVTLLSQDITF
SVLSTFILENYK

>gi568815582r:60955448_61155914|GENSCAN_predicted_CDS_3|1479_bp
atggatgaagctggaaaccatcattctcagcaaactaacacaggaacagaaaaccaaaca
ctgcatgttctcactcaggaagaagaagaagaagaggaggaggaggaggaagaagaagga
agaaggaagaaggaggagaagaagaagaagaaggaggaggagactccattaaaaaaaaaa
ctcctggaatccttaacatacatttactacagactcttcaacatcaccattgtaccagaa
gtggaggagagggaaaacctctctgaaacaaggtggcgagatatctgtatgggagctctg
gaaagtttatcagctgtgcaagatgtttacacatttctgaatgcaaaaggactctacact
cacacagcacctacattcattggaaaggcatcagggcatgggatttgtcctcctgataag
ctgttgagtgagtttgttccttctgatgttcggacgtgttcagagtttcttccttctggt
gggttcgtggtctcgctgtcttcaggagtgaagctgcagaccttcgcgtctggagttctt
cattcttctcagtgggttcgtggtctcgctggcctctggagtgaagctgcagaccttcga
gggctccttggaggtttaactcacatttgtcgacatcgatcccctagaaatttgttcatt
acagttagacattcccagctgtttcccatggaactttctgctcatggatttctgcttcac
ttgggaacagcatgggcagagacattggcagtggcaatgacacagggcctggcacttgcc
tctaggagctccaccccagagaaacacagagccactgctaactggaatgatcagctgtgg
gtggagtggctgtgttgtaggctcaagcctagtggcagcaagggcaggtaccatagccat
ggtagtggtacagggactgtaatttgtgctgggagctctaccccggagaaatgcagagcc
actaccaatggaatgttcagccagcggtgtggtggttgtgctgcaggctcaagccggacc
ctgcctgatgaagagcagcaagtagtggggctcagggaaaagacagttttgcctcctctc
tgtagggtggttgtggcatgctggaggtgtgaggagagcaatcagcgtctttgttttctc
cctagcccgggggcagcaagggcagatacacagcaagagacaatagaagcagaggattca
gggcgagctgtttctccaaggctagggaagctacttgaggcatttggagacttgattgaa
tgtgccttacttggatcacagatgagggacctgaaagtgcagcctaccttgggctgtata
cctcaggcgaaacatgaaacactggaccaaacactgaaggacattctgttgctagagggc
cctgaagcagagctagggctgttccagcgagttaccctcctatctcaagacattacattc
tcagtgctttctacatttatccttgagaattacaagtga

>gi568815582r:60955448_61155914|GENSCAN_predicted_peptide_4|326_aa
MAIPPKNWKKITLKFIWNQKRACIAKTILSQKNKAGDITLLDIKLYYKAMVTKTAWYWYQ
NRDIDQWNRTEPSEIIPHIYNHLIFDKPDKNKKWGKDSLFNKWCWENWLAKCKKLKLDPL
LTPYTKINSRWIKDLNVRPKTIKTLEENLGNTIQDIGTGKDFTSKTPKAMATKAKIDKWD
LIKLKSFCTAKETTIRVNRQPAEWEKIFAIYSSDKGLISRIYKELKQIYKKKTSKPIKKW
VKDMNRHFSKEDIYAANRHMKKCSSSLAIREMQIKTTMRYNLTPVRMALIKKSGNNRCWR
GCGETGTLLHCWWDCKLVQPLWKTVW

>gi568815582r:60955448_61155914|GENSCAN_predicted_CDS_4|981_bp
atggccataccgcccaagaattggaagaaaattactttaaagttcatatggaaccaaaaa
agagcctgcattgccaagacaatcctaagccaaaagaacaaagctggagacatcacgcta
cttgacatcaaactatactacaaggctatggtaaccaaaacagcatggtactggtaccaa
aacagagatatagaccaatggaacagaacagagccctcagaaataataccacacatctac
aaccatctgatctttgacaaacctgacaaaaacaagaaatggggaaaggattccctattt
aataaatggtgctgggaaaactggctagccaaatgtaaaaagctgaaactggatccctta
cttacaccttatacaaaaattaattcaaggtggattaaagacttaaatgttagacctaaa
accataaaaaccctagaagaaaacctaggcaataccattcaggacataggcactggcaag
gacttcacgtctaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggat
ctaattaaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaa
cctgcagaatgggagaaaatttttgcaatctactcatctgacaaagggctaatatccaga
atctacaaagaactcaaacaaatttacaagaagaaaacaagcaagcccatcaaaaagtgg
gtaaaggatatgaacagacacttctcaaaagaagacatttatgcagccaacagacacatg
aaaaaatgctcatcatcactggccatcagagaaatgcaaatcaaaaccacaatgagatac
aatctcacaccagttagaatggcgctcattaaaaagtcaggaaacaacaggtgctggaga
ggatgtggagaaacaggaacacttttacactgttggtgggactgtaaactagttcaacca
ttgtggaagacagtgtggtga