GENSCAN 1.0	Date run:  4-Nov-116	Time: 09:43:47

Sequence gi568815582f:51545818_51746777 : 200960 bp : 40.08% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   1213   1252   40                              -2.25
 1.01 Init +   9772   9954  183  0  0   82    3   141 0.831   4.17
 1.02 Term +  10219  10281   63  0  0  116   48    91 0.500   4.81
 1.03 PlyA +  10910  10915    6                               1.05

 2.00 Prom +  15058  15097   40                              -5.05
 2.01 Init +  27120  27202   83  2  2   99   60    71 0.589   5.89
 2.02 Term +  28087  28186  100  1  1   85   38   114 0.965   2.72
 2.03 PlyA +  29731  29736    6                               1.05

 3.00 Prom +  30711  30750   40                              -2.85
 3.01 Init +  30967  31021   55  0  1   98   71    33 0.541   4.13
 3.02 Intr +  53768  53838   71  0  2  126   89    69 0.174   8.78
 3.03 Intr +  80579  80612   34  1  1  144   42     9 0.003  -1.22
 3.04 Term +  83082  83200  119  1  2  102   42    65 0.153   1.02
 3.05 PlyA +  84124  84129    6                               1.05

 4.00 Prom +  92829  92868   40                              -3.75
 4.01 Sngl + 100001 100963  963  1  0   83   32  1112 0.986 101.52
 4.02 PlyA + 101431 101436    6                               1.05

 5.00 Prom + 101615 101654   40                             -10.75
 5.01 Init + 102417 102492   76  2  1   53   44   116 0.616   5.00
 5.02 Intr + 104239 104299   61  2  1   81  100    55 0.652   2.87
 5.03 Intr + 105210 105616  407  0  2   88    9   253 0.048  10.47
 5.04 Intr + 108381 108589  209  1  2   65   81   105 0.058   5.37
 5.05 Term + 112170 112331  162  2  0   70   43    73 0.237  -2.05
 5.06 PlyA + 112493 112498    6                               1.05

 6.00 Prom + 114357 114396   40                              -2.75
 6.01 Init + 123154 123249   96  0  0   68   31   179 0.727  10.56
 6.02 Intr + 127819 128045  227  0  2   88   59   120 0.280   4.96
 6.03 Term + 136499 136574   76  2  1  106   44    64 0.035   0.13
 6.04 PlyA + 136691 136696    6                               1.05

 7.08 PlyA - 137026 137021    6                               1.05
 7.07 Term - 140319 140149  171  0  0   38   47   115 0.525  -0.76
 7.06 Intr - 142034 141863  172  1  1   -7   78   117 0.490   0.22
 7.05 Intr - 142551 142444  108  2  0   88  103    27 0.460   2.68
 7.04 Intr - 152148 151955  194  0  2   63   74   113 0.030   4.77
 7.03 Intr - 164787 164566  222  0  0   56   70   161 0.511   8.50
 7.02 Intr - 166174 165975  200  2  2   85   36    61 0.266  -1.25
 7.01 Intr - 167035 166884  152  0  2   40   74    95 0.019   2.19

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  31885  32072  188  2  2   25   41   176 0.944   3.27
S.002 Init -  45995  45857  139  2  1   49   94   100 0.928   7.05


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815582f:51545818_51746777|GENSCAN_predicted_peptide_1|81_aa
MSIKTGFIKALCLQGTEICSEQLKHTRDIFERMQGYLPEGDMNGNQDWASQEQKYFSVSP
RVLRQAALAIGEKTGEIRITG

>gi568815582f:51545818_51746777|GENSCAN_predicted_CDS_1|246_bp
atgtccatcaagactggcttcatcaaggctctttgcttacaaggaacagaaatctgctca
gaacagctcaagcataccagagatatttttgaaaggatgcaaggatatctcccagaagga
gatatgaatgggaatcaggactgggcaagtcaggaacagaagtacttcagtgtttctcct
agggtgctcaggcaagctgcccttgccataggagagaaaactggagagattagaataacg
ggttga

>gi568815582f:51545818_51746777|GENSCAN_predicted_peptide_2|60_aa
MAKGCVVQYGTSPHFFKASEKLLTEAVRLQATSDEEYHSLILPIDQESKTLISTAAKKTA

>gi568815582f:51545818_51746777|GENSCAN_predicted_CDS_2|183_bp
atggcgaaaggctgtgtggtgcaatatggcacctctccacacttcttcaaggcttcagag
aaattactgaccgaggctgtcagactgcaagcaacatctgatgaggaatatcattccttg
attttgcccatagatcaagaatccaaaactttaatttccacagctgccaaaaagacagca
taa

>gi568815582f:51545818_51746777|GENSCAN_predicted_peptide_3|92_aa
MGHILFNGGRRYFLAESSASPLPDSASALSQLLSEVGSNLTVIESIVILLTGTRGCRVCG
RVLQVFADYKVTSCTNTGYLNHHVEMHLLNIQ

>gi568815582f:51545818_51746777|GENSCAN_predicted_CDS_3|279_bp
atgggccatatcctgtttaatggtggccgcagatatttcctggctgagagctcagcatca
cctctgccagactcagcaagtgccctgtctcagcttctcagcgaagttggatctaatctc
acagtgatagagtccattgtcatccttttgactgggacaagaggatgccgagtatgtggt
agagtactccaagtctttgcagattacaaagtcaccagttgtaccaacactgggtatttg
aatcaccatgtagaaatgcaccttctgaacatccagtag

>gi568815582f:51545818_51746777|GENSCAN_predicted_peptide_4|320_aa
MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFV
TYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPDAHLTVKKIFVGGIKEDTEEHH
LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA
LSKQEMASASSSQRGRSGSGNFGGGRGGGFGGNDNFGRGGNFSGRGGFGGSRGGGGYGGS
GDGYNGFGNDGSNFGGGGSYNDFGNYNNQSSNFGPMKGGNFEGRSSGPHGGGGQYFAKPR
NQGGYGGSSSSSSYGSGRRF

>gi568815582f:51545818_51746777|GENSCAN_predicted_CDS_4|963_bp
atgtctaagtcagagtctcctaaagagcccgaacagctgaggaagctcttcattggaggg
ttgagctttgaaacaactgatgagagcctgaggagccattttgagcaatggggaacgctc
acggactgtgtggtaatgagagatccaaacacgaagcgctccaggggctttgggtttgtc
acatatgccactgtggaggaggtggatgcagctatgaatgcaaggccacacaaggtggat
ggaagagttgtggaaccaaagagagctgtctccagagaagattctcaaagaccagatgcc
cacttaactgtgaaaaagatatttgttggtggcattaaagaagacactgaagaacatcac
ctaagagattattttgaacagtatggaaaaattgaagtgattgaaatcatgactgacaga
ggcagtggcaagaaaaggggctttgcctttgtaacctttgacgaccatgactccgtggat
aagattgtcattcagaaataccatactgtgaatggccacaactgtgaagttagaaaagcc
ctgtcaaagcaagagatggctagtgcttcatccagccaaagaggtcgaagtggttctgga
aactttggtggtggtcgtggaggtggtttcggtgggaatgacaacttcggtcgtggagga
aacttcagtggtcgtggtggctttggtggcagccgtggtggtggtggatatggtggcagt
ggggatggctataatggatttggtaatgatggaagcaattttggaggtggtggaagctac
aatgattttggcaattacaacaatcagtcttcaaattttggacccatgaagggaggaaat
tttgaaggcagaagctctggcccccatggcggtggaggccaatactttgcaaaaccacga
aaccaaggtggctatggcggttccagcagcagcagtagctatggcagtggcagaagattt
taa

>gi568815582f:51545818_51746777|GENSCAN_predicted_peptide_5|304_aa
MQGPELLFLKPLTATGPLQLNVRSSARGQSAMSLCGALQSVVNALRAVRTFLRCVDQDAR
WTSPHPPNQSVPPGAIQLTAAERTAPAEKGSIISLWQETAAQLWRGQLACSQLEQWGAAT
DASRPRDAPNRSLLLMGGFLLPCPGNLAALPAARVGWGWVWLLSWKESSIISANQRSGAC
RSCSQDSTMAGFLGSTDFVLDYFLSEVVGCKFGTAEGHGYSLSLKVEETHMAMIRDTDHC
LETSGTKSQLPLLPVLASLLTEPKVHVGFAEQTEVIDQTSSRQLGFHPTDLRENALLVFC
FLMQ

>gi568815582f:51545818_51746777|GENSCAN_predicted_CDS_5|915_bp
atgcaaggacctgagcttctcttcctcaagcccctcacagcgactgggcctttacaactc
aatgttcgaagctctgcccggggacagtctgccatgtcactttgtggtgcattacaaagt
gtagtcaatgcgctaagggctgtgcggactttccttcgctgcgtggatcaggatgcaaga
tggacttccccccaccctccgaatcagtctgttcctcctggggccattcagctgacagct
gcggaaaggacagcgcctgctgaaaaagggtccataatttccctctggcaagagacggca
gcccaactttggaggggacaattagcgtgctctcagctggaacaatggggagcagcaaca
gatgcttctcgtcccagggacgctccgaaccgcagcctcctgctaatgggaggctttctt
cttccctgcccgggaaacctggcagccttgccagcagctcgggtagggtgggggtgggtt
tggctgctgagctggaaggagagcagcattatcagcgcaaaccagaggagcggggcctgc
aggagctgctctcaggactccaccatggcgggctttctgggaagcactgactttgtcttg
gattacttcttgagtgaggttgtggggtgcaaatttgggacggcagaggggcatggttac
tcactctcactgaaggtagaagagacccacatggcaatgatcagggatactgaccactgc
ttggagacctctggcaccaagtctcagcttccattgcttccagtcttggcatccctgttg
acagagccgaaagtacacgttggctttgctgagcaaacagaggtaattgatcagacaagt
agccgacagcttggcttccatcccacagatcttcgggagaatgctttgcttgttttctgt
tttctgatgcagtaa

>gi568815582f:51545818_51746777|GENSCAN_predicted_peptide_6|132_aa
MEGRKEGEKEREREREKKKKEKEEEEEEEEDEIGILTTHLHLWPKLTQTVPPFTLSPGTL
YLVHSVFLTPTHSSKLRSSPTSLKCSLTILDLVDSESDLGGLPFGYIRKYYKAIIIGRSK
ECDSQNRRKKSL

>gi568815582f:51545818_51746777|GENSCAN_predicted_CDS_6|399_bp
atggagggaaggaaggaaggagaaaaagagagagagagggagagagagaagaagaagaaa
gagaaagaggaggaggaggaggaggaggaggacgaaattggtattctcactactcacctt
catctctggcccaagctcacccaaactgtgccaccatttacgctgtctcctggaacactc
tacctggtccactctgtctttcttactcctacccattcttcaaaactcagatctagtccc
acttctctgaagtgttccctgacaattctagacctcgttgattctgagtctgacttaggt
ggtctcccctttggctatatcaggaaatattacaaagccatcatcataggaagaagcaaa
gagtgtgacagccaaaatcgtagaaaaaaatcactgtag

>gi568815582f:51545818_51746777|GENSCAN_predicted_peptide_7|406_aa
XTLGLREATFQQQSAGVESLCLLMEDNRKPSSGSPFNKIASCNGEKTNLESVGLASFVLS
GCQDHIRAFIRGKSFRKEKTLRKAGDSEDPGGVFEYIPLLQDFFKWSFQPGVSPEGKQVR
GGARNVSNQQSGEDVAAASGPHIEESRFQLIRPHPCCLPVLPQTGAQRLKSSSWLWPIRS
CQCVLELRSHHLGSPALQEQSQSYNTAASIKLFSSTTSLLLNYFVSKAKNLPRLSPNVEI
RLPCTINTPVSDVRLTWEYFTFFLIRDSDNLKDSKIWKQHLQVPALVYIKQHRNRRSSQY
KESSKEQFEKSASKSEAFTSNPPLSNATCKNLSRIIFFVTEEGITQLSTEVGVKGPTILV
CLEMKHFQGHGNFRANTSKVPGKAGQSVTLGGDLFLWRFESIESHD

>gi568815582f:51545818_51746777|GENSCAN_predicted_CDS_7|1221_bp
nngactctgggtctgagggaggccaccttccaacagcaatctgctggtgtggaaagcctt
tgccttttgatggaggataacaggaagcccagcagtggcagcccctttaataagatagcc
tcatgcaatggagagaaaacaaacttagaatcagtgggcttggcttcctttgttctgagt
ggttgtcaggatcacatcagagcttttattcgcgggaagagctttagaaaggaaaagacc
cttaggaaggcaggggattcagaagacccaggtggcgtctttgaatatatccctctcctt
caggatttttttaagtggagttttcagccaggtgtctccccagagggcaagcaggtccgg
ggaggggcccgaaatgtttctaaccagcaatcaggtgaggatgtagctgctgcttcagga
ccacacattgaggagtcacgatttcagctcattcgccctcacccctgctgccttcctgtg
ctgcctcagaccggggctcagaggcttaaatccagttcatggctctggccaatcaggtcc
tgccaatgcgtgctggaattgcggtctcatcaccttggtagccctgctctgcaggagcag
tcacagagctataacactgctgcctcaataaagctgttttcttctactaccagcttgctc
ctgaattatttcgtgagcaaagccaagaaccttcccaggctaagccccaatgtggagatt
cgcctgccctgtaccattaatacccctgtgtctgatgtgaggctgacttgggaatatttc
actttctttcttattagagattctgataatttgaaagacagtaaaatctggaaacagcat
ctgcaagtgccagcactggtgtatattaagcagcacaggaataggaggagttctcagtat
aaggagagcagcaaagaacagtttgaaaaatctgcatccaagtctgaagcttttacatca
aatccacctttatcaaatgctacctgtaaaaatctatctagaataattttctttgtaacc
gaagaaggtattactcagctttccactgaggtgggagtaaaaggacctaccatcctggtg
tgcctggaaatgaaacacttccagggacatgggaattttagggcaaataccagtaaggtc
ccaggcaaagcagggcagtcagtcactctaggtggtgacctgttcttgtggagatttgaa
tctatagaaagccatgattaa