GENSCAN 1.0	Date run:  5-Nov-116	Time: 01:00:33

Sequence gi568815582f:56508991_56683176 : 174186 bp : 47.41% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.05 Intr -   1044    967   78  0  0   85   94   117 0.863  11.75
 1.04 Intr -   1931   1869   63  2  0   77   87    39 0.661   1.61
 1.03 Intr -  10883  10756  128  0  2   47   86   238 0.557  19.90
 1.02 Intr -  14507  14431   77  1  2   82  105    27 0.229   2.96
 1.01 Init -  26146  26115   32  1  2   65  115    17 0.139   1.31
 1.00 Prom -  29154  29115   40                              -3.76

 2.00 Prom +  30949  30988   40                              -4.86
 2.01 Init +  52296  52333   38  2  2  112   99     7 0.978   3.72
 2.02 Term +  54396  54522  127  0  1  106   45   115 0.932   6.76
 2.03 PlyA +  55241  55246    6                              -0.45

 3.00 Prom +  56048  56087   40                               1.64
 3.01 Init +  58697  58826  130  1  1   93   70    76 0.732   4.86
 3.02 Term +  62477  62604  128  0  2   65   54    62 0.345  -1.06
 3.03 PlyA +  64188  64193    6                               1.05

 4.00 Prom +  66472  66511   40                              -2.26
 4.01 Init +  80197  80324  128  0  2   60   27   243 0.903  13.06
 4.02 Intr +  80824  80945  122  1  2   66   70    48 0.414   0.94
 4.03 Term +  81850  81959  110  2  2   68   54    88 0.403   2.07
 4.04 PlyA +  82076  82081    6                               1.05

 5.00 Prom +  85686  85725   40                              -3.16
 5.01 Init +  99666  99693   28  2  1   92  111    24 0.848   5.12
 5.02 Intr + 100002 100067   66  1  0  154  106    28 0.987  10.08
 5.03 Intr + 106212 106424  213  1  0   25   92   115 0.007   4.29
 5.04 Intr + 108100 108331  232  2  1   33   46   126 0.008  -0.27
 5.05 Intr + 108398 108600  203  2  2   40   95    84 0.729   3.23
 5.06 Term + 109599 109690   92  1  2  134   41   100 0.746   7.78
 5.07 PlyA + 109808 109813    6                               1.05

 6.00 Prom + 114930 114969   40                              -2.86
 6.01 Init + 116862 116889   28  2  1   76   95    19 0.803   1.21
 6.02 Intr + 117476 117584  109  0  1  130   47    83 0.926   7.74
 6.03 Term + 117890 118010  121  2  1  130   36   105 0.954   7.45
 6.04 PlyA + 118100 118105    6                               1.05

 7.00 Prom + 119750 119789   40                              -7.36
 7.01 Init + 122987 123518  532  1  1   95   62   115 0.641   4.62
 7.02 Intr + 124350 124415   66  1  0  145   70    40 0.980   6.78
 7.03 Term + 124761 124852   92  1  2  131   41   102 0.981   7.68
 7.04 PlyA + 124970 124975    6                               1.05

 8.00 Prom + 125964 126003   40                              -9.16
 8.01 Init + 126828 126855   28  2  1   76   99    31 0.947   2.80
 8.02 Intr + 127449 127557  109  1  1  139   53    80 0.783   8.94
 8.03 Intr + 129126 129294  169  0  1  -28   47   150 0.391  -0.75
 8.04 Intr + 129703 129776   74  0  2   66   95    86 0.860   5.30
 8.05 Intr + 130274 130339   66  2  0  157   70     2 0.787   3.32
 8.06 Term + 130869 130989  121  0  1  136   43    74 0.889   5.65
 8.07 PlyA + 131078 131083    6                               1.05

 9.00 Prom + 132760 132799   40                              -3.06
 9.01 Init + 134380 134539  160  0  1   82   66   104 0.865   7.59
 9.02 Intr + 134947 135018   72  2  0   54   75    72 0.717   1.88
 9.03 Intr + 135121 135186   66  2  0  158   70    44 0.973   8.48
 9.04 Intr + 139836 139901   66  1  0  130   70    56 0.731   6.88
 9.05 Term + 140433 140524   92  1  2  133   44    48 0.733   2.78
 9.06 PlyA + 140646 140651    6                               1.05

10.00 Prom + 142860 142899   40                              -1.46
10.01 Init + 142964 142991   28  1  1   46  110    24 0.642   0.20
10.02 Intr + 143581 143646   66  2  0  137   65    39 0.959   5.38
10.03 Term + 143984 144075   92  0  2  137   41    74 0.983   5.48
10.04 PlyA + 144194 144199    6                               1.05

11.00 Prom + 146613 146652   40                              -5.36
11.01 Init + 149069 149096   28  1  1   59   95    31 0.654   0.91
11.02 Intr + 149685 149773   89  1  2  125    2    71 0.473   1.89
11.03 Intr + 151432 151562  131  0  2   55   93   141 0.759  10.79
11.04 Term + 154181 154307  127  2  1   97   52   142 0.930   9.26
11.05 PlyA + 155155 155160    6                               1.05

12.07 PlyA - 156075 156070    6                               1.05
12.06 Term - 157980 157851  130  2  1  142   46   111 0.961   9.95
12.05 Intr - 158390 158279  112  0  1  111   53    81 0.552   6.34
12.04 Intr - 161421 161318  104  2  2  110  115    18 0.009   6.52
12.03 Intr - 166507 166378  130  2  1   50    3   115 0.008  -1.05
12.02 Intr - 173217 173103  115  0  1  126   89    14 0.658   5.32
12.01 Intr - 173640 173351  290  1  2   77   60   110 0.728   4.06

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr + 108095 108331  237  2  0   83   46   129 0.837   4.93
S.002 Term + 135720 135775   56  1  2  128   48    49 0.908   2.62
S.003 Init - 159003 158976   28  0  1   69   95    36 0.973   2.28
S.004 Intr + 161516 161624  109  0  1  104   53    82 0.935   5.64
S.005 Term + 161908 162037  130  1  1  129   47    65 0.930   4.15


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815582f:56508991_56683176|GENSCAN_predicted_peptide_1|126_aa
MLSAGEHAFCRPRSSGVPAVTDVRMTRVSSEEPMIPAAAIMLLPVFTLKLRHKISPRMVA
IGRYDGTHPCLAAATQTGKVTGDNVNSLALCDFDGDGKKELLVGSEDFDIRVFKEDEIVA
EMTETE

>gi568815582f:56508991_56683176|GENSCAN_predicted_CDS_1|378_bp
atgctttctgcaggtgagcacgccttctgcaggcctagatcctcgggagtcccagctgtc
actgatgtgaggatgacacgtgtctcctctgaagaaccaatgattcctgccgccgccatc
atgctgctgcctgtgttcaccctgaaactgcgccacaaaatcagcccccgaatggtggcc
atagggcgctacgacgggactcacccgtgcctggcggccgccacccaaacgggcaaggtt
actggagacaatgttaattccttggccttgtgtgactttgatggtgatggaaagaaagag
cttcttgttggatctgaggattttgatatccgagtttttaaggaagatgagattgtggca
gaaatgacagaaacagag

>gi568815582f:56508991_56683176|GENSCAN_predicted_peptide_2|54_aa
MEADKTVGGSSRSACHSDLLMTMDPNPFLLVRSSQSKIRGSMGQTEAQVVLMGE

>gi568815582f:56508991_56683176|GENSCAN_predicted_CDS_2|165_bp
atggaggcagacaagactgtgggaggatctagcaggagtgcctgccacagtgacctgctg
atgaccatggatccaaatccctttctcctcgttagaagctctcagtccaaaatccgtggt
tccatgggtcagactgaggcccaggtggtccttatgggtgaatga

>gi568815582f:56508991_56683176|GENSCAN_predicted_peptide_3|85_aa
MPYVPHSISILTFVVALSCLLGGICMCGDNCKCTTCNCKTYWKNGDAEAPGKSMAESHKT
SRGQNWELSSGLPDPEAMLLSMRYG

>gi568815582f:56508991_56683176|GENSCAN_predicted_CDS_3|258_bp
atgccttatgttccccactccatctccatcctcacgtttgtggtggctctgtcctgtctt
ctaggaggaatctgcatgtgtggagacaactgcaaatgcacaacctgcaactgtaaaaca
tattggaagaatggagatgctgaggctccaggaaagtcaatggctgaaagtcacaagact
tccagggggcagaactgggaactgagctcaggtctgcctgacccagaggccatgctcttg
tctatgcgatatggatga

>gi568815582f:56508991_56683176|GENSCAN_predicted_peptide_4|119_aa
MVRARFHAVAAAAASTSPAGPTRGVGWQCAHSGGEWVVHADAGRGDPSSSTLTLPVASPS
LGGSCTCADSCKCEGCKCTSCKKSCCSCCPAECEKCAKDCVCKGGEAAEAEAEKCSCCQ

>gi568815582f:56508991_56683176|GENSCAN_predicted_CDS_4|360_bp
atggtacgtgcgcgcttccacgcagtggcggctgctgcggcgagcacgtcccctgcggga
cccacgcggggagtgggctggcagtgcgcgcacagcggcggcgagtgggtcgtgcacgcg
gatgcggggcgtggggacccgagttcgtccacattaacccttcctgtggcgtcgccctct
ctaggtggctcctgcacctgcgcggactcctgcaagtgcgagggatgcaaatgcacctcc
tgcaagaagagctgctgctcctgctgccctgcggagtgtgagaagtgtgccaaggactgt
gtgtgcaaaggcggagaggcagctgaggcagaagcagagaagtgcagctgctgccagtga

>gi568815582f:56508991_56683176|GENSCAN_predicted_peptide_5|277_aa
MDPNCSCAAGDSCTCAGSCKCKECKCTSCKKMLSFGPCHIGAKLLPLHIGFPIQWQQFPL
NFYLQKRVTTELFQDARAPLTNLFLTDVVKVVSFGHSQVEWAGLPRDEAGVAHRLREWRN
TADGVVGVGISRPPEAGFPERSGTEMASNHKEMGNMGKLRGQDGTDAADDRAHRPERASD
PSTYPQEAQTQRGGCKRGAGPLRPVPSPPAKGAAGSRLQRAFQLPDCLFASPVISWLEMD
PNCSCATGCCSCCPMGCAKCAQGCVCKGASEKCSCCA

>gi568815582f:56508991_56683176|GENSCAN_predicted_CDS_5|834_bp
atggatcccaactgctcctgcgccgccggtgactcctgcacctgcgccggctcctgcaaa
tgcaaagagtgcaaatgcacctcctgcaagaaaatgctgtcctttggcccctgccacatt
ggggccaaattattgccattgcatataggattcccaattcagtggcagcagtttccactg
aatttctacctgcagaaaagagtgaccacagagctcttccaggatgctagggcgcccctc
acaaatttatttctcacagatgtggtgaaagtggtgtcctttggacactcccaggttgaa
tgggcaggcctacccagggacgaagctggggttgcacaccggctccgggaatggcgaaat
accgcagatggggtggtgggggtgggaatatcgcgaccaccagaggctgggttcccggaa
cgctcggggacggagatggccagcaaccacaaggaaatggggaatatggggaagttgcgc
gggcaggacggcacggacgccgcggacgaccgggcgcacaggcctgagcgagcgagcgat
ccctccacgtacccacaggaggcccagactcagcggggcgggtgcaagcgcggggcgggg
cctctgcgtccggtcccatctccgcctgcaaaaggagcagctggctccaggctccaacgt
gccttccagctgcctgactgcctcttcgcctctcccgtcatttcttggctcgaaatggac
cccaactgctcctgcgccactggctgctgctcctgctgccccatgggctgtgccaagtgt
gcccagggctgcgtctgcaaaggggcgtcggagaagtgcagctgctgtgcctga

>gi568815582f:56508991_56683176|GENSCAN_predicted_peptide_6|85_aa
MDPNCSCATGGSCTCAGSCKCKECKCTSCKKSECGAISRNLGLWLRLLFLLPRGLCQVCP
GLRLQRGIGEVQLLCLMWEQLFSQM

>gi568815582f:56508991_56683176|GENSCAN_predicted_CDS_6|258_bp
atggaccccaactgctcttgcgccactggtggctcctgcacgtgcgccggctcctgcaag
tgcaaagagtgcaaatgcacctcctgcaagaagagtgagtgcggggccatctccaggaat
ctggggctgtggctcaggctgctgttcctgctgccccgtgggctgtgccaagtgtgccca
gggctgcgtctgcaaaggggcatcggagaagtgcagctgctgtgcctgatgtgggaacag
ctcttctcccagatgtaa

>gi568815582f:56508991_56683176|GENSCAN_predicted_peptide_7|229_aa
MEIYLQRRTWTNVPPHPLRRREWTGERGRPVFPVLLCTEEPVRGTAVWTGTGKAGKEEKR
KPHWWRVLCTRLAPYHTPPAPHTTDPGTGAGGLHRDSGTGPVENGGARGWGGDARDAKAG
VPESAGRRVEGKGNFGETGKGGRDLGDTAYHPAHSPSRANPSQRGGRAAHSERSSGDGVS
CACTGSCTCKECKCTSCKKSCCSCCPVGCAKCAHGCVCKGTLENCSCCA

>gi568815582f:56508991_56683176|GENSCAN_predicted_CDS_7|690_bp
atggagatttatctgcaaaggaggacctggacaaatgttcccccacatcctctcaggcga
agagaatggacgggagagagaggccgaccagtgttccccgtgttgctgtgtacggaggag
ccagtccgagggaccgcggtgtggacagggacaggcaaggcggggaaggaggagaaacga
aagccacattggtggcgggtgctctgcacacgactcgctccctaccacacgccccccgct
ccgcacacgaccgatccggggactggagcaggagggctgcaccgggactccgggacaggc
ccagttgaaaacggcggggcgagggggtggggtggagacgcccgcgacgccaaggctggg
gtcccggaaagcgcggggaggagggtggaaggcaaaggcaacttcggggaaactgggaaa
ggcggccgggacctcggggacactgcgtaccacccggcgcacagcccctcccgcgcaaac
ccgagccaaaggggcggtcgagcggcgcactcggagcggagctcaggggatggtgtctcc
tgcgcctgcaccggctcctgcacgtgcaaagagtgcaaatgcacctcctgcaagaagagc
tgctgctcctgctgccccgtgggctgtgccaagtgtgcccacggctgtgtctgcaaaggg
acgttggagaactgcagctgctgtgcctga

>gi568815582f:56508991_56683176|GENSCAN_predicted_peptide_8|188_aa
MDPNYSCTTGGSCTCAGSCKCKECKCTSCKKSECGAISRNLGLWLRDRQGDSEEKRKSHR
WRLLCTQLARYRTLHALHYADPGTGAGGCGCTQTSGQAELKTPLNFLLGISNLTAARNGP
QLLLRHWWLLHLHWLLQMQRVQMHLLQEELLLLLPHELCQVCPGLHLQRGIREVQLLCLM
SGQPCSKI

>gi568815582f:56508991_56683176|GENSCAN_predicted_CDS_8|567_bp
atggaccccaactactcctgcaccactggtggctcctgcacgtgcgccggctcctgcaag
tgcaaagagtgcaaatgcacctcctgcaagaagagtgagtgcggggccatctccaggaat
ctggggctgtggttaagggacaggcaaggcgacagcgaggagaaacgaaaatcacatcgg
tggcggttgctctgcacacaactcgctcgctaccgcacgctccacgctctgcactacgcc
gatccggggacaggagcaggaggctgtggctgcactcagacttcgggacaggccgagctg
aaaacccctctcaacttcttgcttgggatctccaacctcaccgcggctcgaaatggaccc
caactgctcctgcgccactggtggctcctgcacctgcactggctcctgcaaatgcaaaga
gtgcaaatgcacctcctgcaagaagagctgctgctcctgctgccccatgagctgtgccaa
gtgtgcccagggctgcatctgcaaaggggcatcagagaagtgcagctgctgtgcctgatg
tccggacagccctgctcgaagatatag

>gi568815582f:56508991_56683176|GENSCAN_predicted_peptide_9|151_aa
MECNLREIREGRDYSRDAAYRQEHSPSKASVSQRAAPRVRNSHVKEDPAPGPPVPPISEA
RGLRLKTARLQVTLKAKGGSCTCASSCKCKEYKCTSCKKTGSCTYASFCKCKEYKCTSCK
KNCCSCYPVGCAKCAQGCICKGASDKCSCCA

>gi568815582f:56508991_56683176|GENSCAN_predicted_CDS_9|456_bp
atggagtgcaatctccgggaaattcgggagggccgggattatagcagggacgccgcgtac
cgccaggagcacagcccctccaaagcgagcgtgagccaaagggccgcccccagggtgcgc
aacagccacgttaaggaggatcctgcgcccggcccgcctgtgcctccgatttctgaggcg
agaggactgaggctgaaaactgcccggctgcaggtcaccctcaaggccaaaggtggctcc
tgcacctgtgccagctcctgcaaatgcaaagagtacaaatgcacctcctgcaagaagact
gggtcctgcacttatgccagcttctgcaaatgcaaagagtacaaatgcacctcttgcaag
aagaactgctgctcctgctaccctgtgggctgtgccaagtgtgcccaaggctgcatttgc
aaaggggcatcagataagtgcagctgctgtgcctga

>gi568815582f:56508991_56683176|GENSCAN_predicted_peptide_10|61_aa
MDPNCSCTTGGSCACAGSCKCKECKCTSCKKCCCSCCPVGCAKCAQGCVCKGSSEKCRCC
A

>gi568815582f:56508991_56683176|GENSCAN_predicted_CDS_10|186_bp
atggatcccaactgctcctgcaccacaggtggctcctgtgcctgcgccggctcctgcaag
tgcaaagagtgcaaatgtacctcctgcaagaagtgctgctgctcttgctgccccgtgggc
tgtgccaagtgtgcccagggctgtgtctgcaaaggctcatcagagaagtgccgctgctgt
gcctga

>gi568815582f:56508991_56683176|GENSCAN_predicted_peptide_11|124_aa
MDPNCSCAAGVSCTCAGSCKCKECKCTSCKKSECEAISMGSKVTGDVEESVISATQSHEK
DWVQMKDVECADAVVMAYSAVGRWSRYPHPPPCTFVISFASPVSVCSSILVLAFFIGGSW
EPRE

>gi568815582f:56508991_56683176|GENSCAN_predicted_CDS_11|375_bp
atggaccccaactgctcctgcgccgctggtgtctcctgcacctgcgctggttcctgcaag
tgcaaagagtgcaaatgcacctcctgcaagaagagtgagtgtgaggccatctccatgggc
agcaaagtgactggagatgtggaggaaagcgtcatctcggcaacgcagagtcatgagaag
gactgggtgcagatgaaggatgttgagtgtgctgatgcagtggtgatggcatattctgca
gttggaaggtggtcgcgttatcctcatcccccgccctgcaccttcgtcatcagctttgcc
tctcccgtgtccgtgtgtagctccatcctcgtgctcgccttcttcattggcggaagctgg
gagccgagagagtga

>gi568815582f:56508991_56683176|GENSCAN_predicted_peptide_12|293_aa
XRVCTVAGKRASQGAELGVPYQASRSSWGPFRGKEKQEFPIKRKTRSGTDEKRGGAQKPA
ALFIVREEGRAQRPRLVLAPAPAESAPPAILGRVQQPACRETRNPGGLHTPSPRSTVCSF
AFPRVPGSRPWIGGSVLRDFPGLPATPLQDGSFENEGCPPKRMTLGDMQTLRSIKERSGA
SRQSSFPTQQKKRRPISSPFMLGKPSTLRLYSKAGVSCTCASSCKCKECKCTSCKKSECG
AISRNLGLWLRLLLLLPCGLCQVCPGLHLQRGIGEVQLLRLMSGQPCSQVQIE

>gi568815582f:56508991_56683176|GENSCAN_predicted_CDS_12|882_bp
ngaagagtctgtactgtggctgggaaacgggcatcccaaggcgcggagctaggtgtccct
taccaggcgagcaggagcagttggggtccatttcgaggcaaggagaagcaggagttcccg
atcaagaggaaaacacgcagcgggacagatgaaaagcgtggtggagcccagaagccggcg
gctctctttatagtccgggaagagggccgggcgcagaggccccgcctcgtccttgcaccc
gcccctgctgagtctgcaccgcccgcgatcctgggccgggtgcagcaacccgcgtgccgg
gaaactcggaatcccggcggtctacacacccccagcccccgctccactgtgtgtagcttt
gcatttcccagagtccctggatcacgtccctggatcggcgggagcgttctccgggacttt
ccaggcctgccggccaccccactgcaggatggcagttttgaaaatgagggatgccctcca
aagaggatgactttaggtgacatgcagaccctgcggtcaatcaaggagagaagtggggcc
agccgtcagagctcctttcccactcagcagaagaagagaagacccatctcctctccattc
atgctgggaaaaccaagcaccctccgtttgtattccaaagcaggtgtctcctgcacctgc
gccagctcctgcaagtgcaaagagtgcaaatgcacctcctgcaagaagagtgagtgcggg
gccatctccaggaatctggggctgtggctaaggctgctgctcctgctgccctgtgggctg
tgccaagtgtgcccagggctgcatctgcaaaggggcatcggagaagtgcagctgctgcgc
ctgatgtcgggacagccctgctcccaagtacaaatagagtga